Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001483505.1_202015-12- 30] 506 sequences; 8,861,795 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq115 352 2e-91 seq268 259 3e-63 seq26 242 2e-58 seq14 152 3e-31 seq84 150 1e-30 seq74 141 6e-28 seq19 132 3e-25 seq4 122 6e-22 seq24 120 2e-21 seq7 105 4e-17 >seq115 Length=16705 Score = 352 bits (390), Expect = 2e-91 Identities = 669/974 (69%), Gaps = 27/974 (3%) Strand=Plus/Plus Query 475310 GGAACTCATGACGTAACTTTACTATCACTCGAAGATGGTCTTTTCTCTGTAAGAGCAACA 475369 || ||| ||| ||| | ||| || | | ||||||||| |||| || | ||| || Sbjct 2108 GGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTTAAAGCTACC 2167 Query 475370 GCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGGTGTGTT 475429 ||||| ||| | || | |||||||||||||||||||| ||||| || || ||||| Sbjct 2168 GCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAACAGACTCGTGGAATTCTGTGTA 2227 Query 475430 GAAGATTTCAAGAGGAAAAATAAAGTTGATCTTTCAACATC---TGCTAAAGCATTAAGA 475486 ||||||||||||| || |||| || | || ||| || ||||| ||| |||||| Sbjct 2228 CAAGATTTCAAGAGAAAGAATAGAGGTATGGATTTAACTTCAAATGCTAGAGCTTTAAGA 2287 Query 475487 CGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACT 475546 | || |||||| ||||| ||||| ||| || || | || ||| |||||||| |||| Sbjct 2288 AGACTCAGAACTCAATGTGAGCGTGCAAAGAGAACTTTGTCATCTTCTACTCAAGCTACA 2347 Query 475547 GTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAA 475606 |||| | ||||| || | ||| || ||||||||| | || | || || | | Sbjct 2348 ATTGAGTTAGATTCACTCTATGAGGGTATTGATTATTCAGTTGCCATCAGTAGAGCCAGA 2407 Query 475607 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTC 475666 || ||||| | || ||||| ||| | ||| | | || ||||| |||| ||| Sbjct 2408 TTCGAAGAACTCTGCGCTGATTACTTCCGTGCAACTTTAGCTCCAGTTGAGAAAGTACTC 2467 Query 475667 AGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACA 475726 | ||| || | ||||| | || ||||| |||| | || || ||||| ||| Sbjct 2468 AAGGATGCTGGTATGGACAAGAGATCTGTACATGATGTTGTATTGGTTGGTGGTTCTACA 2527 Query 475727 AGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATG-A 475785 | |||||||| | | || || || ||||| |||||| || | || | Sbjct 2528 CGTATTCCAAAGGTTCAGGCCTTGATTCAGGAATTCTTTAACGGTAAAGAGCCA--TGCA 2585 Query 475786 AAGTG-TAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTAT 475844 ||| | ||||| |||||||||||||| ||||| |||||||| ||||| ||||| ||| Sbjct 2586 AAGCAATCAATCCAGATGAAGCTGTTGCTTATGGTGCTGCTGTACAAGCTGCTATCTTAA 2645 Query 475845 CAGGT---CAATCA---GACG---AGAAACTAAATAATATTGTACTTGTTGACGTAACTC 475895 ||| ||||| | || || | || || ||||| | ||||| ||| Sbjct 2646 ATGGTGAGCAATCCTCTGCCGTACAGGATCTCT-TATTATTGGA--TGTTG------CTC 2696 Query 475896 CACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATA 475955 || | ||| | ||| | ||||| | ||| || ||||||| || |||||||| | |||| Sbjct 2697 CATTATCACTCGGTTTAGAAACTGCTGGTGGTGTTATGACCAAGCTTATTGAACGTAATA 2756 Query 475956 CTCCTATCCCATGCAAAAAAT-CAAAAGTATTTTCCACTTATTCTGATAATCAAACAACT 476014 | |||||||| ||||| || || |||| || | |||||| ||||||| || | | Sbjct 2757 CAACTATCCCA-GCAAAGAAGACACAAGTCTTCACTACTTATGCTGATAACCAGAGCGGT 2815 Query 476015 GTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGA 476074 || |||||| | | ||| ||||| ||| | ||||| ||||| | || ||| Sbjct 2816 GTCTTGATCCAAGTTTATGAGGGTGAGAGAGCCATGACTAAGGATAACCATCTCCTCGGA 2875 Query 476075 ACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACT 476134 | || ||||||| |||||||| || || || ||||| || || ||||||||||| ||| Sbjct 