Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001483515.1_202015-12- 30] 53 sequences; 9,059,225 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq29 356 2e-92 seq12 262 3e-64 seq53 242 2e-58 seq28 152 3e-31 seq42 150 1e-30 seq36 141 6e-28 seq24 132 3e-25 seq10 122 6e-22 seq27 105 4e-17 >seq29 Length=117188 Score = 356 bits (394), Expect = 2e-92 Identities = 670/974 (69%), Gaps = 27/974 (3%) Strand=Plus/Minus Query 475310 GGAACTCATGACGTAACTTTACTATCACTCGAAGATGGTCTTTTCTCTGTAAGAGCAACA 475369 || ||| ||| ||| | ||| || | | ||||||||| |||| || | ||| || Sbjct 98574 GGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTTAAAGCTACC 98515 Query 475370 GCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGGTGTGTT 475429 ||||| ||| | || | |||||||||||||||||||| ||||| || || ||||| Sbjct 98514 GCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAACAGACTCGTGGAATTCTGTGTA 98455 Query 475430 GAAGATTTCAAGAGGAAAAATAAAGTTGATCTTTCAACATC---TGCTAAAGCATTAAGA 475486 ||||||||||||| || |||| || | || ||| || ||||| ||| |||||| Sbjct 98454 CAAGATTTCAAGAGAAAGAATAGAGGTATGGATTTAACTTCAAATGCTAGAGCTTTAAGA 98395 Query 475487 CGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACT 475546 | || |||||| ||||| ||||| ||| || || | || ||| |||||||| |||| Sbjct 98394 AGACTCAGAACTCAATGTGAGCGTGCAAAGAGAACTTTGTCATCTTCTACTCAAGCTACA 98335 Query 475547 GTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAA 475606 |||| | ||||| || | ||| || ||||||||| | || | || || | | Sbjct 98334 ATTGAGTTAGATTCACTCTATGAGGGTATTGATTATTCAGTTGCCATCAGTAGAGCCAGA 98275 Query 475607 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTC 475666 || ||||| | || ||||| ||| | ||| | | || ||||| |||| ||| Sbjct 98274 TTCGAAGAACTCTGCGCTGATTACTTCCGTGCAACTTTAGCTCCAGTTGAGAAAGTACTC 98215 Query 475667 AGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACA 475726 | ||| || | ||||| | || ||||| |||| | || || ||||| ||| Sbjct 98214 AAGGATGCTGGTATGGACAAGAGATCTGTACATGATGTTGTATTGGTTGGTGGTTCTACA 98155 Query 475727 AGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATG-A 475785 | |||||||| | | || || || ||||| |||||| || | || | Sbjct 98154 CGTATTCCAAAGGTTCAGGCCTTGATTCAGGAATTCTTTAACGGTAAAGAGCCA--TGCA 98097 Query 475786 AAGTG-TAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTAT 475844 ||| | ||||| |||||||||||||| ||||| |||||||| ||||| ||||| ||| Sbjct 98096 AAGCAATCAATCCAGATGAAGCTGTTGCTTATGGTGCTGCTGTACAAGCTGCTATCTTAA 98037 Query 475845 CAGGT---CAATCA---GACG---AGAAACTAAATAATATTGTACTTGTTGACGTAACTC 475895 ||| ||||| | || || | || || ||||| | ||||| ||| Sbjct 98036 ATGGTGAGCAATCCTCTGCCGTACAGGATCTCT-TATTATTGGA--TGTTG------CTC 97986 Query 475896 CACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATA 475955 || | ||| | ||| | ||||| | ||| || ||||||| || |||||||| | |||| Sbjct 97985 CATTATCACTCGGTTTAGAAACTGCTGGTGGTGTTATGACCAAGCTTATTGAACGTAATA 97926 Query 475956 CTCCTATCCCATGCAAAAAAT-CAAAAGTATTTTCCACTTATTCTGATAATCAAACAACT 476014 | |||||||| ||||| || || |||| || | |||||| ||||||| || | | Sbjct 97925 CAACTATCCCA-GCAAAGAAGACACAAGTCTTCACTACTTATGCTGATAACCAGAGCGGT 97867 Query 476015 GTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGA 476074 || |||||| | | ||| ||||| ||| | ||||| ||||| | |||||| Sbjct 97866 GTCTTGATCCAAGTTTATGAGGGTGAGAGAGCCATGACTAAGGATAACCATCTCCTTGGA 97807 Query 476075 ACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACT 476134 | || ||||||| |||||||| || || || ||||| || || ||||||||||| ||| Sbjct 97806 AAGTTCCATCTTGATGGTATTCCACCAGCACCAAGAGGTGTACCACAAATTGAAGTCACT 97747 Query 476135 TTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAACAAG 476194 |||||||||||||| |||||||| | ||||| ||||| ||||||| | | ||| Sbjct 97746 TTTGATATTGATGCTAATGGTATCTTGAATGTATCTGCTGTTGATAAAAGCACTGGTAAG 97687 Query 476195 AGTAAAAATATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGT 476254 || | || || |||||||| ||| || |||||||| | | || | ||| ||||| Sbjct 97686 AGCAGCAAGATCACTATTACTAACGATAAGGGTAGATTATCAAAGGACGATATTGAACGT 97627 Query 476255 ATGGTTGATGAAGC 476268 |||||| |||| || Sbjct 97626 ATGGTTAATGATGC 97613 Score = 280 bits (310), Expect = 1e-69 Identities = 394/551 (72%), Gaps = 3/551 (1%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || ||||||||||||||||| || || ||| ||||| | ||| ||| ||| | || Sbjct 99168 GCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAACGATACT 99109 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 ||||| || || | || || |||||||| | ||||||||||||||||| | |||||| Sbjct 99108 GTAGATATTGTTCCAAACGATCAAGGTAACCGTACAACACCATCATATGTAGCATTTACT 99049 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 |||||||| | ||||||||| ||||| || || |||||| ||| ||||| | || Sbjct 99048 GAAACTGAGCGTCTTATTGGTGATGCAGCAAAGAATCAAGTTGCTAGAAATCCAGAAAAC 98989 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || |||||||||||||| | | |||||| | || ||||||||| | || ||| | Sbjct 98988 ACAGTTTTTGATGCTAAACGTCTTATTGGTAGAAAGTTTGATGATCAGGCAGTACAAAGT 98929 Query 474569 GATATGCGTCATTGGCCTTTTAAGGT-GATAAATGT--TGGTGGTAAACCATATATAGAA 474625 |||||| ||| ||||| ||||| || | || | || | ||| ||| || Sbjct 98928 GATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGATAAGCCAATCATCAGT 98869 Query 474626 GCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685 | || || |||||||| || |||| | ||| |||||||| | ||||||||| Sbjct 98868 GTAAACTACTTAGGTGAAAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGTTTTA 98809 Query 474686 GCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATT 474745 || ||||| ||| | | |||| | || | || | | |||| ||| || Sbjct 98808 CAAAAGATGAAGGAAATCTCTGAAGCATACTTGGGTCGCCAAATTAAGAATGCTGTAGTT 98749 Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 ||||||||||| ||||| ||||| || |||||||||||||| || ||||| || |||| Sbjct 98748 ACTGTTCCAGCTTATTTCAATGACTCACAACGTCAAGCAACAAAGGATGCAGGTGCAATT 98689 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || ||| | ||||| | | || ||||| || ||||| ||||| || ||||||||||| Sbjct 98688 GCTGGTTTGAATGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTGCTTATGGT 98629 Query 474866 CTTGATAAGAA 474876 ||||||||||| Sbjct 98628 CTTGATAAGAA 98618 >seq12 Length=114418 Score = 262 bits (290), Expect = 3e-64 Identities = 687/1029 (67%), Gaps = 63/1029 (6%) Strand=Plus/Plus Query 296689 GGAACTGGTTTTGTGCATATTGCTCCTTCACATGGAGAGGATGATTTCAGAGTTTGTTGT 296748 || |||||| |||| ||||| |||||| | ||| || ||||||| ||||||||| Sbjct 