Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001307845.1_202015-10- 07] 34 sequences; 9,136,308 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq12 603 1e-167 seq1 365 6e-96 seq7 161 1e-34 seq2 123 3e-23 seq4 105 9e-18 >seq12 Length=161282 Score = 603 bits (668), Expect = 1e-167 Identities = 1112/1605 (69%), Gaps = 43/1605 (3%) Strand=Plus/Plus Query 195295 TCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGA 195354 || |||||||||||| |||||||| || || ||||||||||||||||||||| ||| || Sbjct 146994 TCCAGCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAACGA 147053 Query 195355 TCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTT 195414 | |||||| ||| | || || || ||||| ||||||||||| ||||| || || || || Sbjct 147054 TACTGTAGATATTGTTCCAAACGATCAAGGTAACCGTACAACACCATCATATGTAGCATT 147113 Query 195415 TACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTAT 195474 ||| || | ||| ||||| |||| ||||| ||||| ||||| |||| || || Sbjct 147114 TACTGAAACTGAGCGTCTTATTGGTGATGCAGCAAAGAATCAAGTTGCTAGAAATCCAGA 147173 Query 195475 CAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCA 195534 || || || ||||| || || |||||||||||| | |||||| ||| || ||| || Sbjct 147174 AAACACAGTTTTTGATGCTAAACGTCTTATTGGTAGAAAGTTTGATGATCAGGCAGTACA 147233 Query 195535 AGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGAT 195594 | ||||| | ||||| | | | |||| ||| ||| |||||||| || || Sbjct 147234 AAGTGATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGATAAGCCAATCAT 147293 Query 195595 TAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGT 195654 | ||| | | ||||| ||||| |||| | | ||||||||||| ||||||| Sbjct 147294 CAGTGTAAACTACTTAGGTGAAAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGT 147353 Query 195655 GTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGT---AAAACTGTGAAAGATGC 195711 || ||||||||||| | | ||| | | | ||||| ||| | || |||| Sbjct 147354 TTTACAAAAGATGAAGGAAATCTCTGAAGCATACTTGGGTCGCCAAA---TTAAGAATGC 147410 Query 195712 AGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGC 195771 || || ||||| || ||||| |||| ||| |||||||| || || |||||||| || | Sbjct 147411 TGTAGTTACTGTTCCAGCTTATTTCAATGACTCACAACGTCAAGCAACAAAGGATGCAGG 147470 Query 195772 TGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTG 195830 ||| ||||| ||| | || ||| | ||||| || || || ||||| || ||||| |||| Sbjct 147471 TGCAATTGCTGGTTTGAA-TGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTG 147529 Query 195831 CTTATGGTCTGGACAAGAACAAGGAC-GAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889 |||||||||| || ||||| | | || | || | ||||||||||||||| ||| | ||| Sbjct 147530 CTTATGGTCTTGATAAGAA-AGGAACTGGCGAGAGAAATGTATTGATCTTCGATTTAGGT 147588 Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949 |||||||| |||||||| ||| | | | |||||||| |||||| || ||||| || ||| Sbjct 147589 GGTGGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTTAAAGCT 147648 Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATT-T 196008 || |||||||||||||| | |||||||||||||| ||| | || | | ||| | Sbjct 147649 ACCGCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAACAGACTCGT--GGAATTCT 147706 Query 196009 GTCT-GATGAGTTCCGTCGAAAGAATA-AG--AAAGATATTTCTGGAAATCCTAGGGCTC 196064 || | | || ||| ||||||||| || | ||| | || |||| |||| ||| Sbjct 147707 GTGTACAAGATTTCAAGAGAAAGAATAGAGGTATGGATTTAACTTCAAATGCTAGAGCTT 147766 Query 196065 TTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAA 196124 | | | || || ||| |||||| ||||| || ||||| | || ||| | ||||| Sbjct 147767 TAAGAAGACTCAGAACTCAATGTGAGCGTGCAAAGAGAACTTTGTCATCTTCTACTCAAG 147826 Query 196125 CAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACA---ACTATTACCC 196181 | | ||||| | ||||| | | ||| || ||||| ||| || | || | Sbjct 147827 CTACAATTGAGTTAGATTCACTCTATGAGGGTATTGA---TTATTCAGTTGCCATCAGTA 147883 Query 196182 GTGCACGTTTTGAAGAGTTAAACTCTGATTTGTT--TAGGAAGTGTATGGAACCTGTTGA 196239 | || | || ||||| | | |||||| || | || | || | || ||||| Sbjct 147884 GAGCCAGATTCGAAGAACTCTGCGCTGATTACTTCCGTGCAACTTTA--GCTCCAGTTGA 147941 Query 196240 ACAAGTACTTCGTGACGCAAAGATGGATAAG---TCTAAGGTTGATGAAATTGTCCTTGT 196296 ||||||| || || ||||| ||| ||| || |||| |||| | || Sbjct 147942 GAAAGTACTCAAGGATGCTGGTATGGACAAGAGATCT---GTACATGATGTTGTATTGGT 147998 Query 196297 GGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAA 196356 || || || || |||||||| ||| |||| || || ||||| || ||| Sbjct 147999 TGGTGGTTCTACACGTATTCCAAAGGTTCAGGCCTTGATTCAGGAATTCTTTAACGGTAA 148058 Query 196357 AGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGC 196416 ||| | |||| | ||||| || |||||||| |||||||||||||| || || || || Sbjct 148059 AGAGCCATGCAAAGCAATCAATCCAGATGAAGCTGTTGCTTATGGTGCTGCTGTACAAGC 148118 Query 196417 TGCTATTCTCTCAGGTGTTGA-CAAT--AATAACGTCCAAGATCTTCTGCTACTTGATGT 196473 ||||| ||| | || ||| |||| | ||| || ||||| | || | ||||| Sbjct 148119 TGCTA---TCTTAAATGGTGAGCAATCCTCTGCCGTACAGGATCTCTTATTATTGGATGT 148175 Query 196474 TGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAG 196533 ||| || |||| || ||| | ||||| || |||||||||||||| || ||||||| | Sbjct 148176 TGCTCCATTATCACTCGGTTTAGAAACTGCTGGTGGTGTTATGACCAAGCTTATTGAACG 148235 Query 196534 GAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACC 196593 || |||||||| || | |||||| ||||||||| | || ||| | ||||| || Sbjct 148236 TAATACAACTATCCCAGCAAAGAAGACACAAGTCTTCACTACTTATGCTGATAACCAGAG 148295 Query 196594 AGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACT 196653 ||||| || ||||| ||||| || || | || | |||||||||||||| || Sbjct 148296 CGGTGTCTTGATCCAAGTTTATGAGGGTGAGAGAGCCATGACTAAGGATAACCATCTCCT 148355 Query 196654 TGGAACTTTCGAT-TTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATG 196712 |||| ||| || |||| || |||||| | ||||| |||||||| ||||| ||| | | Sbjct 148356 CGGAAAGTTCCATCTTGA-TGGTATTCCACCAGCACCAAGAGGTGTACCACAAATTGAAG 148414 Query 196713 TTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTG 196772 | || ||||| || || ||||| || | || || | |||| || || ||| Sbjct 148415 TCACTTTTGATATTGATGCTAATGGTATCTTGAATGTATCTGCTGTTGATAAAAGCACTG 148474 Query 196773 GCAA-ATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATT 196831 | || | | | ||||| ||||| || || ||||| | | || ||||| || ||| Sbjct 148475 GTAAGAGCAG-CAAGATCACTATTACTAACGATAAGGGTAGATTATCAAAGGACGATATT 148533 Query 196832 GAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAG 196876 |||||||||||| | ||||| || || |||| || || || ||| Sbjct 148534 GAACGTATGGTTAATGATGCTGAGAAATACAAGGGTGAGGATGAG 148578 >seq1 Length=1279005 Score = 365 bits (404), Expect = 6e-96 Identities = 1049/1580 (66%), Gaps = 64/1580 (4%) Strand=Plus/Plus Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357 || |||||||||||||||||| |||||||| |||||||||||| | | | |||| | | Sbjct 85959 AGTTATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAG 86018 Query 195358 TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417 ||||||||||| || ||||| ||||| || |||| || ||||| || || | || || Sbjct 86019 AGTAGAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCAC 86078 Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAA 195477 ||| |||| | | |||| || | || || ||||| | |||| || || | | Sbjct 86079 TGATGATGAGAGATTGATTGGTGAATCAGCCAAGAATCAAGCTACTATCAATCCAGTTCA 86138 Query 195478 TACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGA 195537 ||| | || |||| ||| | ||||||||||| ||| |||| | |||||| | Sbjct 86139 GACTTTGTTCGACGTAAAGAGACTTATTGGTCGTCGTTTTAAGGATGATTCTGTCCAAAA 86198 Query 195538 CGATATAAAGGACTGGT---CTTATGAAGTTGTTCCCGGTG-TGGCTGATAAGCCTATGA 195593 |||| || | || | ||||| || || | | | || |||||| | Sbjct 86199 GGATA---AGACTTTGTTACCATATGAGATTATTAACAAAGATAGC----AAGCCTTACA 86251 Query 195594 TTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGG 195653 | | ||| || | ||||||||||| ||||| || || ||||| |||| |||||| Sbjct 86252 TACAAGTTTCTGTTAAGGGTGAGAAGAAGCAATTAGCCCCAGAAGAGGTTTCCGCTATGG 86311 Query 195654 TGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAG 195713 | ||| | |||||||| || | ||| || ||| | ||||| || || |||||| Sbjct 86312 TCTTGCTCAAGATGAAAGAAATTGCTGAGGCTTATCTCGGTAAGGAAGTAAAGCATGCAG 86371 Query 195714 TTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTG 195773 | | ||||| || |||||||| | |||| | || || ||||| || ||||| |||| || Sbjct 86372 TAATTACTGTCCCAGCTTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGTG 86431 Query 195774 CTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCT 195832 ||||||| ||| | || ||| | | ||||| ||||| |||||||| || ||||||||| Sbjct 86432 CTATTGCTGGTTTGAA-TGTAATCCGTATTATTAATGAGCCAACAGCAGCAGCAATTGCT 86490 Query 195833 TATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGT 195892 | |||| |||| ||||| || ||||| | | || | | ||| | |||||| Sbjct 86491 TTTGGTTTGGATAAGAAAGCTGA-GAAGAGCA-----TTTTAGTATACGATTTGGGTGGT 86544 