Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001483515.1_202015-12- 30] 53 sequences; 9,059,225 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq29 423 2e-113 seq27 219 5e-52 seq53 167 3e-36 seq36 159 4e-34 seq28 104 3e-17 seq39 96.9 4e-15 >seq29 Length=117188 Score = 423 bits (468), Expect = 2e-113 Identities = 1067/1603 (67%), Gaps = 38/1603 (2%) Strand=Plus/Plus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||| ||| | || || || || ||||| | ||||| |||||| || || || ||| Sbjct 97589 TCATCCTCACCCTTGTATTTCTCAGCATCATTAACCATACGTTCAATATCGTCCTTTGAT 97648 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 ||||| |||||||| || ||||| || ||||| | ||||| | | ||||| || Sbjct 97649 AATCTACCCTTATCGTTAGTAATAGTGATCTTGCTGCTCTTACCAGTGCTTTTATCAACA 97708 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 ||| ||||||||| |||||||| ||||||| ||| || | || | |||||||||| | Sbjct 97709 GCAGATACATTCAAGATACCATTAGCATCAATATCAAAAGTGACTTCAATTTGTGGTACA 97768 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || || ||||| | ||||||||| | || || | ||||| | | ||||||| | Sbjct 97769 CCTCTTGGTGCTGGTGGAATACCATCAAGATGGAACTTTCCAAGGAGATGGTTATCCTTA 97828 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATT--GTCACCGCAGGTTGATTATCTTGTG 6866 | | | | ||||| ||||| |||| || | |||||| || ||||| Sbjct 97829 GTCATGGCTCTCTCACCCTCATAAACTTGGATCAAGACACCGCTC--TGGTTATCAGCAT 97886 Query 6867 CCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGG 6926 || | ||||| |||| ||||| | ||| || || ||||| | ||||| | || Sbjct 97887 AAGTAGTGAAGACTTGTGTCTTCTTTGCTGGGATAGTTGTATTACGTTCAATAAGCTTGG 97946 Query 6927 TCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACA 6986 |||||| |||||| |||||| | || || || | || | || ||||| | ||| | Sbjct 97947 TCATAACACCACCAGCAGTTTCTAAACCGAGTGATAATGGAGCAACATCCAATAATAAGA 98006 Query 6987 GGTCTTGAACAG-ATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045 | || || || | | | | || |||| ||||||| || ||||| || | || || Sbjct 98007 GATCCTGTACGGCAGAGGATTGCT-CACCATTTAAGATAGCAGCTTGTACAGCAGCACCA 98065 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 || || || || ||||| || || || | ||| | |||||||||||||| | ||| Sbjct 98066 TAAGCAACAGCTTCATCTGGATTGATTGCTTTGCATGGCTCTTTACCGTTAAAGAATTCC 98125 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 | || |||| || || || ||||| || ||||| ||||| || | |||| Sbjct 98126 TGAATCAAGGCCTGAACCTTTGGAATACGTGTAGAACCACCAACCAATACAACATCATGT 98185 Query 7166 ACTTTCGAT---TTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACAT 7222 || ||| || || || | || ||| ||| || || || | | | | Sbjct 98186 ACA---GATCTCTTGTCCATACCAGCATCCTTGAGTACTTTCTCAACTGGAGCTAAAGTT 98242 Query 7223 TTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGA---TGTATAG 7279 |||||| | || || ||||| || || | || | | |||| || ||| Sbjct 98243 GCACGGAAGTAATCAGCGCAGAGTTCTTCGAATCTGGCTCTACTGATGGCAACTGAATA- 