1459 GGTACTGGTATTGTACATATGGCTCCTGCTTTTGGTGAAGATGATTATAGAGTTTGTGTA 1518 Query 296749 CTTAATAATATTATTGATTCGAGAAATACGCGAGGCAATTTAATTGATGTA--ATTGATG 296806 |||| |||||||||| ||| | |||||| |||| || ||| Sbjct 1519 AGTAATGGTATTATTGAT------AATCATGGTACAAATTTACC--ATGTCCTATGGATT 1570 Query 296807 ATGATGGTAAATTTACAAATCAAATTCATGATTATTTTGGTATATATTTTAGGGATGCTA 296866 | |||||| |||||| | | || ||||| || |||| |||| ||| || Sbjct 1571 CTAATGGTAGATTTACTGAACCTGTTAGTGATTTAAAAGGAATATGGTTTAAAGATTCTG 1630 Query 296867 ATAATCTTATTATTAAAGATTTGAAACATAAAA--AG-TTATTGTTTGATTTTAAACAAT 296923 |||| |||||| |||| || ||| | ||| || ||||| |||| || | | Sbjct 1631 ATAAAATTATTAAACAAGAATTAAAAAAAAAATCCAGATTATTAACTGATAATACA---T 1687 Query 296924 ACAAACATTCTTATCCTTTTTGTTATAGAACAGATACTCCACTTATTTTTAAAATTTGTT 296983 | |||||||||||||| |||| ||| | ||||| || ||| | | | |||| Sbjct 1688 GTATGCATTCTTATCCTTTCTGTTGGAGATCTGATACACCT-TTACAATATAGAGCTGTT 1746 Query 296984 C-TGGTTGGTTTTTAAACGCATCaaatgaaaaattcagagaaaaaatgatgattaataat 297042 | | ||||||| | || | |||| || | ||| ||| | | ||||||||| Sbjct 1747 CCTTCTTGGTTTATTAATGT------TGAATCTTTAAAAGATAAATTATTAATTAATAAT 1800 Query 297043 tctaaaataaattGGATGCCATCAAATAT-TGGTACAAATCAT-TTTGATAATTGGTTAC 297100 |||| |||||||| ||| || ||| | | ||| | ||| |||||||||||| Sbjct 1801 GAAAAAACTAATTGGATTCCA--AATTATGTTAAAGAAAAAAGATTTCATAATTGGTTAC 1858 Query 297101 AATCTTCAGTGGATTGGTGTATTTCAAGAAGTAGATATTGGGGAACACCAATTCCAATTT 297160 || | | ||||||||| || | | | | | |||||||||||| || || || | Sbjct 1859 AAGATGCTAGAGATTGGTGTGTTAGTCGTAATCGTTTTTGGGGAACACCTATACCTATAT 1918 Query 297161 GGAAATCTGATGATGGTGAAGAAATAATTTGTATTGGTTCACTTGAAGAATTAAAAG--- 297217 || ||| || ||| | | || | ||||||||| |||||||||||||| Sbjct 1919 GGGTATCAGAAGATTATACAATTATTAAATGTATTGGTAGTATTGAAGAATTAAAATCTT 1978 Query 297218 --------AATTTTCAGGAATTGATAATATTAATGATTTACATATTGATAAAATTGATCA 297269 ||||| | || ||| | ||||||||| ||||| | || |||||| | Sbjct 1979 TAGCATCAAATTTAAAAGA--TGAAGAAATTAATGATATACATCGTCATTTTATTGATTA 2036 Query 297270 AATAAAAATTCCTTCTCGTAAAGGAAA-----AGGCATG-TTATCTCGTGTTACCGGTGT 297323 || |||||||| || | |||||| | || ||| | || | || Sbjct 2037 TATTGAAATTCCTGATCCAAGAGGAAATAATTATCCACCATTAAAAAGAATTGAAGAAGT 2096 Query 297324 TTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTATCCTTTTGA 297383 ||| ||||||||||||||||| |||||||||||||||| ||| ||||||| ||||| Sbjct 2097 TTTTGATTGTTGGTTTGAATCTGGTTCTATGCCTTATGCATCTATTAATTATCCATTTGA 2156 Query 297384 AAATTCCGAAATTTTAGACACTTCACAAGATTATATTGCAGATTTTATAACAGAATCAAT 297443 |||| ||| | || | | | | ||| | |||||||||| | ||| | Sbjct 2157 AAATCAAGAATTATTTAATAAT-----ATATT-TCCTGCAGATTTTGTTGGTGAAGGTTT 2210 Query 297444 TGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCTATATTTAACAA 297503 |||||||||||||| ||||||||||| ||| | || | || ||||| ||||| | | Sbjct 2211 AGATCAAACAAGAGGATGGTTTTATACATTAATGGTATTATCAACAGCATTATTTGATCA 2270 Query 297504 ACCAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTGATGGACAAAAAAT 297563 |||||| ||||||||| | ||||||| || | ||| ||| ||||||| ||||||| Sbjct 2271 ACCAGCTTTTAAAAATATTATTGTTAATGGTTTAGTTTTAGCATCTGATGGTAAAAAAAT 2330 Query 297564 