Query 195893 GGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACT 195952 ||||| |||||||| || || | | ||||| || | ||||| || ||||| Sbjct 86545 GGTACTTTTGATGTTTCTCTCTTGACCATTGATAACGGCGTTTTCGAGGTCGTTGCTACA 86604 Query 195953 GCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGTC 196011 ||||||||| ||| | || ||||| ||||||||| | || | || ||| || Sbjct 86605 AGTGGTGATACCCATTTGGGAGGTGAGGATTTCGATCAGAGAGTTATGGACCACTTTATC 86664 Query 196012 -TGATGAGTTCCGTCGAAAGAATAAGAAA-GAT---ATTTCTGGAAATCCTAGGGCTCTT 196066 ||| | | ||| |||| | | |||| ||| | |||| || || || ||| Sbjct 86665 AAGATCA-TCAAGTC-AAAG-ACAGGAAAGGATGTAAAGTCTGACAA---GAGAGCCCTT 86718 Query 196067 CGTCGGCTTAGGACTGCATGT-GA-ACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAA 196124 | |||||| | | | || || | || | || || | || ||||| | | ||| Sbjct 86719 CAGAAGCTTAGAAGAG-AGGTCGAGAAGT-CGAAGAGAGCCCTTTCTTCAGCTCCACAAG 86776 Query 196125 CAATGGTTGAGATTGATTCGTTGTTTGACGGA--ATTGACTTCTATAC--AACTATTACC 196180 | ||| |||||||| |||||| ||| || | ||| | ||| | ||| Sbjct 86777 TTAAGGTCGAGATTGA----AGGTTTGATGGAGGATGTAGATCTGAGCGAAACCTTGACC 86832 Query 196181 CGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAA 196240 | || || || ||||| || |||| ||||| || ||| ||| || || ||| || Sbjct 86833 AGAGCTAAGTTCGACGAGTTGAATGCTGACTTGTTCAGAAAGACTATCGAGCCAGTT-AA 86891 Query 196241 CAAGTACTTCG-TGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGG 196299 ||| || | || || || | |||||| | || ||||| || || | || || Sbjct 86892 GAAGGTTTTGGAGGATGCTGGAATCAAAAAGTCTGAAGTAGATGAGATCGTTTTGGTAGG 86951 Query 196300 AGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAG--CTTCTTCAATAATAAA 196357 || || || ||||| || ||||||||| || || || ||||| || || Sbjct 86952 TGGTTCTACTCGTATCCCTAAGATTCAAGCCTTG--ATCAAGGAGTTCTTTGATGGAAAG 87009 Query 196358 GATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCT 196417 || ||||| | || ||||| |||||||| || ||||||||||| ||||| || ||| Sbjct 87010 GAGCCAAACAGAGGAATTAACCCAGATGAAGCCGTCGCTTATGGTGCTGCCGTACAAGCT 87069 Query 196418 GCTATTCTCTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCA 196477 | ||| | |||||| || | || ||| | | || | |||||| | Sbjct 87070 GGTATCTTAGCAGGTG--------AAGGAGGT-AGTGATTTATTATTATTGGATGTTACT 87120 Query 196478 CCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAAC 196537 || || | | ||| |||| || | ||||| |||||||| || | |||| ||| ||| Sbjct 87121 CCTTTAACTTTAGGTATTGAGACTGTTGGTGGAGTTATGACAAAGCTCATTGGTAGAAAC 87180 Query 196538 ACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCA--ACGTATTCCGATAATCAACCAG 196595 || | |||| || |||||| |||| |||||| || || |||||||| |||| Sbjct 87181 ACTGTTGTTCCAACCAAGAAGAGCCAAG--TTTTCAGTACTTACCAAGATAATCAGCCAG 87238 Query 196596 GTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTT 196654 ||| | ||| || || ||||| || || || ||| || | ||||||||| | || || Sbjct 87239 CTGTACTTATCCAGGTTTATGAGGGTGAGCG-TCCAATGACTAAGGATAACAACCTCCTC 87297 Query 