98301 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 ||||| || || || | ||||| | ||||| || | ||| | | || || || Sbjct 98302 --ATCAATACCCTCATAGAGTGAATCTAACTCAATTGTAGCTTGAGTAGAAGATGACAAA 98359 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 |||| |||||| |||||||| |||| | | | | || | | || | Sbjct 98360 GTTCTCTTTGCACGCTCACATTGAGTTCTGAGTCTTCTTAAAGCTCTAGCATTTGAAGTT 98419 Query 7400 ATATCTTT--CT-TATGTTTACGTTTAAACTCTT---CAGAGAAGTGTCGAAGGAGTCTC 7453 | ||| | || ||| || | || || |||| || |||| | | |||||| Sbjct 98420 AAATCCATACCTCTATTCTTTCTCTTGAAATCTTGTACACAGAATTCC---ACGAGTCTG 98476 Query 7454 GAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATA 7513 ||| |||||||||||||||||||| ||||| || ||||| ||||| |||||||| ||| Sbjct 98477 TTATCAAAATCTTCACCACCCAAGTGAGTATCACCAGCGGTAGCTTTAACTTCAAAAATA 98536 Query 7514 CCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGT 7573 || ||||||| |||| || || |||||||| ||||||||||| | || || || | | Sbjct 98537 CCATCTTCAATAGTTAATAATGATACATCAAAAGTACCACCACCTAAATCGAAGATCAAT 98596 Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 || || | ||| | | |||||||| ||||| || || ||||| || || ||||| Sbjct 98597 ACATTTCTCTCGCCAGTTCCTTTCTTATCAAGACCATAAGCAATAGCAGCTGCAGTTGGC 98656 Query 7634 TCATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTG 7692 || ||||| || | | ||| |||| |||||||| | | ||||| || || ||||| Sbjct 98657 TCGTTAATGATTCTCATTACA-TTCAAACCAGCAATTGCACCTGCATCCTTTGTTGCTTG 98715 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 ||||| || || || || || || || || || || || || | | | | || ||| Sbjct 98716 ACGTTGTGAGTCATTGAAATAAGCTGGAACAGTAACTACAGCATTCTTAATTTGGCGACC 98775 Query 7753 GAGATACGATTCCGCGATATCTTTCAT-TTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 | || | ||| | ||| || ||||| ||| |||| |||||| | ||||| ||||||| Sbjct 98776 CAAGTATGCTTCAGAGATTTCCTTCATCTTTTGTAA-AACCATAGCAGAAATTTCTTCAG 98834 Query 7812 CCGCAAACTGTTTCGTTTCACCGTTAA--AATCAACTTCAATCATGGGTTTATCCGCAGC 7869 | || | ||| ||||||| ||| | | || || || || |||||| | Sbjct 98835 CATGGAATTCCTTCTTTTCACC--TAAGTAGTTTACACTGATGATTGGCTTATCCTTTGG 98892 Query 7870 ACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAA 7929 ||| | || ||| | | ||| | ||||||| ||| || || || ||| Sbjct 98893 ACCTCTAACTACTTTAAATGGCCAGTGAGTCATATCACTTTGTACTGCCTGATCATCAAA 98952 Query 7930 CTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTG 7989 |||||| || |||||||| || ||||||||||||||||||| || || | || ||| Sbjct 98953 CTTTCTACCAATAAGACGTTTAGCATCAAAAACTGTGTTTTCTGGATTTCTAGCAACTTG 99012 Query 7990 GTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGG 8049 ||||| || || || || |||||||| || | |||| ||||| || || || ||||| Sbjct 99013 ATTCTTTGCTGCATCACCAATAAGACGCTC---AGTTTCAGTAAATGCTACATATGATGG 99069 Query 8050 GGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCC 8109 || || || || ||||| ||||| | || ||| ||||| |||||| ||| || || Sbjct 