Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001483515.1_202015-12- 30] 53 sequences; 9,059,225 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq36 82.4 9e-11 >seq36 Length=268453 Score = 82.4 bits (90), Expect = 9e-11 Identities = 115/159 (72%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 168430 TTACCACGGAGTGGAAATACCCCATAATGATCTCTACCCACGACGGAGAGACCAGCGACA 168489 |||||||| ||||||||||| ||| ||| |||||||| || | || | || || | | Sbjct 55651 TTACCACGTAGTGGAAATACTCCAAAATAGTCTCTACCAACAATAGATAATCCTGCAAGA 55710 Query 168490 GCGAG-AGTTTTCGCTGAATCACCCTCTGTCACGATGAGTGTACACTTTCCAGACTGTGC 168548 | || |||||| || |||||||| || || | || || ||||| ||| || || | Sbjct 55711 -CAAGAAGTTTTAGCAGAATCACCTTCAGTAAGTATAAGAGTACATTTTTTGGAATGGGG 55769 Query 168549 CGTACCAGCTTTGTTCGCATCGTCCAATTTGGGGATACC 168587 |||||||| ||| ||||| || | ||| ||||| || Sbjct 55770 TCCACCAGCTTCGTTTGCATCTTCAAGTTTTGGGATTCC 55808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975609803400