2876 AAGTTCCATCTTGATGGTATTCCACCAGCACCAAGAGGTGTACCACAAATTGAAGTCACT 2935 Query 476135 TTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAACAAG 476194 |||||||||||||| |||||||| | ||||| ||||| ||||||| | | ||| Sbjct 2936 TTTGATATTGATGCTAATGGTATCTTGAATGTATCTGCTGTTGATAAAAGCACTGGTAAG 2995 Query 476195 AGTAAAAATATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGT 476254 || | || || |||||||| ||| || |||||||| | | || | ||| ||||| Sbjct 2996 AGCAGCAAGATCACTATTACTAACGATAAGGGTAGATTATCAAAGGACGATATTGAACGT 3055 Query 476255 ATGGTTGATGAAGC 476268 |||||| |||| || Sbjct 3056 ATGGTTAATGATGC 3069 Score = 280 bits (310), Expect = 1e-69 Identities = 394/551 (72%), Gaps = 3/551 (1%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || ||||||||||||||||| || || ||| ||||| | ||| ||| ||| | || Sbjct 1514 GCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAACGATACT 1573 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 ||||| || || | || || |||||||| | ||||||||||||||||| | |||||| Sbjct 1574 GTAGATATTGTTCCAAACGATCAAGGTAACCGTACAACACCATCATATGTAGCATTTACT 1633 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 |||||||| | ||||||||| ||||| || || |||||| ||| ||||| | || Sbjct 1634 GAAACTGAGCGTCTTATTGGTGATGCAGCAAAGAATCAAGTTGCTAGAAATCCAGAAAAC 1693 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || |||||||||||||| | | |||||| | || ||||||||| | || ||| | Sbjct 1694 ACAGTTTTTGATGCTAAACGTCTTATTGGTAGAAAGTTTGATGATCAGGCAGTACAAAGT 1753 Query 474569 GATATGCGTCATTGGCCTTTTAAGGT-GATAAATGT--TGGTGGTAAACCATATATAGAA 474625 |||||| ||| ||||| ||||| || | || | || | ||| ||| || Sbjct 1754 GATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGATAAGCCAATCATCAGT 1813 Query 474626 GCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685 | || || |||||||| || |||| | ||| |||||||| | ||||||||| Sbjct 1814 GTAAACTACTTAGGTGAAAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGTTTTA 1873 Query 474686 GCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATT 474745 || ||||| ||| | | |||| | || | || | | |||| ||| || Sbjct 1874 CAAAAGATGAAGGAAATCTCTGAAGCATACTTGGGTCGCCAAATTAAGAATGCTGTAGTT 1933 Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 ||||||||||| ||||| ||||| || |||||||||||||| || ||||| || |||| Sbjct 1934 ACTGTTCCAGCTTATTTCAATGACTCACAACGTCAAGCAACAAAGGATGCAGGTGCAATT 1993 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || ||| | ||||| | | || ||||| || ||||| ||||| || ||||||||||| Sbjct 1994 GCTGGTTTGAATGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTGCTTATGGT 2053 Query 474866 CTTGATAAGAA 474876 ||||||||||| Sbjct 2054 CTTGATAAGAA 2064 >seq268 Length=2875 Score = 259 bits (286), Expect = 3e-63 Identities = 685/1027 (67%), Gaps = 62/1027 (6%) Strand=Plus/Minus Query 296689 GGAACTGGTTTTGTGCATATTGCTCCTTCACATGGAGAGGATGATTTCAGAGTTTGTTGT 296748 || |||||| |||| ||||| |||||| | ||| || ||||||| ||||||||| Sbjct 1710 GGTACTGGTATTGTACATATGGCTCCTGCTTTTGGTGAAGATGATTATAGAGTTTGTGTA 1651 Query 296749 CTTAATAATATTATTGATTCGAGAAATACGCGAGGCAATTTAATTGATGTA--ATTGATG 296806 |||| |||||||||| ||| | |||||| |||| || ||| Sbjct 1650 AGTAATGGTATTATTGAT------AATCATGGTACAAATTTACC--ATGTCCTATGGATT 1599 Query 296807 ATGATGGTAAATTTACAAATCAAATTCATGATTATTTTGGTATATATTTTAGGGATGCTA 296866 | |||||| |||||| | | || ||||| || |||| |||| ||| || Sbjct 1598 CTAATGGTAGATTTACTGAACCTGTTAGTGATTTAAAAGGAATATGGTTTAAAGATTCTG 1539 Query 296867 ATAATCTTATTATTAAAGATTTGAAACATAAAAAG-TTATTGTTTGATTTTAAACAATAC 