Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001483515.1_202015-12- 30] 53 sequences; 9,059,225 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq29 271 3e-67 seq53 181 4e-40 seq42 156 2e-32 seq28 150 7e-31 seq36 145 3e-29 seq10 116 1e-20 seq3 111 6e-19 seq24 109 2e-18 seq43 87.8 7e-12 seq15 87.8 7e-12 >seq29 Length=117188 Score = 271 bits (300), Expect = 3e-67 Identities = 496/715 (69%), Gaps = 16/715 (2%) Strand=Plus/Minus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 ||| ||||| |||||| | || ||||| | |||||||| ||||| | ||| | | Sbjct 99169 AGCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAACGATAC 99110 Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTAC 451032 |||||| ||| | |||| || ||||| || || || || |||| ||| ||||| Sbjct 99109 TGTAGATATTGTTCCAAACGATCAAGGTAACCGTACAACACCATCATATGTAGCATTTAC 99050 Query 451033 GGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAA 451090 || | || | ||| | || | || || || ||||| || | |||| | || Sbjct 99049 TGAAACTGAGCGTCTTATTGGTGATGCAGCAAAGAATCAA--GTTGCTAGAAATCCAGAA 98992 Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150 |||||||| | ||||||||||||| | ||||| | | || ||||||| | | |||||| Sbjct 98991 AACACAGTTTTTGATGCTAAACGTCTTATTGGTAGAAAGTTTGATGATCAGGCAGTACAA 98932 Query 451151 AAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAA---TCAAAAAGGAAAGCCCTATATT 451207 | || | | || | | | | ||||| | || ||| | ||||| || | Sbjct 98931 AGTGATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGATAAGCCA-ATCAT 98873 Query 451208 CAA-GTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGT 451266 || ||||| || |||||||| || || | ||||||||||||| ||||||| Sbjct 98872 CAGTGTAAACTACTTAGGTGAAAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGT 98813 Query 451267 TCTTACTAAA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAG-TTACTGATGCA 451324 | |||| ||| ||||| |||| | ||| ||| |||| || ||| ||| |||| Sbjct 98812 T-TTACAAAAGATGAAGGAAATCTCTGAAGCATAC-TTGGGTCGCCAAATTAAGAATGCT 98755 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 ||| |||||||||| |||||||||||||| ||||||| |||||||| || |||||||| Sbjct 98754 GTAGTTACTGTTCCAGCTTATTTCAATGACTCACAACGTCAAGCAACAAAGGATGCAGGT 98695 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 ||||||||||| ||||| | |||| ||||| || || || ||||||||| | || Sbjct 98694 GCAATTGCTGGTTTGAATGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTGCT 98635 Query 451445 TATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGT 451504 ||||| || | || |||| ||| | || | |||| | || | || ||||| ||| Sbjct 98634 TATGGTCTTGATAA---GAAAGGAACTGGCGAGAGAAATGTATTGATCTTCGATTTAGGT 98578 Query 451505 GGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCA 451564 || || ||| |||| || || | | ||||||||||| | |||||||| || || Sbjct 98577 GGTGGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTTAAAGCT 98518 Query 451565 ACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGAAT 451619 ||| |||||||||||| | || ||||||||| ||||||| | | ||||||| Sbjct 98517 ACCGCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAACAGACTCGTGGAAT 98463 >seq53 Length=208220 Score = 181 bits (200), Expect = 4e-40 Identities = 458/690 (66%), Gaps = 15/690 (2%) Strand=Plus/Plus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 ||||| || ||| | || || || | ||||||||| ||| | ||| | ||||| | ||| Sbjct 80413 ATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAGAGTA 80472 Query 450977 GAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGAT 451036 || ||||| ||||||| ||||| || | ||| || |||| ||| || || ||| Sbjct 80473 GAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCACTGAT 80532 Query 451037 TCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAAAACA 451094 || ||| | | || || | || || ||||| | || |||| | | | | Sbjct 80533 GATGAGAGATTGATTGGTGAATCAGCCAAGAATCAA-GCTACTATCAA-TCCAGTTCAGA 80590 Query 451095 CAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAG 451154 | | | || | || | | ||||| ||| | | | |||||| |||| ||||| | Sbjct 80591 CTTTGTTCGACGTAAAGAGACTTATTGGTCGTCGTTTTAAGGATGATTCTGTCCAAAAGG 80650 Query 451155 AGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTAA 451214 | || | || || | ||||| | | || || | | ||||| || || ||||| Sbjct 80651 ATAAGACTTTGTTACCATATGAGATTATTAACAAAGATAGCAAGCCTTACATACAAGTTT 80710 Query 451215 ATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTA 451274 | ||| ||||| | || || || || ||||| |||| ||||||| ||| || Sbjct 80711 CTGTTAAGGGTGAGAAGAAGCAATTAGCCCCAGAAGAGGTTTCCGCTATGGT-CTTGCTC 80769 Query 451275 AA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 || |||||||||| || || ||| | ||| ||| | |||||||||||||| Sbjct 80770 AAGATGAAAGAAATTGCTGAGGCTTATCTCGGTAAGGAAGTAAAGCATGCAGTAATTACT 80829 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || || ||||| || |||||||| || || || || || || ||||| || ||||||| Sbjct 80830 GTCCCAGCTTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGTGCTATTGCT 80889 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTA 451453 ||||| ||||| | || ||||||||||| || |||||||| || | || | ||| | Sbjct 80890 GGTTTGAATGTAATCCGTATTATTAATGAGCCAACAGCAGCAGCAATTGCTTTTGGTTTG 80949 Query 451454 GGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACT 451513 | | ||||| || || || | |||||||||| ||||| ||||| || ||| Sbjct 80950 G-------ATAAGAA--AGCTGAGAAGAGCATTTTAGTATACGATTTGGGTGGTGGTACT 81000 Query 451514 CATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGT 451573 |||| |||| | | | ||||| | || || || || || || || | |||| Sbjct 81001 TTTGATGTTTCTCTCTTGACCATTGATAACGGCGTTTTCGAGGTCGTTGCTACAAGTGGT 81060 Query 451574 GATACTCATCTAGGAGGTGAAGATATTGAT 451603 ||||| ||| | |||||||| ||| | ||| Sbjct 81061 GATACCCATTTGGGAGGTGAGGATTTCGAT 81090 Score = 116 bits (128), Expect = 1e-20 Identities = 350/536 (65%), Gaps = 27/536 (5%) Strand=Plus/Plus Query 451895 GATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTT---- 451950 ||||| || || | ||||| |||||||| || || ||||| ||||||| || | Sbjct 81382 GATGAGATCGTTTTGGTAGGTGGTTCTACTCGTATCCCTAAGATTCAAGCCTTGATCAAG 81441 Query 451951 GTCTTCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAAT---CCTGATGAAGCTGT 452007 | ||||| || ||||| | | | || || | || | || |||||||| || Sbjct 81442 GAGTTCTT----TGATGGAAAGGAGCCA---AACAGAGGAATTAACCCAGATGAAGCCGT 81494 Query 452008 TGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGATGAAAAATTAGG 452067 || ||||||||||| || ||||| | ||| || ||||| || || | | | Sbjct 81495 