GTCAAAAAG--TAAAGGTAATTATCCTGATCCA-AATATTTTGATGGATAAATATGGTGC 297620 ||||||||| |||| ||||||||||||||| | || ||| | ||||||||||||| Sbjct 2331 GTCAAAAAGATTAAA--AAATTATCCTGATCCATTAGATATTG-TTAATAAATATGGTGC 2387 Query 297621 AGATACTTTACGTCTTTATTTATTATCAA--CACCTGTAGTTAAAGCCGAATCAATTAAA 297678 |||| ||||| | |||||| | || || |||| || |||| ||| ||| | | | | Sbjct 2388 AGATTCTTTAAG--ATTATTTTTAATTAATTCACCAGTTGTTAGAGCAGAAACTTTAAGA 2445 Query 297679 TTTGATGAA 297687 ||| | ||| Sbjct 2446 TTTAAAGAA 2454 Score = 214 bits (236), Expect = 1e-49 Identities = 348/494 (70%), Gaps = 18/494 (4%) Strand=Plus/Plus Query 295795 GATGGACCTCCATTTGCTACAGGA--ACTATGCATTATGGACATATTTTAGTCTCAACTA 295852 |||||||||||||||||||||||| || | |||||||| ||||| | | ||| Sbjct 628 GATGGACCTCCATTTGCTACAGGATTACCA--CATTATGGTCATATACTTGCAGGTACTG 685 Query 295853 TTAAAGATACCATGACTAGATATTTAACAATGAATGGTTATCAAGTTAATATGGGAATTG 295912 |||||||| | || |||||| ||| || || ||| | | | | || ||| Sbjct 686 TTAAAGATGTAGTTACAAGATATGCAACTCAAAAAGGATATTATTGTGAAAGAAGATTTG 745 Query 295913 GTTGGGATTGCCATGGAGTTCCAATTGAA-ATG---TTGGCTaaaaaaaCTATCGGATAT 295968 | ||||||||||||||| | ||| | ||| ||| ||| | |||| || | || Sbjct 746 GATGGGATTGCCATGGATTACCAGTAGAACATGAAATTG-----ATAAACAATT--AAAT 798 Query 295969 ATCACAA--AGA-AAGATTTATTGGAATACGGTATTGATCGTCATAATGATATTTGTCGT 296025 ||||||| ||| ||||| | || | | ||||| ||| | ||||||| ||| | Sbjct 799 ATCACAAGTAGAGAAGATGTTTTAAATAAAGGTATAGATTTTTATAATGAATCATGTAGA 858 Query 296026 GATATGGTATTAAAATGTACTGATAAATGGTATTCTGATTTTGAGAGAATTGGAAGATGG 296085 || ||||||| || |||| | ||||| | || | |||| ||| ||||||||| Sbjct 859 TCAATTGTATTAAGATATACTCAAGAATGGAAATCAACTGTTGAAAGAGTTGGAAGATTA 918 Query 296086 ATTGATATTAATAATGAATATAAAACAATGGATAAAAATTTTATGGAATCTGTTATTTGG 296145 |||||| || |||||| |||||||| |||||| |||||| ||| || |||| ||| Sbjct 919 ATTGATTTTGATAATGGTTATAAAACTATGGATTTAAATTTCATGCAAACTGTATGGTGG 978 Query 296146 TCATTTAAACAACTTTATGAAAAGGAAATGATTTTTGAAGGTTATAAAGTTATGCCTTAT 296205 |||||||||||||| ||| || | | ||| | || ||||| ||| ||||| ||| Sbjct 979 GTATTTAAACAACTTTTTGATCAGAATCTTGTTTATAGAGCTTATAGAGTAATGCCATAT 1038 Query 296206 TCTACTGGTTGCAATACACCATTATCTCATTTTGAGGCAAAACAAAATTATAAAGAGATT 296265 ||||| | || ||||||||||||| ||||||| || |||||||||||| || Sbjct 1039 TCTACAGCATGTGCTACACCATTATCTAATTTTGAATGTAATTTAAATTATAAAGATGTT 1098 Query 296266 ATTGATCCATCTGT 296279 | |||||||||||| Sbjct 1099 AATGATCCATCTGT 1112 >seq53 Length=208220 Score = 242 bits (268), Expect = 2e-58 Identities = 395/559 (71%), Gaps = 10/559 (2%) Strand=Plus/Plus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 |||||||| |||||||| |||||||| ||||| | | | | | ||||||| |||| Sbjct 80413 ATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAGAGTA 80472 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 || || ||| | ||||| ||||||||| | | |||||||||||||| || || ||||| Sbjct 80473 GAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCACTGAT 80532 Query 474452 ACTGA-ACATCTTATTGGAGATGCTGCTAAATATCAAGCTGC-ATCTAATCCTGTTAATA 474509 ||| | || | ||||| || | || || |||||||| | ||| ||||| ||| | | Sbjct 80533 GATGAGAGAT-TGATTGGTGAATCAGCCAAGAATCAAGCTACTATC-AATCCAGTTCAGA 80590 Query 474510 CTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTG 474569 || | || || | || ||| | ||||||||| |||| | ||| |||||||| | Sbjct 80591 CTTTGTTCGACGTAAAGAGACTTATTGGTCGTCGTTTTAAGGATGATTCTGTCCAAAAGG 80650 Query 474570 ATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCAA 474629 ||| | | | || | | || | || || | | | || || || ||| ||| Sbjct 80651 ATAAGACTTTGTTACCATATGAGATTATTAACAAAGATAGCAAGCCTTACATACAAGT-- 80708 Query 474630 TACACGCA--GGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGC 474687 | | | ||||| | || ||||| | || ||| | |||| | ||||| || Sbjct 80709 TTCTGTTAAGGGTGAGAAGAAGCAATTAGCCCCAGAAGAGGTTTCCGCTATGGTCTTGCT 80768 Query 474688 CAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTA 474746 ||| |||||| ||| || ||| | ||||| || | ||||||| |||||||||||| Sbjct 80769 CAAGATGAAAGAAATTGCTGAGG-CTTATCTCGGTAAGGAAGTAAAGCATGCAGTAATTA 80827 Query 474747 CTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTG 474806 |||| ||||| || ||||||||| |||| ||||| || || || ||||| || |||| Sbjct 80828 CTGTCCCAGCTTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGTGCTATTG 80887 Query 474807 CAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTC 474866 | ||| | ||||| | |||||||||||||| ||||||||||| ||| |||||| |||| Sbjct 80888 CTGGTTTGAATGTAATCCGTATTATTAATGAGCCAACAGCAGCAGCAATTGCTTTTGGTT 80947 Query 474867 TTGATAAGAATTCTGACAA 474885 | |||||||| |||| || Sbjct 80948 TGGATAAGAAAGCTGAGAA 80966 Score = 140 bits (154), Expect = 2e-27 Identities = 260/380 (68%), Gaps = 9/380 (2%) Strand=Plus/Plus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852 || || |||||||| || || ||||| ||||| || ||||| | ||| ||| ||||| || Sbjct 81478 AACCCAGATGAAGCCGTCGCTTATGGTGCTGCCGTACAAGCTGGTATCTTAGCAGGTGAA 81537 Query 475853 TCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTT 475912 || || | | | || ||||| | |||| ||||| | | |||||| || Sbjct 81538 GGAGGT-AGTGATTTATTATTATTGGA--TGTT------ACTCCTTTAACTTTAGGTATT 81588 Query 475913 GAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAA 475972 || || ||||| || ||||||| || || |||| ||||| ||| | | ||| ||| Sbjct 81589 GAGACTGTTGGTGGAGTTATGACAAAGCTCATTGGTAGAAACACTGTTGTTCCAACCAAG 81648 Query 475973 AAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTT 476032 || |||| || ||||| |||||||| || ||||| ||||| | | | Sbjct 81649 AAGAGCCAAGTTTTCAGTACTTACCAAGATAATCAGCCAGCTGTACTTATCCAGGTTTAT 81708 Query 476033 GAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGT 476092 || ||||| | | | ||||| ||||| ||| || |||| || | ||| || Sbjct 81709 GAGGGTGAGCGTCCAATGACTAAGGATAACAACCTCCTCGGAAAATTCGAGCTTTCTGGA 81768 Query 476093 ATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAAT 476152 || || || ||||| ||||| ||||| |||||||| ||||||||||| |||||| | || Sbjct 81769 ATCCCACCAGCTCCAAGAGGTGTTCCCCAAATTGAGGTTACTTTTGAAATTGATACTGAT 81828 Query 476153 GGTATTCTTAATGTTACTGC 476172 |||||| | | |||| ||| Sbjct 81829 GGTATTTTACAAGTTAGTGC 81848 >seq28 Length=318753 Score = 152 bits (168), Expect = 3e-31 Identities = 276/398 (69%), Gaps = 18/398 (5%) Strand=Plus/Minus Query 475790 GTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT 475849 || || ||||| |||||||||||| ||||||||| | ||||| | | |||| ||| Sbjct 271385 