99070 TGTTGTACGGTTACCTTGATCGTTTGGAACAATATCTACAGTATCGTTTCTCCATACACC 99129 Query 8110 GACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGA 8152 || || || || || || |||||||||||||| || ||| || Sbjct 99130 AACACATGAGTATGTGGTACCTAAATCAATACCAATAGCTGGA 99172 >seq27 Length=1279890 Score = 219 bits (242), Expect = 5e-52 Identities = 1160/1827 (63%), Gaps = 53/1827 (3%) Strand=Plus/Minus Query 104368 TAATACATACCCGTTTTTAAACCAGTTTTCCACGCGTACATGTGCATAGACGAAAGTTTT 104427 ||||| || || ||||||| ||| ||||||| | || | |||||||| || | ||| Sbjct 447476 TAATAAATGCCTGTTTTTAGACCTTTTTTCCAACCATAAAAATGCATAGATGATAACTTT 447417 Query 104428 GAAATTGTTGGACTCTCGACGAATAAGTTCATACTTTGACTTTGGTCTATATACACACCT 104487 | || | | | | || | | ||||| | ||| ||| | ||| ||| Sbjct 447416 GCAAAGTTAGCATTTTCCATATGGATGTTCAAAGATTGCGATTGACAAACATATGGACCC 447357 Query 104488 CTATCCGCCGCCATATCGATGATTGTTTTTTGACTCATTTCCCATACGGTTTTATACAAT 104547 ||||| || |||||||| || | ||| ||||| | ||||||||||| || ||||| | Sbjct 447356 CTATCTGCAGCCATATCAATTACTGTCTTTTGCTTGATTTCCCATACAGTCTTATAAAGC 447297 Query 104548 TCCTTAAGATCATCGGGTATATCAATAATGTTTTGAACAGACCCATTTGCCTTCACCATA 104607 || | ||| || || || || || ||||||| | ||||| || | ||| Sbjct 447296 TCACGTATATCCTCCGGAATTGTAAGTATATTTTGAATACTGCCATTA---TTTGCAATA 447240 Query 104608 AGAT-CTTTCATTTCCTTCGA--CCAGAGTCCACGTTCTTTCAAATCGTTTACTAAATGT 104664 | || || | ||| | ||| | ||| | ||| ||||| |||| || || Sbjct 447239 ATATTCTGTTTAAGCCTATCATCCCATAACCCAAGCTCTAGTAAATCATTTAGCAAGTGC 447180 Query 104665 TTGTTTACGACGACAAATTCACCCGCGAGTGTTCGTCTCAAATAGATATTGGTCGTATAC 104724 ||||| || | || ||||| | ||| | | ||| || || | || | Sbjct 447179 GGATTTACTACAAAGAACTCACCAGATAGTACCCTACGATGATAAATGTTCGAGGTGAAT 447120 Query 104725 GGTTCGAAACACTCGTTGTTCCCTAAAATCTGGGATGTGGATGCGGTAGGCATAGGTG-- 104782 || || |||| ||| ||||| |||||||| || || |||||||| || ||||| || | Sbjct 447119 GGCTCAAAACTCTCATTGTTACCTAAAATTTGTGAAGTGGATGCTGTTGGCATTGGAGAT 447060 Query 104783 --CAAGA-AGAAG-ACTATT--CATAGTTCCTT-TCTTAACAAGTTTACGCATGGCATTC 104835 ||| | |||| || | | |||| || || || | |||| || | || | Sbjct 447059 ATCAATAGAGAATTACGAATACCATATTTGGAAATCCTATC---TTTAAGC---GAATCC 447006 Query 104836 CAATCGTATCGACCACTAAACTTTGG-GT--CTCGATCCCACATATCGAATTGAAGAATA 104892 ||||| | | ||| | | ||| || ||| |||||||||| ||||| | |||| Sbjct 447005 CAATCACAAAGTCCAG---AGTCTGGTGTAACTC---CCCACATATCAAATTGTAAAATA 446952 Query 104893 CCTTTACTAAACGGTGACCCCTTAAACGTTTCATAAGGACCGTACATTTCGGCAAGTTCA 104952 || ||||| || || || | | ||||| || ||||| || |||| ||||| ||| Sbjct 446951 CCCTTACTCGCAGGCGAACCGGAATATGTTTCGTATGGACCATATTTTTCTGCAAGCTCA 446892 Query 104953 CACGACGATTCGAGTGATGCGTGGTAGATAGTTTCGAATATATCAATGTTGAGTTTTCTC 105012 || | ||||| | ||| | |||||| ||| || || | | || | || | Sbjct 446891 CAGCTAGCATCGAGAGCTGCATAATAGATAACTTCAAAGATTTGTTTATTTAACTTCTTA 446832 Query 105013 