296925 |||| |||||| |||| || ||| | | || ||||| |||| || | | Sbjct 1538 ATAAAATTATTAAACAAGAATTAAAAAAAATCCAGATTATTAACTGATAATACA---TGT 1482 Query 296926 AAACATTCTTATCCTTTTTGTTATAGAACAGATACTCCACTTATTTTTAAAATTTGTTC- 296984 | |||||||||||||| |||| ||| | ||||| || ||| | | | ||||| Sbjct 1481 ATGCATTCTTATCCTTTCTGTTGGAGATCTGATACACCT-TTACAATATAGAGCTGTTCC 1423 Query 296985 TGGTTGGTTTTTAAACGCATCaaatgaaaaattcagagaaaaaatgatgattaataattc 297044 | ||||||| | || | |||| || | ||| ||| | | ||||||||| Sbjct 1422 TTCTTGGTTTATTAATGT------TGAATCTTTAAAAGATAAATTATTAATTAATAATGA 1369 Query 297045 taaaataaattGGATGCCATCAAATAT-TGGTACAAATCAT-TTTGATAATTGGTTACAA 297102 |||| |||||||| ||| || ||| | | ||| | ||| |||||||||||||| Sbjct 1368 AAAAACTAATTGGATTCCA--AATTATGTTAAAGAAAAAAGATTTCATAATTGGTTACAA 1311 Query 297103 TCTTCAGTGGATTGGTGTATTTCAAGAAGTAGATATTGGGGAACACCAATTCCAATTTGG 297162 | | ||||||||| || | | | | | |||||||||||| || || || ||| Sbjct 1310 GATGCTAGAGATTGGTGTGTTAGTCGTAATCGTTTTTGGGGAACACCTATACCTATATGG 1251 Query 297163 AAATCTGATGATGGTGAAGAAATAATTTGTATTGGTTCACTTGAAGAATTAAAAG----- 297217 ||| || ||| | | || | ||||||||| |||||||||||||| Sbjct 1250 GTATCAGAAGATTATACAATTATTAAATGTATTGGTAGTATTGAAGAATTAAAATCTTTA 1191 Query 297218 ------AATTTTCAGGAATTGATAATATTAATGATTTACATATTGATAAAATTGATCAAA 297271 ||||| | || ||| | ||||||||| ||||| | || |||||| | | Sbjct 1190 GCATCAAATTTAAAAGA--TGAAGAAATTAATGATATACATCGTCATTTTATTGATTATA 1133 Query 297272 TAAAAATTCCTTCTCGTAAAGGAAA-----AGGCATG-TTATCTCGTGTTACCGGTGTTT 297325 | |||||||| || | |||||| | || ||| | || | |||| Sbjct 1132 TTGAAATTCCTGATCCAAGAGGAAATAATTATCCACCATTAAAAAGAATTGAAGAAGTTT 1073 Query 297326 TAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTATCCTTTTGAAA 297385 | ||||||||||||||||| |||||||||||||||| ||| ||||||| ||||||| Sbjct 1072 TTGATTGTTGGTTTGAATCTGGTTCTATGCCTTATGCATCTATTAATTATCCATTTGAAA 1013 Query 297386 ATTCCGAAATTTTAGACACTTCACAAGATTATATTGCAGATTTTATAACAGAATCAATTG 297445 || ||| | || | | | | ||| | |||||||||| | ||| | | Sbjct 1012 ATCAAGAATTATTTAATAAT-----ATATT-TCCTGCAGATTTTGTTGGTGAAGGTTTAG 959 Query 297446 ATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCTATATTTAACAAAC 297505 ||||||||||||| ||||||||||| ||| | || | || ||||| ||||| | ||| Sbjct 958 ATCAAACAAGAGGATGGTTTTATACATTAATGGTATTATCAACAGCATTATTTGATCAAC 899 Query 297506 CAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTGATGGACAAAAAATGT 297565 |||| ||||||||| | ||||||| || | ||| ||| ||||||| ||||||||| Sbjct 898 CAGCTTTTAAAAATATTATTGTTAATGGTTTAGTTTTAGCATCTGATGG-TAAAAAATGT 840 Query 297566 CAAAAAG--TAAAGGTAATTATCCTGATCCA-AATATTTTGATGGATAAATATGGTGCAG 297622 ||||||| |||| ||||||||||||||| | || ||| | ||||||||||||||| Sbjct 839 CAAAAAGATTAAA--AAATTATCCTGATCCATTAGATATTG-TTAATAAATATGGTGCAG 783 Query 297623 ATACTTTACGTCTTTATTTATTATCAA--CACCTGTAGTTAAAGCCGAATCAATTAAATT 297680 || ||||| | |||||| | || || |||| || |||| ||| ||| | | | ||| Sbjct 782 ATTCTTTAAG--ATTATTTTTAATTAATTCACCAGTTGTTAGAGCAGAAACTTTAAGATT 725 Query 297681 TGATGAA 297687 | | ||| Sbjct 724 TAAAGAA 718 Score = 214 bits (236), Expect = 1e-49 Identities = 348/494 (70%), Gaps = 18/494 (4%) Strand=Plus/Minus Query 295795 GATGGACCTCCATTTGCTACAGGA--ACTATGCATTATGGACATATTTTAGTCTCAACTA 295852 |||||||||||||||||||||||| || | |||||||| ||||| | | ||| Sbjct 2541 GATGGACCTCCATTTGCTACAGGATTACCA--CATTATGGTCATATACTTGCAGGTACTG 2484 Query 295853 TTAAAGATACCATGACTAGATATTTAACAATGAATGGTTATCAAGTTAATATGGGAATTG 295912 |||||||| | || |||||| ||| || || ||| | | | | || ||| Sbjct 2483 TTAAAGATGTAGTTACAAGATATGCAACTCAAAAAGGATATTATTGTGAAAGAAGATTTG 2424 Query 295913 GTTGGGATTGCCATGGAGTTCCAATTGAA-ATG---TTGGCTaaaaaaaCTATCGGATAT 295968 | ||||||||||||||| | ||| | ||| ||| ||| | |||| || | || Sbjct 2423 GATGGGATTGCCATGGATTACCAGTAGAACATGAAATTG-----ATAAACAATT--AAAT 2371 Query 295969 ATCACAA--AGA-AAGATTTATTGGAATACGGTATTGATCGTCATAATGATATTTGTCGT 296025 ||||||| ||| ||||| | || | | ||||| ||| | ||||||| ||| | Sbjct 2370 ATCACAAGTAGAGAAGATGTTTTAAATAAAGGTATAGATTTTTATAATGAATCATGTAGA 2311 Query 296026 GATATGGTATTAAAATGTACTGATAAATGGTATTCTGATTTTGAGAGAATTGGAAGATGG 296085 || ||||||| || |||| | ||||| | || | |||| ||| ||||||||| Sbjct 2310 TCAATTGTATTAAGATATACTCAAGAATGGAAATCAACTGTTGAAAGAGTTGGAAGATTA 2251 Query 296086 ATTGATATTAATAATGAATATAAAACAATGGATAAAAATTTTATGGAATCTGTTATTTGG 296145 |||||| || |||||| |||||||| |||||| |||||| ||| || |||| ||| Sbjct 2250 ATTGATTTTGATAATGGTTATAAAACTATGGATTTAAATTTCATGCAAACTGTATGGTGG 2191 Query 296146 TCATTTAAACAACTTTATGAAAAGGAAATGATTTTTGAAGGTTATAAAGTTATGCCTTAT 296205 |||||||||||||| ||| || | | ||| | || ||||| ||| ||||| ||| Sbjct 2190 GTATTTAAACAACTTTTTGATCAGAATCTTGTTTATAGAGCTTATAGAGTAATGCCATAT 2131 Query 296206 TCTACTGGTTGCAATACACCATTATCTCATTTTGAGGCAAAACAAAATTATAAAGAGATT 296265 ||||| | || ||||||||||||| ||||||| || |||||||||||| || Sbjct 2130 TCTACAGCATGTGCTACACCATTATCTAATTTTGAATGTAATTTAAATTATAAAGATGTT 2071 Query 296266 ATTGATCCATCTGT 296279 | |||||||||||| Sbjct 2070 AATGATCCATCTGT 2057 >seq26 Length=88800 Score = 242 bits (268), Expect = 2e-58 Identities = 395/559 (71%), Gaps = 10/559 (2%) Strand=Plus/Plus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 |||||||| |||||||| |||||||| ||||| | | | | | ||||||| |||| Sbjct 76171 ATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAGAGTA 76230 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 || || ||| | ||||| ||||||||| | | |||||||||||||| || || ||||| Sbjct 76231 GAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCACTGAT 76290 Query 474452 ACTGA-ACATCTTATTGGAGATGCTGCTAAATATCAAGCTGC-ATCTAATCCTGTTAATA 474509 ||| | || | ||||| || | || || |||||||| | ||| ||||| ||| | | Sbjct 76291 GATGAGAGAT-TGATTGGTGAATCAGCCAAGAATCAAGCTACTATC-AATCCAGTTCAGA 76348 Query 474510 CTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTG 474569 || | || || | || ||| | ||||||||| |||| | ||| |||||||| | Sbjct 76349 CTTTGTTCGACGTAAAGAGACTTATTGGTCGTCGTTTTAAGGATGATTCTGTCCAAAAGG 76408 Query 474570 ATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCAA 474629 ||| | | | || | | || | || || | | | || || || ||| ||| Sbjct 76409 ATAAGACTTTGTTACCATATGAGATTATTAACAAAGATAGCAAGCCTTACATACAAGT-- 76466 Query 474630 TACACGCA--GGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGC 474687 | | | ||||| | || ||||| | || ||| | |||| | ||||| || Sbjct 76467 TTCTGTTAAGGGTGAGAAGAAGCAATTAGCCCCAGAAGAGGTTTCCGCTATGGTCTTGCT 76526 Query 474688 CAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTA 474746 ||| |||||| ||| || ||| | ||||| || | ||||||| |||||||||||| Sbjct 76527 CAAGATGAAAGAAATTGCTGAGG-CTTATCTCGGTAAGGAAGTAAAGCATGCAGTAATTA 76585 Query 474747 CTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTG 474806 |||| ||||| || ||||||||| |||| ||||| || || || ||||| || |||| Sbjct 76586 CTGTCCCAGCTTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGTGCTATTG 76645 Query 474807 CAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTC 474866 | ||| | ||||| | |||||||||||||| ||||||||||| ||| |||||| |||| Sbjct 76646 CTGGTTTGAATGTAATCCGTATTATTAATGAGCCAACAGCAGCAGCAATTGCTTTTGGTT 76705 Query 474867 TTGATAAGAATTCTGACAA 474885 | |||||||| |||| || Sbjct 76706 TGGATAAGAAAGCTGAGAA 76724 Score = 140 bits (154), Expect = 2e-27 Identities = 260/380 (68%), Gaps = 9/380 (2%) Strand=Plus/Plus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852 || || |||||||| || || ||||| ||||| || ||||| | ||| ||| ||||| || Sbjct 77236 AACCCAGATGAAGCCGTCGCTTATGGTGCTGCCGTACAAGCTGGTATCTTAGCAGGTGAA 77295 Query 475853 TCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTT 475912 || || | | | || ||||| | |||| ||||| | | |||||| || Sbjct 77296 GGAGGT-AGTGATTTATTATTATTGGA--TGTT------ACTCCTTTAACTTTAGGTATT 77346 Query 475913 GAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAA 475972 || || ||||| || ||||||| || || |||| ||||| ||| | | ||| ||| Sbjct 77347 GAGACTGTTGGTGGAGTTATGACAAAGCTCATTGGTAGAAACACTGTTGTTCCAACCAAG 77406 Query 475973 AAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTT 476032 || |||| || ||||| |||||||| || ||||| ||||| | | | Sbjct 77407 AAGAGCCAAGTTTTCAGTACTTACCAAGATAATCAGCCAGCTGTACTTATCCAGGTTTAT 77466 Query 476033 GAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGT 476092 || ||||| | | | ||||| ||||| ||| || |||| || | ||| || Sbjct 77467 GAGGGTGAGCGTCCAATGACTAAGGATAACAACCTCCTCGGAAAATTCGAGCTTTCTGGA 77526 Query 476093 ATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAAT 476152 || || || ||||| ||||| ||||| |||||||| ||||||||||| |||||| | || Sbjct 77527 ATCCCACCAGCTCCAAGAGGTGTTCCCCAAATTGAGGTTACTTTTGAAATTGATACTGAT 77586 Query 476153 GGTATTCTTAATGTTACTGC 476172 |||||| | | |||| ||| Sbjct 77587 GGTATTTTACAAGTTAGTGC 77606 >seq14 Length=128642 Score = 152 bits (168), Expect = 3e-31 Identities = 276/398 (69%), Gaps = 18/398 (5%) Strand=Plus/Minus Query 475790 GTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT 475849 || || ||||| |||||||||||| ||||||||| | ||||| | | |||| ||| Sbjct 121102 GTTAACCCTGACGAAGCTGTTGCAATGGGAGCTGCTATACAAGCTGGTGTTTTGA-AGG- 121045 Query 475850 CAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGT 475909 |||||| | || || || | | | ||||| || || | || |||||| Sbjct 121044 ---------GAGAAA-TCAAGGATCTTTTGTTACTCGACGTTACACCCTTATCTTTAGGT 120995 Query 475910 CTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTAT-CCCATG 475968 ||||||| | || || || | ||| | ||| |||||||||| | || |||| Sbjct 120994 ATTGAAACTTTGGGTGGAGTTTTTACTCGATTAATTAACAGAAATACCACAATACCCACT 120935 Query 475969 CAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAAT 476028 |||| | | || ||||| |||||| | | || |||||||| || || || | Sbjct 120934 AAAAAGAGCCAA-GTATTCTCCACTGCTGCAGACAATCAAACTCAAGTTGGAATTAAAGT 120876 Query 476029 CTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTT--AATCTT 476086 || |||| |||||| |||| || |||||||| |||||| ||| ||| | Sbjct 120875 TTTCCAAGGAGAAAGAGAATTTGCTGCTGATAATAAGTTGCTTGGACAATTTGAAATGAT 120816 Query 476087 GAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGAT 476146 | || |||||||| || |||||||| ||||||||||||||||| || |||||||||||| Sbjct 120815 G--GGAATTCCTCCAGCACCCAGAGGGGTTCCTCAAATTGAAGTCACCTTTGATATTGAT 120758 Query 476147 GCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATC 476184 |||||||| ||| | |||||| ||| |||||| || Sbjct 120757 GCAAATGGAATTATGAATGTTGGTGCAATTGATAAGTC 120720 Score = 123 bits (136), Expect = 2e-22 Identities = 140/185 (76%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 474681 TTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGG-ACAAGAAGTAACTGATGCA 474739 |||| | ||||||||| |||| || | |||||||| | ||| |||| |||| Sbjct 121824 TTTTGGAAAAAATGAAAGAAACTGCCGAAACTTATCTTGGTAGAAGT-GTAAAGCATGCT 121766 Query 474740 GTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGA 474799 || |||||||| ||||| || |||||||||||||| |||||||||||||| ||||| || Sbjct 121765 GTTATTACTGTGCCAGCTTACTTTAATGATTCTCAGCGTCAAGCAACTAAGGATGCTGGC 121706 Query 474800 AGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCT 474859 || ||||| | ||||| | | || |||||||| ||||||||||| || ||||| Sbjct 121705 TCTATAGCAGGCTTAAATGTAACAAGAATCATTAATGAGCCAACAGCAGCAGCTCTTGCA 121646 Query 474860 TATGG 474864 || || Sbjct 121645 TACGG 121641 >seq84 Length=28885 Score = 150 bits (166), Expect = 1e-30 Identities = 133/166 (80%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 817098 TAGATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAA 817157 ||||||| ||||| ||||||||||| || ||||||||| | |||||||| |||||||||| Sbjct 16851 TAGATTTCTCATCACCAAATATTGCCAAAGAAATGCATGTGGGACACTTAAGATCTACAA 16910 Query 817158 TAATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACAAAGAATAA 817217 | |||||||| | | |||||| ||||| || |||| ||||||| |||| | | Sbjct 16911 TCATTGGTGATACAACATCTAGAATTCTTGAATATTTAGGATTTGAAGTATTAAGAGTTA 16970 Query 817218 ATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCATA 817263 ||||| |||| |||||||| || |||||||||||| | |||| ||| Sbjct 16971 ATCATGTTGGAGATTGGGGTACTCAATTTGGTATGCTTATTGAATA 17016 >seq74 Length=33375 Score = 141 bits (156), Expect = 6e-28 Identities = 340/506 (67%), Gaps = 19/506 (4%) Strand=Plus/Minus Query 355249 CCAGTGCCAATACCTTCTGTTCCATTAACTAAAATCATTGGAATTACAGGTACATAAAAT 355308 || || ||||| || || || ||||| || |||||||||||||||| || |||||| || Sbjct 2095 CCTGTACCAATTCCATCAGTACCATTTACCAAAATCATTGGAATTATTGGAACATAATAT 2036 Query 355309 ACTGGTTCAATCATTTTATTATCTTCAAATTGAT--GTTGCAATACATCAAAATCATGTT 355366 | |||||||| || ||| ||| || || ||| |||| | | |||| | Sbjct 2035 AAAGGTTCAATTTGTTGTCCATCATCATATAAATAAGTT--AATAAAGGATCATCAGCCT 1978 Query 355367 GTATGAAAATATATTTAGTTAATTGATTGAGTTGTGTGAAGATATATCG---TGCACTTG 355423 | |||||||||| |||| ||| | || | || || ||||| || ||||||| Sbjct 1977 CTGGGAAAATATATCTAGTCCATTTAGATAGCTTAGTAAATATATAACGAGCAGCACTTG 1918 Query 355424 CATTATCTTTGCCTCCACTTAATCTTGTACCAAATTGACCATTGGGAAGTAATAAATTTA 355483 | |||||| || || | ||| |||||||||||||| || ||| | ||||| Sbjct 1917 C---ATCTTTTCCACCTTCTTTTCTACTACCAAATTGACCACATGGTTCTAACAGATTTA 1861 Query 355484 TGTTGTTACTTCCAACATAATTTTGTGCCATTTTTATTATAGT-TTCAGTCATTGACTGT 355542 || |||||||||||| ||||||| ||||| || | ||||| | || | ||| | Sbjct 1860 GATTATTACTTCCAACAAAATTTTGAGCCATATTAACAATAGTACTTTGT-AATGATGAT 1802 Query 355543 TCTCCATGATGATATTTAGTTCTTTTCGAAACTGCACCTTGTAATTCAGATACTTTAATT 355602 |||||||||||||| | | || | ||| ||| ||||| | ||||||| Sbjct 1801 TCTCCATGATGATAAGCACTATGTTCAGCAACATAACCAGCTAATTGTGCAACTTTAA-- 1744 Query 355603 TCTTCTTTATAAATACCTTCTTCCTCTGAACCATACAATACTTTTCTTTGAGATGGTTTA 355662 ||| |||| || || || || || | | |||||||||||| ||||| Sbjct 1743 -GTTCATTATTAAGCTTTTTTTTAAATGTTGCAAAAAGTACTTTTCTTTGTCCAGGTTTT 1685 Query 355663 AGACCGTCAGCTATGTTAGGTATTGATCTCATATTATC--ATCGACTGAAAATGAAATAA 355720 | ||| || || || || || ||||| || |||| ||| ||| |||| | | || Sbjct 1684 AAACCATCTAATAAATTTGGAATAGATCTAGTAGTATCATATCTACT--AAATAATACAA 1627 Query 