GTTAACCCTGACGAAGCTGTTGCAATGGGAGCTGCTATACAAGCTGGTGTTTTGA-AGG- 271328 Query 475850 CAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGT 475909 |||||| | || || || | | | ||||| || || | || |||||| Sbjct 271327 ---------GAGAAA-TCAAGGATCTTTTGTTACTCGACGTTACACCCTTATCTTTAGGT 271278 Query 475910 CTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTAT-CCCATG 475968 ||||||| | || || || | ||| | ||| |||||||||| | || |||| Sbjct 271277 ATTGAAACTTTGGGTGGAGTTTTTACTCGATTAATTAACAGAAATACCACAATACCCACT 271218 Query 475969 CAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAAT 476028 |||| | | || ||||| |||||| | | || |||||||| || || || | Sbjct 271217 AAAAAGAGCCAA-GTATTCTCCACTGCTGCAGACAATCAAACTCAAGTTGGAATTAAAGT 271159 Query 476029 CTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTT--AATCTT 476086 || |||| |||||| |||| || |||||||| |||||| ||| ||| | Sbjct 271158 TTTCCAAGGAGAAAGAGAATTTGCTGCTGATAATAAGTTGCTTGGACAATTTGAAATGAT 271099 Query 476087 GAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGAT 476146 | || |||||||| || |||||||| ||||||||||||||||| || |||||||||||| Sbjct 271098 G--GGAATTCCTCCAGCACCCAGAGGGGTTCCTCAAATTGAAGTCACCTTTGATATTGAT 271041 Query 476147 GCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATC 476184 |||||||| ||| | |||||| ||| |||||| || Sbjct 271040 GCAAATGGAATTATGAATGTTGGTGCAATTGATAAGTC 271003 Score = 123 bits (136), Expect = 2e-22 Identities = 140/185 (76%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 474681 TTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGG-ACAAGAAGTAACTGATGCA 474739 |||| | ||||||||| |||| || | |||||||| | ||| |||| |||| Sbjct 272107 TTTTGGAAAAAATGAAAGAAACTGCCGAAACTTATCTTGGTAGAAGT-GTAAAGCATGCT 272049 Query 474740 GTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGA 474799 || |||||||| ||||| || |||||||||||||| |||||||||||||| ||||| || Sbjct 272048 GTTATTACTGTGCCAGCTTACTTTAATGATTCTCAGCGTCAAGCAACTAAGGATGCTGGC 271989 Query 474800 AGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCT 474859 || ||||| | ||||| | | || |||||||| ||||||||||| || ||||| Sbjct 271988 TCTATAGCAGGCTTAAATGTAACAAGAATCATTAATGAGCCAACAGCAGCAGCTCTTGCA 271929 Query 474860 TATGG 474864 || || Sbjct 271928 TACGG 271924 >seq42 Length=592675 Score = 150 bits (166), Expect = 1e-30 Identities = 133/166 (80%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 817098 TAGATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAA 817157 ||||||| ||||| ||||||||||| || ||||||||| | |||||||| |||||||||| Sbjct 262810 TAGATTTCTCATCACCAAATATTGCCAAAGAAATGCATGTGGGACACTTAAGATCTACAA 262751 Query 817158 TAATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACAAAGAATAA 817217 | |||||||| | | |||||| ||||| || |||| ||||||| |||| | | Sbjct 262750 TCATTGGTGATACAACATCTAGAATTCTTGAATATTTAGGATTTGAAGTATTAAGAGTTA 262691 Query 817218 ATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCATA 817263 ||||| |||| |||||||| || |||||||||||| | |||| ||| Sbjct 262690 ATCATGTTGGAGATTGGGGTACTCAATTTGGTATGCTTATTGAATA 262645 Score = 120 bits (132), Expect = 2e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 480572 AAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTT 480631 ||||| ||| | ||| || || ||||||| |||||||| ||| || | ||| || Sbjct 88962 AAGTGGACTCTTTTTG--AATGTTGTAATCAGAGAGAGTTCTACCATCCTCTAATTGTTT 88905 Query 480632 TCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTG 480691 ||| ||||| || | ||||||||||||||| || ||||||||||| || ||||||||| Sbjct 88904 TCCTGCAAAGATCAAACGTTGTTGATCAGGTGGGATTCCTTCCTTATCCTGAATCTTTGC 88845 Query 480692 TTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751 || ||| ||||| ||||| | || | ||| | || ||||| || || || | Sbjct 88844 CTTAACATTCTCAATTGTATCTGAAGGTTCAACTTCCAAAGTGATAGTCTTTCCTGTCAA 88785 Query 480752 AGTCTTAACGAAAATTTG 480769 ||||||||||||||| || Sbjct 88784 AGTCTTAACGAAAATCTG 88767 Score = 116 bits (128), Expect = 2e-20 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 480572 AAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTT 480631 ||||| ||| | ||| || || ||||||| |||||||| ||| || | ||| || Sbjct 88506 AAGTGGACTCTTTTTG--AATGTTGTAATCAGAGAGAGTTCTACCATCCTCTAATTGTTT 88449 Query 480632 TCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTG 480691 ||| ||||| || | ||||||||||||||| || ||||||||||| || ||||||||| Sbjct 88448 TCCTGCAAAGATCAAACGTTGTTGATCAGGTGGGATTCCTTCCTTATCCTGAATCTTTGC 88389 Query 480692 TTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751 || ||| ||||| ||||| | || | ||| | || ||||| || || || | Sbjct 88388 CTTAACATTCTCAATTGTATCTGAAGGTTCAACTTCCAAAGTGATAGTCTTTCCTGTCAA 88329 Query 480752 AGTCTTAACGAAAATTTG 480769 ||||||||| ||||| || Sbjct 88328 AGTCTTAACAAAAATCTG 88311 Score = 105 bits (116), Expect = 4e-17 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || || |||| |||||||| ||| || | ||| ||||| ||||| || | ||||||| Sbjct 88714 TTGTAGTCAGAGAGAGTTCTACCATCCTCTAATTGTTTTCCTGCAAAGATCAAACGTTGT 88655 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 |||||||| || ||||| ||||| |||||||||||| || ||| ||||| ||||| Sbjct 88654 TGATCAGGTGGGATTCCCTCCTTATCTTGAATCTTTGCCTTAACATTCTCAATTGTATCT 88595 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || | ||| | || ||||| || || || | |||||| || ||||| || Sbjct 88594 GAAGGTTCAACTTCCAAAGTGATAGTCTTTCCTGTCAAAGTCTTGACAAAAATCTG 88539 >seq36 Length=268453 Score = 141 bits (156), Expect = 6e-28 Identities = 340/506 (67%), Gaps = 19/506 (4%) Strand=Plus/Plus Query 355249 CCAGTGCCAATACCTTCTGTTCCATTAACTAAAATCATTGGAATTACAGGTACATAAAAT 355308 || || ||||| || || || ||||| || |||||||||||||||| || |||||| || Sbjct 54565 CCTGTACCAATTCCATCAGTACCATTTACCAAAATCATTGGAATTATTGGAACATAATAT 54624 Query 355309 ACTGGTTCAATCATTTTATTATCTTCAAATTGAT--GTTGCAATACATCAAAATCATGTT 355366 | |||||||| || ||| ||| || || ||| |||| | | |||| | Sbjct 54625 AAAGGTTCAATTTGTTGTCCATCATCATATAAATAAGTT--AATAAAGGATCATCAGCCT 54682 Query 355367 GTATGAAAATATATTTAGTTAATTGATTGAGTTGTGTGAAGATATATCG---TGCACTTG 355423 | |||||||||| |||| ||| | || | || || ||||| || ||||||| Sbjct 54683 CTGGGAAAATATATCTAGTCCATTTAGATAGCTTAGTAAATATATAACGAGCAGCACTTG 54742 Query 355424 CATTATCTTTGCCTCCACTTAATCTTGTACCAAATTGACCATTGGGAAGTAATAAATTTA 355483 | |||||| || || | ||| |||||||||||||| || ||| | ||||| Sbjct 54743 C---ATCTTTTCCACCTTCTTTTCTACTACCAAATTGACCACATGGTTCTAACAGATTTA 54799 Query 355484 