GATTCTTCTGAACCGAATGTCATTCTTAACATGAT-AAACACGTCAGCGAGACCCTGAAC 105071 | | | || || || ||| ||| | | ||| || ||||| ||| ||||| || |||| Sbjct 446831 GCTCCCTCAGACTCGTATGGCATACGAAGCATCATGAAACA-GTCTGCGAGCCCTTGAAT 446773 Query 105072 ACCAATACCGATGGGTCTGTGACGCATATTTGAACGTTTCCCGTTTTCGGTTGGGTAAAA 105131 ||||| || | || | || | | ||| || ||| | | || | | || | Sbjct 446772 GCCAATCCCCAATGGACGATGTCTTAAATTCGAGTTTTTACATTCTT---TAAGAGAATA 446716 Query 105132 GTTTTTA---TCAATAACCTTGTTTAAGTTACGTGTAACCATTTTCGTAACACGATGTAA 105188 | | | ||||| | || || || || | |||| || |||||||| | ||| Sbjct 446715 ATATCCAACGTCAATCAATTTATTCAAATTCCTCGTAATCACCTTCGTAACTTCTTTTAA 446656 Query 105189 CTCTTCATGGTTAAACTCGTTCTTCTCGACATCAACGTATTTTGGTAACGCGATTGATGC 105248 || ||| | |||| || || | ||||||| | ||||| | | || || || Sbjct 446655 CTTATCAAAATCAAACGTCTTGTTATTTTTATCAACGAACTTTGGAAGGCCAATAGACGC 446596 Query 105249 GAGATTACATACGGCGGTTTCTTCCTTATCCGTAAACTCCAGAATTTCTGTACACAAATT 105308 |||||||| ||||| ||| ||||| || | || | |||||||| || || || Sbjct 446595 CAGATTACAAACGGCAACTTCGTCCTTGCTAGTGTATTCTATGATTTCTGTGCATAAGTT 446536 Query 105309 TGATGATTTAATCGTACCAACGTGTTTATGGTTCGACTTTTC--ATTACACGCGTCTTTG 105366 ||| ||| || || | | ||| ||||| |||||| ||| || ||||| Sbjct 446535 ACTTGAAACAATAGTTCCCAAATTTTTCTGGTT--ACTTTTGCTATTTGCAGCATCTTTA 446478 Query 105367 TAAAGCATATATGGGGTTCCCGTTTCACTTTGGGATTTAATAATTGCTTTCCAAATCTCC 105426 ||| ||| |||| || ||||| ||| |||| | | | ||| ||||| | | Sbjct 446477 TAACAAATAAATGGTGTCCCCGTCTCAATTTGAGCCTGTAAGATTAAGAACCAAAGTTTC 446418 Query 105427 GAAGCTGGTACAAC--TTTAGTTGCGATACCTTCAGATTCGTATTTCTCGTAAAGATCTT 105484 ||| | || | ||| || | |||| || || | || || || | | Sbjct 446417 TGCGCT--TTCATCGTTTTCCTTCCACGGCCTTGTTTCTCATACTCTTCATATAGCTTCT 446360 Query 105485 CAAACTCTTTACCGTACACGTCT-GAAAGACCCTTTGCCTG-ATCAGGACAAAACAATGA 105542 ||| || | || | || ||| | || |||| || | ||| || || | | | Sbjct 446359 TAAAATCATCGCCCCAAACATCTTGCAATCCCCT--GCATTCATCTGGGCACATTAGAGT 446302 Query 105543 CCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAA 105602 ||||| ||| ||||| | || |||||||| ||| |||| ||| | ||| | ||| Sbjct 446301 CCAATCTTGATCCTTCTCAACTCTTTCCATGAACAGATCAGGAACCCAAAGGGCAGGAAA 446242 Query 105603 GAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAG 105662 ||| || ||||| ||| |||||| | || |||||| | |||||| | ||| || | Sbjct 446241 GAGATCGCGACATCTCATCTCTTCCTTTCCATGATTCTTCCTAATTTCAATAAACTCTAC 446182 Query 105663 AATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCTTTACG---ACGCCCCGC 105719 || ||| ||||||||||||| ||||| | |||||| | |||||||| | || | Sbjct 446181 AACATCAACGTGCCATGGTTCCAAATAAATTGCAATGGCACCTTTACGCTTCCCTCCACC 446122 Query 105720 TTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGA 105779 ||||| | ||| || || || ||||| || || | ||| ||||| | |||| || Sbjct 446121 TTGATCAATATACCTAGCAGTGTCATTATAAACGCGCAGCATCGGAATTAATCCATTAGA 446062 Query 