CGCTTATGGTGCTGCCGTACAAGCTGGTATCTTAGCAGGTGAAG--GAGGTA-------G 81545 Query 452068 AGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAAT 452127 ||| | | ||| | ||||| || ||| || || | || |||| || | ||||||| | Sbjct 81546 TGATTTATTATTATTGGATGTTACTCCTTTAACTTTAGGTATTGAGACTGTTGGTGGAGT 81605 Query 452128 GATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAG 452187 ||||| || | ||| || ||| | |||| || ||||| ||| || || Sbjct 81606 TATGACAAAGCTCATTGGTAGAAACACTGTTGTTCCAACCAAGAAGAGCCAAGTTTTCAG 81665 Query 452188 TAC--AGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCA 452245 ||| | ||| ||||| || |||| |||| ||| || || | ||| || || ||| || Sbjct 81666 TACTTACCAA--GATAATCAGCCAGCTGTACTTATCCAGGTTTATGAGGGTGAGCGTCCA 81723 Query 452246 ATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCA 452305 ||||| ||||| || || ||| |||| ||||| || || || ||| Sbjct 81724 ATGACTAAGGATAACAACCTCCTCGGAAAATTCGAGCTTTCTGGAATCCCACCAGCTCCA 81783 Query 452306 AGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTG 452365 || || ||| |||||||| |||| | ||| ||||| | |||||||| | | || Sbjct 81784 AGAGGTGTTCCCCAAATTGAGGTTACTTTTGAAATTGATACTGATGGTATTTTACAAGTT 81843 Query 452366 AGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAA 452421 |||||| || || |||| ||||| || || ||||| || || |||||||| Sbjct 81844 AGTGCAAAGGATAAGGGTACTGGTAAATCCGAGAAGATTACTATCACAAATGATAA 81899 >seq42 Length=592675 Score = 156 bits (172), Expect = 2e-32 Identities = 169/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||||||||| || |||| || || ||||| ||| | || |||||| | || Sbjct 88764 ATGCAGATTTTCGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTCA 88823 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | |||| ||| ||||| |||||||||||||| || ||||||||| Sbjct 88824 GATACAATTGAGAATGTTAAGGCAAAGATTCAGGATAAGGAAGGAATCCCACCTGATCAA 88883 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || |||| |||||| | || ||||| |||||| | | ||||| || Sbjct 88884 CAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAAC 88943 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || | |||||||| || ||||| ||||| Sbjct 88944 ATTCAAAAAGAGTCCACTTTACACTTAGTCTTGAGACTTAGAGG 88987 Score = 152 bits (168), Expect = 2e-31 Identities = 168/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| ||||| || |||| || || ||||| ||| | || |||||| | || Sbjct 88308 ATGCAGATTTTTGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTCA 88367 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | |||| ||| ||||| |||||||||||||| || ||||||||| Sbjct 88368 GATACAATTGAGAATGTTAAGGCAAAGATTCAGGATAAGGAAGGAATCCCACCTGATCAA 88427 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || |||| |||||| | || ||||| |||||| | | ||||| || Sbjct 88428 CAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAAC 88487 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || | |||||||| || ||||| ||||| Sbjct 88488 ATTCAAAAAGAGTCCACTTTACACTTAGTCTTGAGACTTAGAGG 88531 Score = 138 bits (152), Expect = 4e-27 Identities = 165/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || || || |||| || || ||||| ||| | || |||||| | || Sbjct 88536 ATGCAGATTTTTGTCAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTCA 88595 