196655 GGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTT 196714 |||| ||||| | | || || ||| | || || ||||||||||| || ||| | ||| Sbjct 87298 GGAAAATTCGAGCTTTCTGGAATCCCACCAGCTCCAAGAGGTGTTCCCCAAATTGAGGTT 87357 Query 196715 TGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGC 196774 || || || || | |||| ||| || | || | || |||| |||| | |||| Sbjct 87358 ACTTTTGAAATTGATACTGATGGTATTTTACAAGTTAGTGCAAAGGATAAGGGTACTGGT 87417 Query 196775 AAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAA 196834 ||||| || |||||| || || ||||| ||||| | || || |||| || || || Sbjct 87418 AAATCCGAGAAGATTACTATCACAAATGATAAGGGTAGACTCTCACAGGAAGACATAGAG 87477 Query 196835 CGTATGGTTCAAGATGCGGA 196854 |||||| || | || || || Sbjct 87478 CGTATGATTAAGGAGGCTGA 87497 >seq7 Length=900255 Score = 161 bits (178), Expect = 1e-34 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 171861 TATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920 |||||| || ||||| || || | || ||||| |||||||| | || ||||| | || Sbjct 543942 TATGCAGATTTTTGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTC 544001 Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980 ||| ||||| || || | || || |||||||| ||||||||||| || ||||| ||||| Sbjct 544002 AGATACAATTGAGAATGTTAAGGCAAAGATTCAGGATAAGGAAGGAATCCCACCTGATCA 544061 Query 171981 GCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAA 172040 ||||| | || ||||| || ||||| | || ||||| | || ||| |||||||||| Sbjct 544062 ACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAA 544121 Query 172041 CGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | ||||||| ||||| ||| ||||| | || | || ||| | |||||| Sbjct 544122 CATTCAAAAAGAGTCCACTTTACACTTAGTCTTGAGACTTAGAGGTGGT 544170 Score = 159 bits (176), Expect = 5e-34 Identities = 175/233 (75%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| || ||||| || || | || ||||| |||||||| | || ||||| Sbjct 544166 GTGGTATGCAGATTTTTGTCAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAAC 544225 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| ||||| || || | || || ||||||||||||||||| || || ||||| | Sbjct 544226 CTTCAGATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAGGGAATCCCACCTG 544285 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 |||| ||||| | || ||||| || ||||| | || ||||| | || ||| |||| | Sbjct 544286 ATCAACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGACT 544345 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| ||||||| ||||||||| |||| | || | ||||| | |||||| Sbjct 544346 ACAACATTCAAAAAGAGTCTACTTTACATTTAGTATTGAGGCTCAGAGGTGGT 544398 Score = 152 bits (168), Expect = 7e-32 Identities = 173/232 (75%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| || || || || || | || ||||| |||||||| | || ||||| Sbjct 544394 GTGGTATGCAGATTTTCGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAAC 544453 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| ||||| || || | || || |||||||| ||||||||||| || ||||| | Sbjct 