105780 TGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCC 105839 | | ||||||||||| ||||||| ||| | || | | | || || | ||| Sbjct 446061 TCTCCCATTTGTTCCTCGAATATATGAACCAGTTCCTCTAATATTACTTACTGCCACCCC 446002 Query 105840 AATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTC 105899 || || || || |||||| || || || | ||| ||| || | ||||||| Sbjct 446001 AAGGCCACCTGCAGTCTTACTAATGTTTGCGCATTTAGTTAGTGTGTCAAAGATACCGTT 445942 Query 105900 GATACTATCTTCCTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTGGGTGTACC 105959 || |||||| | || | | ||||| ||||||||||| |||| || || || Sbjct 445941 TATTGAATCTTCTGGAATCCTGAGTAAAAAACAAGATGACATTTGAGGTCGCGGCGTGCC 445882 Query 105960 AGCATTGAACAGAGTTGGTGTTGCATGAATGAACAAACCTTTCGATAACGCTTCGTATGT 106019 | ||| || || || |||||||||||| | || | || ||||||| || ||||| Sbjct 445881 TGAATTAAAGAGTGTGGGTGTTGCATGAGTAAAATATTTTTGCGATAACAACTCATATGT 445822 Query 106020 TTCCAGGACGTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCATATAGAGATA 106079 ||| || | |||||||| | |||||||||| || || ||||| |||| Sbjct 445821 TTCAAGTGCAGCTTCAATATCACCACAATGAATACCACAAGAAACCCGCATCAGAAGATG 445762 Query 106080 TTGGGGTGTTTCAATAATTTCACCGTCAATTTTCTGGAGATACCCTTTTTCAAGTGTTTT 106139 ||| ||| |||| | || || ||||||||| | ||||| | |||| || ||||| Sbjct 445761 TTGTGGTCTTTCCACAACTTTGTTGTCAATTTTAAGAAGATAGGATCTTTCTAGAGTTTT 445702 Query 106140 TAAACCAAAATACCCAAACTCAAAATC 106166 || ||||||| || | |||||||| Sbjct 445701 GAAGGCAAAATAATCATATTCAAAATC 445675 >seq53 Length=208220 Score = 167 bits (184), Expect = 3e-36 Identities = 280/400 (70%), Gaps = 10/400 (3%) Strand=Plus/Minus Query 7450 TCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAA 7509 |||| ||||||||| ||||| ||||| || ||||| || || || ||| || || Sbjct 81096 TCTCTGATCGAAATCCTCACCTCCCAAATGGGTATCACCACTTGTAGCAACGACCTCGAA 81037 Query 7510 GATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAAT 7569 | || |||||| | || | ||||||||||| ||||||||||||| || | | Sbjct 81036 AACGCCGTTATCAATGGTCAAGAGAGAAACATCAAAAGTACCACCACCCAAATCGTATAC 80977 Query 7570 GAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGT 7629 | | | || | || | | ||||||| | ||| | || || || || || || Sbjct 80976 TAAAATGCTCTTCTCAGCTT------TCTTATCCAAACCAAAAGCAATTGCTGCTGCTGT 80923 Query 7630 TGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCG 7688 ||| |||||||||||||| | ||| |||| |||||||||| | ||||| || || | Sbjct 80922 TGGCTCATTAATAATACGGATTACA-TTCAAACCAGCAATAGCACCAGCATCCTTGGTAG 80864 Query 7689 CTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCT 7748 | || || || | ||| |||||||| || ||||| || | || || | | | |||| || Sbjct 80863 CCTGACGCTGAGCATCATTAAAGTAAGCTGGGACAGTAATTACTGCATGCTTTACTTCCT 80804 Query 7749 TACCGAGATACGATTCCGCGATATCTTTCATTTTG-GTAAGAACCATCGATGAAATCTCT 7807 |||||||||| | || || || |||||||| ||| | ||| ||||| | |||| |||| Sbjct 80803 