355721 GTTCGCGATGAATAAAATCATAATAT 355746 |||| ||||||||||||| ||||| Sbjct 1626 GTTCTTTATGAATAAAATCAAAATAT 1601 >seq19 Length=95265 Score = 132 bits (146), Expect = 3e-25 Identities = 280/404 (69%), Gaps = 24/404 (6%) Strand=Plus/Minus Query 269113 CTCGTTAACAATTGTGTCGG-TCCACGCGCTCTAGAGTGAGTTTTATCGCCCACCATTTG 269171 || |||| || ||||| | | ||| | ||||||| ||| |||||||| | ||||| || Sbjct 58655 CTGGTTAGCA-TTGTGACTGCTCCTCTAGCTCTAGCATGAATTTTATCGTCAACCATATG 58597 Query 269172 TTTTAAACGCTGATAATATGTCGGACCAATAAATATTTT-GACATGCATTTTTTCTCCCG 269230 ||||| | |||||| || || || |||||||| ||| | ||| | || | | | ||||| Sbjct 58596 TTTTAGTCTCTGATAGTAAGTTGGCCCAATAAAGATTCTCGAC-TCCAATCTCTTTCCCG 58538 Query 269231 TCATACCATTTGTCATTGTTTCATTTCCCCATGCTTC--ATATCCG----TATG-AAACT 269283 | ||||| |||| ||||||||| || ||| | | ||| |||| |||| Sbjct 58537 TATGGCCATTGTACATTACTTCATTTCC--ATTTTTCTGAAACCCGGAACTATGTAAACG 58480 Query 269284 AGTTCATCATTTATTTTATTAATATCTACACCTGTAAATGGTGTCGCATCACCATATACT 269343 | || || | || | | || | | ||||| || || ||||| || | | | Sbjct 58479 GCTAGAT-ATCTCTTCAACTGTAATTTTC----GTAAAAGGAGTTGCATCGCCCTCCAAT 58425 Query 269344 CCTTTAATAGCACATACTTTTCCTAATAGACATTCAATCAATTGTCCAATGGTCATACGT 269403 |||| ||| || || |||| || | |||||||||||| || || ||||| |||||||| Sbjct 58424 CCTTGAATTGCGCACGCTTTGCCAAGTAGACATTCAATTAAATGGCCAATTGTCATACGC 58365 Query 269404 TTTGGCATACAATTAGGATTAATAATAATATCTGGCACAAGTCCAGATTTAGTAAATGGC 269463 || ||| || |||||| |||||||| ||||| | || ||| || ||||||||| Sbjct 58364 GAAGGAATAGCATGAGGATTCATAATAATGTCTGGAATAATCCCATCTTGTGTAAATGGC 58305 Query 269464 ATATCTGCTC---TATGAATTTTAAATCCAACTGTACCTTTTTG 269504 ||||| ||| | || || ||| | || | |||||| ||||| Sbjct 58304 ATATC--CTCAGTTCTGTATGTTATA-CCGATTGTACCCTTTTG 58264 >seq4 Length=220233 Score = 122 bits (134), Expect = 6e-22 Identities = 133/177 (75%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 480593 ATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTG 480652 ||| || |||| ||||||||| |||||| | ||||||||||||||| || ||||| || Sbjct 205052 ATTGTAGTCAGATAGAGTTCTACCATCTTCCAATTGCTTTCCAGCAAAGATCAGACGCTG 205111 Query 480653 TTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 ||||||||||||||| || ||||| || || |||||| || ||| ||||||||||| Sbjct 205112 TTGATCAGGAGGAATGCCCTCCTTATCCTGGATCTTTGCCTTTACATTCTCAATAGTATC 205171 Query 480713 AGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || | ||| | || || || || || || | ||| || || |||||||| Sbjct 205172 GGAAGGTTCAACTTCCAATGTGATGGTCTTTCCTGTTAAAGTTTTGACAAAAATTTG 205228 >seq24 Length=91993 Score = 120 bits (132), Expect = 2e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 480572 AAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTT 480631 ||||| ||| | ||| || || ||||||| |||||||| ||| || | ||| || Sbjct 36365 AAGTGGACTCTTTTTG--AATGTTGTAATCAGAGAGAGTTCTACCATCCTCTAATTGTTT 36422 Query 480632 TCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTG 480691 ||| ||||| || | ||||||||||||||| || ||||||||||| || ||||||||| Sbjct 36423 TCCTGCAAAGATCAAACGTTGTTGATCAGGTGGGATTCCTTCCTTATCCTGAATCTTTGC 36482 Query 480692 TTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751 || ||| ||||| ||||| | || | ||| | || ||||| || || || | Sbjct 36483 CTTAACATTCTCAATTGTATCTGAAGGTTCAACTTCCAAAGTGATAGTCTTTCCTGTCAA 36542 Query 480752 AGTCTTAACGAAAATTTG 480769 ||||||||||||||| || Sbjct 36543 AGTCTTAACGAAAATCTG 36560 Score = 116 bits (128), Expect = 2e-20 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 