544454 CTTCAGATACAATTGAGAATGTTAAGGCAAAGATTCAGGATAAGGAAGGAATCCCACCTG 544513 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 |||| ||||| | || ||||| || ||||| | || ||||| | || ||| |||||| Sbjct 544514 ATCAACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATT 544573 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| ||||||| ||||| ||| ||||| | || | || ||| | || || Sbjct 544574 ACAACATTCAAAAAGAGTCCACTTTACACTTAGTCTTGAGACTTAGAGGCGG 544625 >seq2 Length=1244090 Score = 123 bits (136), Expect = 3e-23 Identities = 1152/1831 (63%), Gaps = 50/1831 (3%) Strand=Plus/Plus Query 77870 GACTTTGAATTTGGGTATTTTGGATTGAAGACTCTCGAAAAAAGTTACCTGCAGTACATG 77929 || ||||||| || ||||||| || || ||||| |||| | || || | | || Sbjct 371753 GATTTTGAATATGATTATTTTGCCTTCAAAACTCTAGAAAGATCCTATCTTCTTAAAATT 371812 Query 77930 GATGGAAAGCTCATGGAGACACCTCAATACTTATTCATGCGTGTTTCTATTGGTATTCAT 77989 || || | |||| | ||| ||| | | | ||||| |||||| |||||||||| Sbjct 371813 GACAACAAAGTTGTGGAAAGACCACAACATCTTCTGATGCGGGTTTCTTGTGGTATTCAT 371872 Query 77990 GGAAATGATATTCCAGCGGTACTTGAAACGTATGATAAAATGTC-CAATGGTATGTTTAT 78048 | ||||||| ||| | ||||||||| ||||| | || ||| ||| |||| Sbjct 371873 TGTGGTGATATTGAAGCTGCACTTGAAACATATGAGTTGTTATCGCAAAAATAT-TTTAC 371931 Query 78049 TCACGCAACACCTACTTTGTTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTT 78108 ||| |||||||| || | |||||| |||| || || || || || |||||||||||||| Sbjct 371932 TCATGCAACACCCACACTCTTTAATTCAGGCACGCCGCGACCTCAAATGTCATCTTGTTT 371991 Query 78109 CCTACTTGCAAATAAGGAGGACTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGC 78168 |||| | | || || || || || ||||| | | || || || | || || Sbjct 371992 TTTACTCAGGATTCCAGAAGATTCAATAAACGGTATCTTTGACACACTAACTAAATGCGC 372051 Query 78169 TCAGATTTCTAAGTGGGCTGGTGGTATAGGTCT-TCA-TATTCACGATGTTCGTGCAAAC 78226 | ||| |||| || ||||| | || | || || | || || | | ||| Sbjct 372052 AAACATTAGTAAGACTGCAGGTGGCCTTGGGGTGGCAGTAAGTA--ATATTAGAG-GAAC 372108 Query 78227 AAGTCCA-GGATTAGAGGAACTAATGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGT 78285 || || ||| ||||||| ||||| ||| ||||| | ||||| ||||| | || Sbjct 372109 TGGTTCATATATTCGAGGAACAAATGGGAGATCTAATGGATTAATTCCGATGCTGCGCGT 372168 Query 78286 ATTCAATGCTACAGCACGCTATGTCAACCAAGCGGGTCGTAGG----AAGGGGTCATTCG 78341 | |||| || || | ||| | | |||| || | | | |||| | |||| | Sbjct 372169 TTATAATGACACTGCTAGGTATATTGATCAAGGTGGAGGGAAGCGTAAAGGTGCCATT-G 372227 Query 78342 CTATGTACCTTGAACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACC 78401 | || || | ||||| ||||||| ||||| | || ||| | ||| || | || | Sbjct 372228 CAATTTATTTGGAACCATGGCACGTTGATGTTGTAGAGTTTATTGAAATTAGGAAGAATC 372287 Query 78402 AGGGTGACGAGGAAGCTCGATGCAGGGATTTATTCACTGCTATGTGGATTCCGGATCTTT 78461 | || | || || |||| | ||| | || |||| | ||| |||| ||||| | Sbjct 372288 ATGGAAAGGAAGAGATGAGATGTCGCGATCTCTTTCCTGCCCTTTGGGTTCCTGATCTGT 372347 