TACCGAGATAAGCCTCAGCAATTTCTTTCATCTTGAGCAAG-ACCATAGCGGAAACCTCT 80745 Query 7808 TCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTT 7847 || | || || || ||| | ||||| |||| | ||||| Sbjct 80744 TCTGGGGCTAATTGCTTCTTCTCACCCTTAACAGAAACTT 80705 Score = 165 bits (182), Expect = 1e-35 Identities = 381/572 (67%), Gaps = 9/572 (2%) Strand=Plus/Minus Query 6611 TCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTA 6670 || |||||||| | || | ||| ||||||||||| || || |||||||| ||||||||| Sbjct 81926 TCTATGTCTTCCTGTGAGAGTCTACCCTTATCATTTGTGATAGTAATCTTCTCGGATTTA 81867 Query 6671 CCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTT 6730 || | ||||||| | ||||| || | |||||||||| | ||||| || || | Sbjct 81866 CCAGTACCCTTATCCTTTGCACTAACTTGTAAAATACCATCAGTATCAATTTCAAAAGTA 81807 Query 6731 ACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCA 6790 || | |||||| || ||| || || || | ||| || || | | || ||| | || Sbjct 81806 ACCTCAATTTGGGGAACACCTCTTGGAGCTGGTGGGATTCCAGAAAGCTCGAATTTTCCG 81747 Query 6791 AGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCA 6850 || | |||||||| | | | | ||| ||||| ||||| || | || || || Sbjct 81746 AGGAGGTTGTTATCCTTAGTCATTGGACGCTCACCCTCATAAACCTGGATAAGTACAGCT 81687 Query 6851 GGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTT 6910 || ||||||||||| || ||| | ||| ||||| | ||||| || ||| Sbjct 81686 GGCTGATTATCTTGGTAAGTACTGAAAACTTGGCTCTTCTTGGTTGGAACAACAGTGTTT 81627 Query 6911 CTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTC 6970 || ||| | | ||||||| ||||| | ||| || | || | || | ||| || Sbjct 81626 CTACCAATGAGCTTTGTCATAACTCCACCAACAGTCTCAATACCTAAAGTTAAAGGAGTA 81567 Query 6971 ACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCT 7030 || ||||| | ||| | || || | | | |||||||| | |||||| | ||| Sbjct 81566 ACATCCAATAATAATAAATC----AC---TACCT--CCTTCACCTGCTAAGATACCAGCT 81516 Query 7031 TGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTA 7090 || || | || || || ||||| || ||||| |||||||| | | || | || || Sbjct 81515 TGTACGGCAGCACCATAAGCGACGGCTTCATCTGGGTTAATTCCTCTGTTTGGCTCCTTT 81456 Query 7091 CCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACC 7150 || | ||| | ||| | || |||||| || ||||| || || || ||||| ||| Sbjct 81455 CCATCAAAGAACTCCTTGATCAAGGCTTGAATCTTAGGGATACGAGTAGAACCACCTACC 81396 Query 7151 AAAACGATTTCATTCACTTTCGATTTATCGAT 7182 |||||||| |||| |||| || || | ||| Sbjct 81395 AAAACGATCTCATCTACTTCAGACTTTTTGAT 81364 >seq36 Length=268453 Score = 159 bits (176), Expect = 4e-34 Identities = 337/499 (68%), Gaps = 9/499 (2%) Strand=Plus/Plus Query 183161 CCGGTACCAATACCTTCAGTTCCATTTACCAAAACGGTCGGTAATATAGGAACATAATAG 183220 || |||||||| || ||||| ||||||||||||| | || | ||| ||||||||||| Sbjct 54565 CCTGTACCAATTCCATCAGTACCATTTACCAAAATCATTGGAATTATTGGAACATAATAT 54624 Query 183221 TCAGGTTCGATTTGTTTACCGTCGTCGTCGAGATAGTTTAATACTGGATCATC----TTT 183276 |||||| ||||||| || || || | | ||| |||||| |||||||| | | Sbjct 