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | |||| ||| |||||||||||||| ||||| || ||||||||| Sbjct 88596 GATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAGGGAATCCCACCTGATCAA 88655 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || |||| |||||| | || ||||| |||||| | | || || || Sbjct 88656 CAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGACTACAAC 88715 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || | || |||||||| || || ||||| Sbjct 88716 ATTCAAAAAGAGTCTACTTTACATTTAGTATTGAGGCTCAGAGG 88759 >seq28 Length=318753 Score = 150 bits (166), Expect = 7e-31 Identities = 231/329 (70%), Gaps = 9/329 (3%) Strand=Plus/Minus Query 451274 AAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 |||||||||||||| || ||| ||| ||||| || | |||| || |||||| Sbjct 272099 AAAATGAAAGAAACTGCCGAAACTTATCTTGGTAGAAGTGTAAAGCATGCTGTTATTACT 272040 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || || ||||| || |||||| | || || ||||||||||| ||||| || ||| || Sbjct 272039 GTGCCAGCTTACTTTAATGATTCTCAGCGTCAAGCAACTAAGGATGCTGGCTCTATAGCA 271980 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTA 451453 || |||||||| |||| |||||||| || |||||||| ||||| ||||| ||| | Sbjct 271979 GGCTTAAATGTAACAAGAATCATTAATGAGCCAACAGCAGCAGCTCTTGCATACGGAAT- 271921 Query 451454 GGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACT 451513 ||||| || |||| | |||| || ||| | |||||| || ||||| ||| Sbjct 271920 GGAAA--------AAGCAGATGGCAAAACAATCGCAGTTTATGATTTGGGAGGAGGTACT 271869 Query 451514 CATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGT 451573 |||| |||| | | ||| | || || |||||||| || ||||| |||||| Sbjct 271868 TTCGATATTTCTATTTTAGAGATTCTTGGCGGAGTGTTTGAAGTTAAAGCAACTAATGGT 271809 Query 451574 GATACTCATCTAGGAGGTGAAGATATTGA 451602 | ||| |||||||| ||||| |||| Sbjct 271808 AACACTTCCCTAGGAGGAGAAGACTTTGA 271780 Score = 95.1 bits (104), Expect = 5e-14 Identities = 269/409 (66%), Gaps = 22/409 (5%) Strand=Plus/Minus Query 451988 GTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGT 452047 || || ||||| |||||||||||| || ||||| | ||||| | | || | | ||| Sbjct 271385 GTTAACCCTGACGAAGCTGTTGCAATGGGAGCTGCTATACAAGCTGGTGTTTTGA-AGG- 271328 Query 452048 TCAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGA 452107 || |||| | | ||| || ||||| | || || ||||| ||||| | || Sbjct 271327 ---------GAGAAATCAAG-GATCTTTTGTTACTCGACGTTACACCCTTATCTTTAGGT 271278 Query 452108 GTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGT 452167 ||||||| |||||| | | ||| |||||||| || || | || || | Sbjct 271277 ATTGAAACTTTGGGTGGAGTTTTTACTCGATTAATTAACAGAAATACCACAATACCCACT 271218 Query 452168 AAAAAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACC---AGGTGTAACTATTCAA 452224 |||||||| ||| ||| || || || || ||| | || || || || || Sbjct 271217 AAAAAGAGCCAAGTATTCTCCACTGCTGCAGACAATCAAACTCAAGTTGGAATTA---AA 271161 Query 452225 GTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTT--ACTC 452282 || || |||||||| | | | | | |||||||| || ||| ||||| | | Sbjct 271160 GTTTTCCAAGGAGAAAGAGAATTTGCTGCTGATAATAAGTTGCTTGGACAATTTGAAATG 271101 Query 452283 TTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTG 452342 | || ||||||| || || || ||||||||||||| | |||| |||| ||| Sbjct 271100 