Query 78462 TTATGAAGAGAGTTGAGGAAGGAGGTA-AATGGTCTCTTTTCTGTCCAGATAAGACTAAG 78520 | ||| | |||||||| |||||| | | ||| |||| | || |||||| | | || Sbjct 372348 TCATGGAAAGAGTTGA-GAAGGATCAAGATTGGACTCTAATGTGCCCAGATGA-ATGCAG 372405 Query 78521 GGTCTTTC-AGATGTATACGGGGAAGAATTCGAAAAATTGTACACTAAATACGAAGAGGA 78579 || || | |||||| | || || || || | || | || | || || | | Sbjct 372406 GGGATTGCAAGATGTTTGGGGCGATGATTTTAAGAAGCTATATGAAGAGTATGAGAAACA 372465 Query 78580 AGGTCTCGCTATTAAGACAATTGATGCATCTGAACTATGGAAAGCTATTATCAAAAG-TC 78638 ||| | | | || || || | || |||| ||| || | | | | | || Sbjct 372466 AGGCCGTGGAAGGAAAACGATGAAAGCGCAGAAACTTTGG-TTCTTAATCTTACAGGCTC 372524 Query 78639 AAACAGAGACCGGCACCCCGTATATGCTATACAAAGACAGCTG-TAACAGAAAGTCTAAC 78697 ||| ||||| || || || | ||| || ||||| |||| || || || |||| Sbjct 372525 AAATTGAGACGGGGACACCATTTATTTGTTATAAAGA-TGCTGCAAATAGCAAAAGTAAC 372583 Query 78698 CAAAAGAACCTAGG---TGTCATCAAAAGCTCTAACCTTTGCACAGAAATTCTGGAATAC 78754 || || || | || | | | ||| |||| | ||||||||||| | |||||| Sbjct 372584 CAGAAAAATTTGGGAACTATTGTTTCAAG---TAACTTATGCACAGAAATCATAGAATAC 372640 Query 78755 ACGGATAAGAATGAAACAGCTGTATGTAATCTAGGGTCTATCGCTCTACCAAAGTTTGTT 78814 || ||| | ||| || || |||||||| | |||||| | || |||||||| ||| Sbjct 372641 ACTAGCAAGGACGAAGTTGCCGTTTGTAATCTGGCGTCTATTGGCCTTCCAAAGTTCGTT 372700 Query 78815 GATCGAGAATTA-AAGACATTTGATTATTCAAAGCTCCACGAAATTACAAAAATCGTAAC 78873 ||| | ||| | ||||| ||||||| | ||| | | ||| |||| || | | || Sbjct 372701 GAT-AAAAATAACAAGACGTTTGATTTTGATAAGTTAAAAGAAGTTACGAAGGTGATTAC 372759 Query 78874 TAAAAATTTAAATCGTGTAATTGACCGTAACTACTA-CCCAGTCGAGACTGCTAAATATT 78932 | ||||| ||| | |||||| | || || | | ||| || || | | | Sbjct 372760 GAGGAATTTGAATAAATTGATTGACGTTGGATATTATTCTCTTAAAGAATG-TACAAACT 372818 Query 78933 CTAATATGAAACATAGACCAATTGGTCTAGGTGTTCAAGGATTGGCAGA-TGTATTCAAC 78991 | ||| | | |||| | ||| | || | || ||||||| | ||||| ||| |||| Sbjct 372819 CGAATTTAAGACATCGTCCATTGGGGATTGGCATTCAAGGGCTCGCAGACTGT-TTCATG 372877 Query 78992 TTGTGTGGTCTTCCCTTCGATTGCGAAGATTCAAGGACTATGAATGCTCATATTTTCGAG 79051 || | || | || | ||| | || | | | || | ||| || || || || Sbjct 372878 ATGCTTCGTATGCCATACGAGTCTGAGGGAGCTAAGAAGTTAAATAAACAAATCTTTGAA 372937 Query 79052 ACTATTTATCATGCAGCTTTAGAAGCAAGTTCAGAACTTGCTGAAATTAATGGGCCTTAT 79111 ||| ||| |||||||| | || || || | || ||||| |||| |||| || || Sbjct 372938 GTTATCTATTATGCAGCTCTCGATGCTAGCTGTGAGCTTGCAGAAAAATATGGTCCATAC 372997 Query 79112 GAGAGTTTCGAGGGTTCACCCGCTTCACAAGGTCTTCTTCAACCAGATCTATGGGAAGGT 79171 || | | ||||| || || | ||| || | ||| ||| | |||| || | Sbjct 372998 GAAACATATTCCGGTTCGCCTGCGAGTAAGGGTATTTTACAATTTGATATGTGGGGAGTT 373057 Query 79172 GAAGCTAAATACAGTGGTCGTTACGATTGGGATGCAATGAGAAAGCGTGTAATGACGA-- 79229 | | | || ||| | || ||||||||| | | |||| | | | | | Sbjct 373058 ACACC---AGACTCTGGACTTTGTGATTGGGATTCGCT--TAAAGATAGGATTTCCAAAT 373112 Query 79230 AGGGTCTGAGAAACAGTCTTCTCGTAGCACCAATGCCCACTGCTTCGACGGCTCAGATCC 