54625 AAAGGTTCAATTTGTTGTCCATCATCATATAAATAAGTTAATAAAGGATCATCAGCCTCT 54684 Query 183277 GGGATCAAAAAGTATTCTCGCGTTTTTAGTCAATTTTGTAAATATATACCTGGTTTGACT 183336 |||| ||| ||| || | ||||| | || ||||||||||| | | ||| Sbjct 54685 GGGA---AAATATAT-CTAGTCCATTTAGATAGCTTAGTAAATATATAACGAGCAGCACT 54740 Query 183337 CGCGTCTTTACCACCCATGAGACGTGTACCAAATTGACCACATGGTTCGAGTAAATTAAT 183396 || ||||| ||||| | |||||||||||||||||||||| | | ||| | Sbjct 54741 TGCATCTTTTCCACCTTCTTTTCTACTACCAAATTGACCACATGGTTCTAACAGATTTAG 54800 Query 183397 ATTATTCGACCCCGTAAAATTATGTGCTAATTTTACAATTGTATCTGCCAAAGAGACTTC 183456 |||||| || |||||| || || | || ||||| ||| | || || ||| Sbjct 54801 ATTATTACTTCCAACAAAATTTTGAGCCATATTAACAATAGTACTTTGTAATGATGATTC 54860 Query 183457 ACCGTGGTGATACGATGTTTTTTCCGAAACGTATGCGGCTAATTGCGCAACCTTCATTTC 183516 || || ||||| | | | ||| | ||| || | |||||||| ||||| || | ||| Sbjct 54861 TCCATGATGATAAGCACTATGTTCAGCAACATAACCAGCTAATTGTGCAACTTTAAGTTC 54920 Query 183517 AGATGTAAGATTCTTTGTGAAACACGCGTATAACACTTTTCGTTGGGATGGTTTTAAACC 183576 | |||| || ||| | || || | | ||||||| ||| ||||||||||| Sbjct 54921 ATTATTAAGCTTTTTTTTAAATGTTGCAAAAAGTACTTTTCTTTGTCCAGGTTTTAAACC 54980 Query 183577 ATCTGAAACGTGTGCAATCGACCTTTTCAAATCAGCAAGACTGAAATTTACAAGATCTTT 183636 |||| | | | || ||| || || | |||| ||| || |||||| ||||| Sbjct 54981 ATCTAATAAATTTGGAATAGATCTAGTAGTATCATATCTACTAAATAATACAAGTTCTTT 55040 Query 183637 ATGAATAAAATCAGAAATA 183655 ||||||||||||| ||||| Sbjct 55041 ATGAATAAAATCA-AAATA 55058 >seq28 Length=318753 Score = 104 bits (114), Expect = 3e-17 Identities = 209/303 (69%), Gaps = 13/303 (4%) Strand=Plus/Plus Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 |||| ||||||| ||| ||||||||||||| ||| || | || | |||||| | | | Sbjct 271015 GCACCAACATTCATAATTCCATTTGCATCAATATCAAAGGTGACTTCAATTTGAG--GAA 271072 Query 6749 CCCCTC--GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCG 6806 |||||| ||||| | ||||| ||| | | |||||| ||||| || | ||||| | Sbjct 271073 CCCCTCTGGGTGCTGGAGGAATTCCCATCATTTCAAATTGTCCAAGCAACTTATTATCAG 271132 Query 6807 TCGC--CTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTG 6864 || |||| | ||| |||| | ||||||||| || || |||||| ||| Sbjct 271133 CAGCAAATTCT--CTTTCTCCTTGGAAAACTTTAATTCCAACTTGAGTTTGATTGTCTGC 271190 Query 6865 TGCCGTTGAGAAGA-TTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCG 6923 || || ||||| | || | ||||| |||| || || || |||||||| ||| | Sbjct 271191 AGCAGTGGAGAATACTTGGCTCTTT-TTAGTGGGTATTGTGGTATTTCTGTTAATTAATC 271249 Query 6924 GGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTA 6983 | || | || ||||||| |||||| | || | ||| | ||||| ||||| ||||| Sbjct 271250 GAGTAAAAACTCCACCCAAAGTTTCAATACCTAAAGATAAGGGTGTAACGTC---GAGTA 271306 Query 6984 ACA 6986 ||| Sbjct 271307 ACA 271309 Score = 86.0 bits (94), Expect = 8e-12 Identities = 197/291 (68%), Gaps = 8/291 (3%) Strand=Plus/Plus