Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001483515.1_202015-12- 30] 53 sequences; 9,059,225 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq42 152 4e-32 seq10 152 4e-32 >seq42 Length=592675 Score = 152 bits (168), Expect = 4e-32 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 || |||||||| | ||||| |||||||| || ||||| || | || |||||| |||| Sbjct 88747 AATACTAAATGTAAAGTAGACTCTTTTTGAATGTTGTAGTCAGAGAGAGTTCTACCATCC 88688 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 || ||||| || |||||||| |||||||| |||||||| || || || || || |||||| Sbjct 88687 TCTAATTGTTTTCCTGCAAAGATCAAACGTTGTTGATCAGGTGGGATTCCCTCCTTATCT 88628 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 ||||| ||| || ||| | || | || || || | ||| ||||| | ||||| || Sbjct 88627 TGAATCTTTGCCTTAACATTCTCAATTGTATCTGAAGGTTCAACTTCCAAAGTGATAGTC 88568 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || ||||| || ||||| |||||||| Sbjct 88567 TTTCCTGTCAAAGTCTTGACAAAAATCTGCAT 88536 >seq10 Length=470636 Score = 152 bits (168), Expect = 4e-32 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 || |||||||| | || || || || || |||||||| || | | |||||| |||| Sbjct 335764 AATACTAAATGCAAAGTGGACTCCTTCTGGATATTGTAGTCAGATAGAGTTCTACCATCT 335823 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 ||||||||||| || ||||| |||| |||||||||||| || |||||||| || ||||| Sbjct 335824 TCCAATTGCTTTCCAGCAAAGATCAGACGCTGTTGATCAGGAGGAATGCCCTCCTTATCC 335883 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 || || ||| |||||| | || | ||| || || | ||| ||||| | |||| || Sbjct 335884 TGGATCTTTGCCTTTACATTCTCAATAGTATCGGAAGGTTCAACTTCCAATGTGATGGTC 335943 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || ||||||||||| ||||| || ||||| Sbjct 335944 TTTCCTGTTAAAGTTTTGACAAAAATTTGCAT 335975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396278144028921