Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001483505.1_202015-12- 30] 506 sequences; 8,861,795 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq74 89.7 6e-13 >seq74 Length=33375 Score = 89.7 bits (98), Expect = 6e-13 Identities = 144/202 (71%), Gaps = 10/202 (5%) Strand=Plus/Plus Query 165161 TTAAAGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAACATGGTGAA- 165219 |||||||||| |||||| ||| |||||||| ||||| | | |||| | ||||| ||| Sbjct 1744 TTAAAGTTGCACAATTAGCTGGTTATGTTGCTGAACATAGTGCTTATCATCATGGAGAAT 1803 Query 165220 CAAAATTT--ATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATA 165277 || ||| | || ||||| |||| | || ||| |||||||||| | |||||| Sbjct 1804 CATCATTACAAAGT---ACTATTGTTAATATGGCTCAAAATTTTGTTGGAAGTAATAATC 1860 Query 165278 TAGCATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTC-- 165335 || | | ||||| |||||||||||||| ||| |||||| || |||||| | Sbjct 1861 TAAATCTGTTAGAACCATGTGGTCAATTTGGTAGTAGAAAAGAAGGTGGAAAAGATGCAA 1920 Query 165336 -TGCGGCATCAAGATATATTTA 165356 ||| || || ||||||||| Sbjct 1921 GTGCTGC-TCGTTATATATTTA 1941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628527224540160