Query 7493 GTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCA 7552 || ||||| |||||||| | || || ||| | ||| | |||| ||| || ||||| Sbjct 271816 GTTGCTTTAACTTCAAACACTCCGCCAAGAATCTCTAAAATAGAAATATCGAAAGTACCT 271875 Query 7553 CCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTAC 7612 || |||| ||| ||| | || | || | | | ||| | | || || | ||||| Sbjct 271876 CCTCCCAAATCATAAAC---TGCGATTGTTTTGCCATCT--GCTTTT-TCCATTCCGTAT 271929 Query 7613 GCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGT 7671 || | ||| || || ||||| |||||||| || | ||| || || || || |||| Sbjct 271930 GCAAGAGCTGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAG-CCTGCTATAGA 271988 Query 7672 TGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGAC 7731 | ||||| || || ||||| || || ||||| |||||||| || || || || | || Sbjct 271989 GCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTAATAAC 272048 Query 7732 CGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTT 7782 || | | | || | |||| ||||| | ||| || | ||||||||||| Sbjct 272049 AGCATGCTTTACACTTCTACCAAGATAAGTTTCGGCAGTTTCTTTCATTTT 272099 >seq39 Length=873289 Score = 96.9 bits (106), Expect = 4e-15 Identities = 280/420 (67%), Gaps = 27/420 (6%) Strand=Plus/Plus Query 11280 ATCAAATCTACCGGGGCGTAATAACGCATCGTCGAGTATATCGATACGGTTTGTTGCACC 11339 ||||||||| || || ||| ||| ||| || | || ||| ||| |||||| | | Sbjct 743678 ATCAAATCTTCCTGGACGTGTTAATGCAGGATCTAATACATCAGAACGATTTGTTCCTGC 743737 Query 11340 TATAACAACAATTTCAGTTTCATTCTCGAAA-CCATCCATTTCTGTTAATAAT-TGGTTA 11397 || ||| | | | || | | ||| ||| |||||||||||| || ||| || ||| Sbjct 743738 TAAAACTATTACTCCATTATT-TTCAGTAAATCCATCCATTTCTAC-AAGAATCTGATTA 743795 Query 11398 ATTGTTTGTTCACGCTCATCGTTTG------CCGCAAACCCATTCATACTTCT------T 11445 | || ||| | |||||| || | | ||||| ||| | ||| | | Sbjct 743796 AGAGTGCTTTCTCTCTCATCATTAGATGAAGCAGCAAATCCACCCC--CTTTTGCACGCT 743853 Query 11446 TTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACG--GTTGATTTTCACGTG 11503 ||||| |||| |||||||||||||| ||||| | ||||| | | | ||||| | || Sbjct 743854 TTCTT-CCAACTGCATCAATTTCATCAATAAAAACAATACTTGGAGATAATTTT--CTTG 743910 Query 11504 CCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACG 11563 || | ||||| || | ||||| |||| || | || ||||| || |||| || Sbjct 743911 CCTGTGAAAATAATTCTCTTACTCTACTTGCACCCATTCCAACAAAAATCTCAATAAA-- 743968 Query 11564 ATGAC--CCCGAACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAA 11621 || || || || | || ||| || || || |||||| || | ||| |||||| Sbjct 743969 ATCACTTCCAGATATATAAAAAAATGGTACATTAGCTTCACCAGCAACAGCTTTTGCTAA 744028 Query 11622 AAGTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCACC 11681 | ||||||||| ||||||||| ||| ||||| ||||| |||||||||| ||||| Sbjct 744029 TAATGTTTTACCGGTACCTGGTGGTCCTACCAATAAAGCACCTTTTGGTATTTTTGCACC 744088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132379224520