ATGGGAA--TTCCTCCAGCACCCAGAGGGGTTCCTCAAATTGAAGTCACCTTTGATATTG 271043 Query 452343 ATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAA 452391 |||||||||| ||| | ||||| ||||| |||| || ||| ||||||| Sbjct 271042 ATGCAAATGGAATTATGAATGTTGGTGCAATTGATAAGTCAACTGGAAA 270994 >seq36 Length=268453 Score = 145 bits (160), Expect = 3e-29 Identities = 300/443 (68%), Gaps = 9/443 (2%) Strand=Plus/Minus Query 364565 TATTCCATCTTTAGTTGATGGATTTAAACCTTCTCAAAGAAAAATTTTTTATGGAGCAAA 364624 ||||||| |||| | ||||| || |||||| ||||||||| | ||| || | || Sbjct 54999 TATTCCAAATTTATTAGATGGTTTAAAACCTGGACAAAGAAAAGTACTTTTTGCAACA-- 54942 Query 364625 TTTAAGAGGATTAGAAAAAGATCAAGTAAAAGTAGCTCAATTAGCAGGTTTTGTATCTGA 364684 ||||| | | || | || || | ||||| || |||||||| |||| ||| |||| Sbjct 54941 TTTAAAAAAAAGCTTAATA-ATGAACTTAAAGTTGCACAATTAGCTGGTTATGTTGCTGA 54883 Query 364685 CCGGGTAGCTTATCATCACGGTGAGGCAAGTTTAATGGGAGCAATAATTGGAATGGCACA 364744 | ||||||||||| || || || ||| | | || || ||||| || Sbjct 54882 ACATAGTGCTTATCATCATGGAGAATCATCATTACAAAGTACTATTGTTAATATGGCTCA 54823 Query 364745 AAATTTTGTTGGAAGTAATAATGTAAATTTACTAGAACCAAAAGGACAATTTGGAAGTCG 364804 |||||||||||||||||||||| ||||| | |||||||| || |||||||| ||| | Sbjct 54822 AAATTTTGTTGGAAGTAATAATCTAAATCTGTTAGAACCATGTGGTCAATTTGGTAGTAG 54763 Query 364805 AGTAATGGGAGGTAAAGATTC---TGCCAGCCCACGTTATATTTGGACCAAACTTGAAAA 364861 | | || || |||||| | ||| | |||||||| | || || || || Sbjct 54762 AAAAGAAGGTGGAAAAGATGCAAGTGC---TGCTCGTTATATATTTACTAAGCTATCTAA 54706 Query 364862 AGTGGCAGGATTAATATTTAGAAAAGAAGATAATCCAATTTTAAATTATATTAATGATGA 364921 | | | ||| || || | | | ||| |||| | |||| |||| | ||||||| Sbjct 54705 ATGGACTAGATATATTTTCCCAGAGGCTGATGATCCTTTATTAACTTATTTATATGATGA 54646 Query 364922 TGGATTAATGGTTGAACCTGAATTTTATCTTCCTATTATTCCTATGATTTTAGTAAATGG 364981 |||| | |||||||| || |||| |||| || ||||| |||||||| |||||||| Sbjct 54645 TGGACAACAAATTGAACCTTTATATTATGTTCCAATAATTCCAATGATTTTGGTAAATGG 54586 Query 364982 AGCAACAGGCATTGGTACTGGTT 365004 | || |||||||| |||| Sbjct 54585 TACTGATGGAATTGGTACAGGTT 54563 Score = 138 bits (152), Expect = 4e-27 Identities = 401/596 (67%), Gaps = 40/596 (7%) Strand=Plus/Minus Query 363744 GGAATTCCTAAACTAGAAGATGCTAATAAAGCAGGAACAAAAGATGCTCATAAATGTGGA 363803 ||||| || ||||| |||||||| || |||| || | || | | |||||| Sbjct 55808 GGAATCCCAAAACTTGAAGATGCAAACGAAGCTGGTGGACCCCATTCCAAAAAATGTACT 55749 Query 363804 -TTATATTTAGCAGAGGGAGATTCTGCTCT---TTCTATGATTCTGTCAGGGTTATCAAG 363859 ||||| ||| | || || ||||||||| |||| || ||| |||| ||||| | Sbjct 55748 CTTATACTTA-CTGAAGGTGATTCTGCTAAAACTTCT-TG--TCTTGCAGGATTATCTAT 55693 Query 363860 TAAAGATAGAAATTTTTATGGTGCCTTTCCGTTAAAAGGAAAATTATTAAATGTAAGAGA 363919 | | |||| | | || ||| | ||||| || || ||| | |||||||| ||||| Sbjct 55692 TGTTGGTAGAGACTATTTTGGAGTATTTCCACTACGTGGTAAACTTTTAAATGTTAGAGA 55633 Query 363920 AGCATCAGTTAAACAAATTATGGGAAATGATGAGATATCAAACCTTaaaaaaaTTTTAGG 363979 ||| ||| |||||||| || || |||| ||| ||| ||| || ||||| || || Sbjct 55632 AGCTTCATTTAAACAACAAATTGGTAATGTTGAAATACAAAATATTCTTAAAATATTGGG 55573 Query 363980 ATTACGTAATGAATTTAAATATGAAATGGATGAAGAATTTAATACTTTAAGATATGGAAA 364039 |||| ||| || | |||||||| | ||| | | | ||| ||||||||||| Sbjct 55572 ATTAGGTATTGGACAAAAATATGATA---ATGGACCAGTCAAT---TTAAGATATGGTTC 