480572 AAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTT 480631 ||||| ||| | ||| || || ||||||| |||||||| ||| || | ||| || Sbjct 36821 AAGTGGACTCTTTTTG--AATGTTGTAATCAGAGAGAGTTCTACCATCCTCTAATTGTTT 36878 Query 480632 TCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTG 480691 ||| ||||| || | ||||||||||||||| || ||||||||||| || ||||||||| Sbjct 36879 TCCTGCAAAGATCAAACGTTGTTGATCAGGTGGGATTCCTTCCTTATCCTGAATCTTTGC 36938 Query 480692 TTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751 || ||| ||||| ||||| | || | ||| | || ||||| || || || | Sbjct 36939 CTTAACATTCTCAATTGTATCTGAAGGTTCAACTTCCAAAGTGATAGTCTTTCCTGTCAA 36998 Query 480752 AGTCTTAACGAAAATTTG 480769 ||||||||| ||||| || Sbjct 36999 AGTCTTAACAAAAATCTG 37016 Score = 105 bits (116), Expect = 4e-17 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || || |||| |||||||| ||| || | ||| ||||| ||||| || | ||||||| Sbjct 36613 TTGTAGTCAGAGAGAGTTCTACCATCCTCTAATTGTTTTCCTGCAAAGATCAAACGTTGT 36672 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 |||||||| || ||||| ||||| |||||||||||| || ||| ||||| ||||| Sbjct 36673 TGATCAGGTGGGATTCCCTCCTTATCTTGAATCTTTGCCTTAACATTCTCAATTGTATCT 36732 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || | ||| | || ||||| || || || | |||||| || ||||| || Sbjct 36733 GAAGGTTCAACTTCCAAAGTGATAGTCTTTCCTGTCAAAGTCTTGACAAAAATCTG 36788 >seq7 Length=190084 Score = 105 bits (116), Expect = 4e-17 Identities = 327/501 (65%), Gaps = 24/501 (5%) Strand=Plus/Plus Query 894849 TTATAATGGTTTTGAACCAAGTGGTAGAATACATATTGCACAAGC---ATTAATAAC-AG 894904 |||| |||| |||||||| || ||||| |||||||| ||| ||||| || | Sbjct 132072 TTATGATGGATTTGAACCTTCAGGAAGAATGCATATTGCTCAATGTATATTAAAGACTAT 132131 Query 894905 TAATGAATACAAATGAAATTATTTCTTGTGGAGGAAGGATGATAATTTATATTGCTGATT 894964 ||||| | | || | || | | | ||||| | | || | || | || |||| Sbjct 132132 TAATGTAAATAAGTTAACTGAAT----GTGGATGCGTTTTTGTATTCTACGTAGCAGATT 132187 Query 894965 TATTTGCAAAAATGAATaaaaaaaTGGATTCTGATCTTGATAAAATAAAAGATGTAGGTT 895024 ||||| | | ||||| || |||| ||||||||| ||||| || ||| ||| Sbjct 132188 GGTTTGCTCTACTCAATAATAAGATGGGCGGTGATCTTGAAAAAATCAAGATTGTTGGTG 132247 Query 895025 TATATTTCATTGAAGTTTTTAAAGCATGTGGTATTAATATGTCTGAAACAAAGTTTATTT 895084 ||||||| || | | | || || || || ||||| | | || ||| ||| Sbjct 132248 AATATTTCGTTCACATATGGAAGGCTGCAGGAATGGATATGACAAATGTAAGATTTGTTT 132307 Query 895085 GGTCAAGTGATTTATTTAATA---AAAATCCTGAAAAATATTTTACAAGATTGTTAGATA 895141 || || |||||| ||||| || || || | | |||| |||| | || |||| Sbjct 132308 GGGCATCTGATTTTATTAATGGGGAAGATTCTAATGAGTATTGGTTAAGAGTTTTTGATA 132367 Query 895142 TTTCCGAAGAAACCTCTC--TTTCCAGGAGTAAAAGATGTTGTCAAATTATGGGTCGAAA 895199 |||| ||||| | || | || | |||||||||||| ||||||||||| || | Sbjct 132368 TTTCT--AGAAAGTTTAACATTACTAGAATTAAAAGATGTTGCCAAATTATGGGAAGACA 132425 Query 895200 AGACGGAGATGAATTATCTGTTTCTCAAATTATTTATCCTTGCATGCAAGTTGCAGATAT 895259 ||| |||||| | | | || | | ||||||| ||||||||| || ||||| Sbjct 132426 AGAAAATGATGAACAACCATGTGCTTCAGTATTTTATCCATGCATGCAATGCGCTGATAT 132485 Query 895260 TTTTGAACTCGAACCTGAAGGAATAGATATTTGTCAATTAGGTGTTGATCAACGTAAAGT 895319 || ||||| |||| ||||||||| || |||||| | |||||| | ||||| Sbjct 132486 ATTCCAACTC-------AAGG--CAGATATTTGCCAGTTAGGTATGGATCAAAGAAAAGT 132536 Query 895320 TAATATGCTCGCTCTCGAATA 895340 ||| ||||| ||| ||||| Sbjct 132537 TAACATGCTTGCTAGAGAATA 132557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268157495204888