79289 | ||| | | || ||| | || | |||||||| || || || || | || || Sbjct 373113 ATGGTATTCGTAATTCTCTATTGATATCTCCAATGCCAACAGCATCCACTTCACAAATTT 373172 Query 79290 TCGGTAATAATGAGTGTTTTGAACCATACACTACAAACATATATCTTCGTCGCACATTAG 79349 | ||||| |||||| ||||||| |||| ||| | ||||| |||| |||| | | || Sbjct 373173 TAGGTAACAATGAGAGTTTTGAGCCATTCACCTCGAACATTTATCATCGTAGGGTACTAT 373232 Query 79350 CTGGTGAATTTGTTGTGGTTAACAAACATCTTGTTGAA-GATTT-GAAGAAGTTAGGTCT 79407 ||||||| || |||| || || || |||| | || ||||| ||| || ||| Sbjct 373233 CTGGTGAGTTCTTTGTAGTAAATCCGCA-CTTGCTAAATGATTTACTAGAGCTTGGGTTA 373291 Query 79408 TTGGTCAAAAGAGATGAA--AGACT-TAATGGTCAAAGCCGGAGGGAGTGTGCAAAACAT 79464 | || | || | | || ||| | | || | |||| || ||| | ||||| || Sbjct 373292 TGGGATGATAG-GCTTAAGCAGAATATTATTG-CAAA--TAATGGCAGTATTCAAAATAT 373347 Query 79465 AGTAGAGATACCAGATAATATTAAAAATCTTTATAAGACTGTTTGGGAAATTAGCCAAAA 79524 | | || || || |||| | |||||||||||||| |||||||| | ||||| Sbjct 373348 ACTTACAATTCCGGAGGATATACGTGAGCTTTATAAGACTGTATGGGAAATCAAGCAAAA 373407 Query 79525 ATGTATTATCGACATGGCAGCGGACAGGGGTCGTTTTATCTGTCAATCACAATCTATGAA 79584 | || || ||||| || || ||||||| | | | |||||||| |||||| |||| Sbjct 373408 GACAGTAATTGATATGGCTGCAGATAGGGGTCCATATGTTTGTCAATCGCAATCTTTGAA 373467 Query 79585 TTTGTTTTTAGAGTCACCTACAATTGGAAAAATATCCTCTATGCACATGTATGCGTGGAA 79644 | | | || ||| ||| ||| |||| |||||||| | |||| ||||| Sbjct 373468 CATCCATATGGAAAATGCTAACTTTGCAAAGTTATCATCTATGCATTTTTATGGTTGGAA 373527 Query 79645 GTCTGGACTCAAGACAGGTATGTACTACTTG 79675 || || || ||||| || || || ||| Sbjct 373528 AAAAGGTCTAAAAACAGGCATTTATTATTTG 373558 >seq4 Length=1000321 Score = 105 bits (116), Expect = 9e-18 Identities = 201/296 (68%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 196454 GATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTT 196513 |||||| || |||| || ||| ||||| |||| | ||| ||||||| |||||| ||| Sbjct 757212 GATCTTTTGTTACTCGACGTTACACCCTTATCTTTAGGTATTGAAACTTTGGGTGGAGTT 757153 Query 196514 ATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCA 196573 | ||| | | ||| | || || || || || || ||||| ||| ||||| || || Sbjct 757152 TTTACTCGATTAATTAACAGAAATACCACAATACCCACTAAAAAGAGCCAAGTATTCTCC 757093 Query 196574 ACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGT 196633 || | | || |||||| | ||| ||| |||| | |||||||| | | Sbjct 757092 ACTGCTGCAGACAATCAAACTCAAGTTGGAATTAAAGTTTTCCAAGGAGAAAGAGAATTT 757033 Query 196634 GCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGA 196693 || ||||| | | |||||| || || ||| ||| ||||| | ||||||||| Sbjct 757032 GCTGCTGATAATAAGTTGCTTGGACAATTTGAAATGATGGGAATTCCTCCAGCACCCAGA 756973 Query 196694 GGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGT 196749 || ||||| || ||| | || ||| ||||| || |||||||||||| | || || Sbjct 756972 GGGGTTCCTCAAATTGAAGTCACCTTTGATATTGATGCAAATGGAATTATGAATGT 756917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862120408480