55519 Query 364040 AGTAATAATTTTATGTGATTCAGATGTAGATGGAAGTCATATTAAGGGACTAATTTTAAA 364099 |||| | | |||| |||| ||||| ||||||||||| ||||| ||| | || Sbjct 55518 TTTAATGCTAATGACTGATCAAGATCATGATGGTAGTCATATTAAAGGACTCATTATTAA 55459 Query 364100 TATGTTTCA-TAGTATGTGGCCTAATCT-TTTAAAAAGAGAAGGTT-TTATTACAACTAT 364156 | | | || || ||| ||||| | | | || | ||| | || ||| |||| | | Sbjct 55458 TTTAATACATTATTAT-TGGCCAAGTTTAATTCATTTTAGAGGATTCTTAAAACAA-TTT 55401 Query 364157 GAACACTCCAATTGTTAAAGCAACAAAAGGA---AAAGAAATATTAAAATTTTATAATTT 364213 | | ||||| ||||||||||| | ||||||| || ||||| | ||| | || ||| Sbjct 55400 GTA-ACTCCTATTGTTAAAGCTAAAAAAGGATCTAATGAAATTT---CATTCTTTACTTT 55345 Query 364214 AACTGATTATGATAATTGGAGAAATGATAAT------AATACAAAAGGATATTATATT-A 364266 | ||| ||||| | |||||||| ||||| || ||| |||| | ||| | Sbjct 55344 ATATGAATATGAACAATGGAGAAAGAATAATTCATCAAACTTAAATGGAT-GGAGATTCA 55286 Query 364267 AATATTACAAAGGATTAGGAACATCT---GATTCTAAAGAAGCTAAAGAATAtttt 364319 | ||||| ||||| ||||| |||||| || ||| ||| ||||||||||||| Sbjct 55285 AGTATTATAAAGGTTTAGGTACATCTACAGA-TCT--TGAATTTAAAGAATATTTT 55233 Score = 104 bits (114), Expect = 9e-17 Identities = 135/186 (73%), Gaps = 3/186 (2%) Strand=Plus/Plus Query 96115 TACTTTACTAATGTTTAATGCTGGGCTCCAGTTATTTTTTAAAATATCTAAACAAATTGC 96174 |||| | |||| |||| || || |||||| || |||||||||||| || ||||| || Sbjct 210816 TACTGTTCTAAGAGTTAAAGCAGGACTCCAGGCATCTTTTAAAATATCCAAGCAAATAGC 210875 Query 96175 ACCTGT---AGTACTAATATTTGGATGATAAATAGGAGTTTTAAATATAATTTTAGGAGG 96231 ||||| | || |||||| ||||| |||| || | ||| ||| ||| ||||| Sbjct 210876 TCCTGTTTGACTAGAAATATTCGGATGCCAAATTCTTGTGATGAATTTAACTTTTGGAGG 210935 Query 96232 CTTATATGGATAGTCTTCAGGAAAAGTAATTTCTAATTGGAATACTCCACCCTCATAGGG 96291 || |||||||| |||| || | | |||| || | ||| |||| || || ||||| || Sbjct 210936 CTCGTATGGATATTCTTTTGGTACAATAATATCAAGTTGAAATATACCTCCTTCATATGG 210995 Query 96292 TGTTCC 96297 |||||| Sbjct 210996 TGTTCC 211001 >seq10 Length=470636 Score = 116 bits (128), Expect = 1e-20 Identities = 160/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || ||||| | || || || || || || | || |||||| | || Sbjct 335975 ATGCAAATTTTTGTCAAAACTTTAACAGGAAAGACCATCACATTGGAAGTTGAACCTTCC 335916 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | | || ||| || || |||||||| || ||||||||||||||| Sbjct 335915 GATACTATTGAGAATGTAAAGGCAAAGATCCAGGATAAGGAGGGCATTCCTCCTGATCAA 335856 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || || ||| | |||||||| |||||| | | || || ||| Sbjct 335855 CAGCGTCTGATCTTTGCTGGAAAGCAATTGGAAGATGGTAGAACTCTATCTGACTACAAT 335796 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || | || |||||||| ||||| ||||| Sbjct 335795 ATCCAGAAGGAGTCCACTTTGCATTTAGTATTGAGACTTAGAGG 335752 >seq3 Length=360176 Score = 111 bits (122), Expect = 6e-19 Identities = 129/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 248791 ATTTTCATTGGTCCTATGTTTTATTTGAGACTTAAACATATGGTACTTGATAAAGTTCAT 248850 ||||| |||| ||||| | ||| | | | ||||||||||| ||||||||| | ||| Sbjct 44796 ATTTTTGTTGGGCCTATTTATTACCAAAAATTGAAACATATGGTTCTTGATAAAATGCAT 44855 Query 248851 TCCAGAAGTATGGGTCCTAGACAAGCTATTACTAGACAACCCATGGAAGGACGTTCTAAA 248910 | ||| | | ||||||||||||| | |||| |||||||||| |||||| | ||||| Sbjct 44856 GCAAGAGGAAGGGGTCCTAGACAAATTCTTACCAGACAACCCACTGAAGGAAGATCTAAG 44915 Query 248911 GATGGAGGTCTTAAAATTGGAGAGATGGAAAAAGATGCAATGGTTGCTCATGGA 248964 |||||||| || |||| || ||||||| |||| | || ||| ||||| Sbjct 44916 GATGGAGGACTACGTCTTGGTGAAATGGAAAGAGATTGTTTAGTAGCTTATGGA 44969 >seq24 Length=225370 Score = 109 bits (120), Expect = 2e-18 Identities = 129/172 (75%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 412289 TTCCAAAACGACCACTTCTACCAATTCTATGTATAAAAGTTTCATGATTTTTAGGTAAAT 412348 ||||||| | |||||||| ||||||| ||| ||| | ||| | ||| |||||| || Sbjct 210164 TTCCAAATCTGCCACTTCTTCCAATTCGATGAATATATAATTCTTTATTAATAGGTAGAT 210105 Query 412349 CATAATTTATAACTAATTTAACCTCAGGAATATCTATCCCCCGTGCTAATAAATCAGTTG 412408 | || |||| |||||| || || | | | ||| || || | | | ||||||| |||| Sbjct 210104 CGTAGTTTACAACTAAATTGACTTGTTGTACATCAATACCTCTTCCCCATAAATCTGTTG 210045 Query 412409 TTAATAAAATTCGTGTTTTTCCCTCTCTAAATTCATCTACAATTTTACTTCT 412460 | | ||||| |||||||||||| |||||||| || ||| |||| || ||||| Sbjct 210044 TAATTAAAACTCGTGTTTTTCCTTCTCTAAACTC-TCT-CAATATTTCTTCT 209995 >seq43 Length=79716 Score = 87.8 bits (96), Expect = 7e-12 Identities = 168/244 (69%), Gaps = 14/244 (6%) Strand=Plus/Minus Query 420706 CCAAATGTATCAATTCCTCTTCTTCCAGCTCGTCCTGCCATTTGAAGAAATTCATCAGTT 420765 ||||| |||||||| |||||||||||||||| ||||| |||||| | ||||| | Sbjct 76861 CCAAAAGTATCAATACCTCTTCTTCCAGCTCTTCCTGACATTTGTGTATATTCAGAA--- 76805 Query 420766 CGTAAGAA-TCTTCTA------CCACAATCATCATATTTAGATAATCCAGTAAATACAAC 420818 | ||||| | ||||| | | ||||| | |||| ||| | ||||||||||| Sbjct 76804 -GAAAGAAGTATTCTATTTTTTCTTCCATCATACTTTTTA-ATA--CTAGTAAATACAAT 76749 Query 420819 AGTTTTTGTAGGCATATTTACACCAACAGAAAAAGTTTCAGTTGCTAACAAAACTTTAAT 420878 || | | | || ||| | || | ||| | || |||||||| || || ||||| || Sbjct 76748 AGATCTAGCTGGACAATTAATTCCCATAGATATTGTCTCAGTTGCAAATAATACTTTGAT 76689 Query 420879 TAAtttttttGAATAAAGAATTTCAACAATTTCTTTTAAAATAGGAATTATACCAGAATG 420938 |||| | | | | | | || ||| |||||||| | ||| |||| || ||| ||| Sbjct 76688 TAATCCTCTAGTAAATAAGATCTCAGTCATTTCTTTGATAATTGGAAGCATTCCACTATG 76629 Query 420939 ATGA 420942 |||| Sbjct 76628 ATGA 76625 >seq15 Length=959544 Score = 87.8 bits (96), Expect = 7e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 420714 ATCAATTCCTCTTCTTCCAGCTCGTCCTGCCATTTGAAGAAATTCATCAGTTCGTAAGAA 420773 ||||| ||||||||||| |||| || |||||||| || || ||| ||| || Sbjct 285550 ATCAAGGCCTCTTCTTCCTGCTCTACCACTCATTTGAATGAACTCTCCAG-AGTTAACAA 285608 Query 420774 TCTTCTACCACAAT-CATCATATTTAGATAATCCAGTAAATACAACAGTTTTTGTAGGCA 420832 | | ||| | | ||||| |||| | | |||||| | ||| ||||||| ||||| Sbjct 285609 TTCTGTACTCCTTTCCATCAAATTTTCTAAGTGAAGTAAAGATAACCGTTTTTGCAGGCA 285668 Query 420833 TATTTACACCAACAGAAAAAGTTTCAGTTGCTAACAAAACTTTAATTAAtttttttGAAT 420892 | || | || | ||||||||| || || | || | |||||||| ||| | | | Sbjct 285669 TGTTAATTCCCATAGAAAAAGTCTCTGTAGAGAATAGTACTTTAATAAATGACTCTCCAA 285728 Query 420893 AAAGAATTTCAACAATTTCTTTTAAAATAGGAATTATACCAGAATGATGA 420942 |||||| ||||| ||||| |||| || ||||| || ||| ||||||| Sbjct 285729 AAAGAAGCTCAACTATTTCCTTTACAACAGGAAGTAAACCTCCATGATGA 285778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975717058363724