TGTTGTTACTTCCAACATAATTTTGTGCCATTTTTATTATAGT-TTCAGTCATTGACTGT 355542 || |||||||||||| ||||||| ||||| || | ||||| | || | ||| | Sbjct 54800 GATTATTACTTCCAACAAAATTTTGAGCCATATTAACAATAGTACTTTGT-AATGATGAT 54858 Query 355543 TCTCCATGATGATATTTAGTTCTTTTCGAAACTGCACCTTGTAATTCAGATACTTTAATT 355602 |||||||||||||| | | || | ||| ||| ||||| | ||||||| Sbjct 54859 TCTCCATGATGATAAGCACTATGTTCAGCAACATAACCAGCTAATTGTGCAACTTTAA-- 54916 Query 355603 TCTTCTTTATAAATACCTTCTTCCTCTGAACCATACAATACTTTTCTTTGAGATGGTTTA 355662 ||| |||| || || || || || | | |||||||||||| ||||| Sbjct 54917 -GTTCATTATTAAGCTTTTTTTTAAATGTTGCAAAAAGTACTTTTCTTTGTCCAGGTTTT 54975 Query 355663 AGACCGTCAGCTATGTTAGGTATTGATCTCATATTATC--ATCGACTGAAAATGAAATAA 355720 | ||| || || || || || ||||| || |||| ||| ||| |||| | | || Sbjct 54976 AAACCATCTAATAAATTTGGAATAGATCTAGTAGTATCATATCTACT--AAATAATACAA 55033 Query 355721 GTTCGCGATGAATAAAATCATAATAT 355746 |||| ||||||||||||| ||||| Sbjct 55034 GTTCTTTATGAATAAAATCAAAATAT 55059 >seq24 Length=225370 Score = 132 bits (146), Expect = 3e-25 Identities = 280/404 (69%), Gaps = 24/404 (6%) Strand=Plus/Plus Query 269113 CTCGTTAACAATTGTGTCGG-TCCACGCGCTCTAGAGTGAGTTTTATCGCCCACCATTTG 269171 || |||| || ||||| | | ||| | ||||||| ||| |||||||| | ||||| || Sbjct 148356 CTGGTTAGCA-TTGTGACTGCTCCTCTAGCTCTAGCATGAATTTTATCGTCAACCATATG 148414 Query 269172 TTTTAAACGCTGATAATATGTCGGACCAATAAATATTTT-GACATGCATTTTTTCTCCCG 269230 ||||| | |||||| || || || |||||||| ||| | ||| | || | | | ||||| Sbjct 148415 TTTTAGTCTCTGATAGTAAGTTGGCCCAATAAAGATTCTCGAC-TCCAATCTCTTTCCCG 148473 Query 269231 TCATACCATTTGTCATTGTTTCATTTCCCCATGCTTC--ATATCCG----TATG-AAACT 269283 | ||||| |||| ||||||||| || ||| | | ||| |||| |||| Sbjct 148474 TATGGCCATTGTACATTACTTCATTTCC--ATTTTTCTGAAACCCGGAACTATGTAAACG 148531 Query 269284 AGTTCATCATTTATTTTATTAATATCTACACCTGTAAATGGTGTCGCATCACCATATACT 269343 | || || | || | | || | | ||||| || || ||||| || | | | Sbjct 148532 GCTAGAT-ATCTCTTCAACTGTAATTTTC----GTAAAAGGAGTTGCATCGCCCTCCAAT 148586 Query 269344 CCTTTAATAGCACATACTTTTCCTAATAGACATTCAATCAATTGTCCAATGGTCATACGT 269403 |||| ||| || || |||| || | |||||||||||| || || ||||| |||||||| Sbjct 148587 CCTTGAATTGCGCACGCTTTGCCAAGTAGACATTCAATTAAATGGCCAATTGTCATACGC 148646 Query 269404 TTTGGCATACAATTAGGATTAATAATAATATCTGGCACAAGTCCAGATTTAGTAAATGGC 269463 || ||| || |||||| |||||||| ||||| | || ||| || ||||||||| Sbjct 148647 GAAGGAATAGCATGAGGATTCATAATAATGTCTGGAATAATCCCATCTTGTGTAAATGGC 148706 Query 269464 ATATCTGCTC---TATGAATTTTAAATCCAACTGTACCTTTTTG 269504 ||||| ||| | || || ||| | || | |||||| ||||| Sbjct 148707 ATATC--CTCAGTTCTGTATGTTATA-CCGATTGTACCCTTTTG 148747 >seq10 Length=470636 Score = 122 bits (134), Expect = 6e-22 Identities = 133/177 (75%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 480593 ATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTG 480652 ||| || |||| ||||||||| |||||| | ||||||||||||||| || ||||| || Sbjct 335796 ATTGTAGTCAGATAGAGTTCTACCATCTTCCAATTGCTTTCCAGCAAAGATCAGACGCTG 335855 Query 480653 TTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 ||||||||||||||| || ||||| || || |||||| || ||| ||||||||||| Sbjct 335856 TTGATCAGGAGGAATGCCCTCCTTATCCTGGATCTTTGCCTTTACATTCTCAATAGTATC 335915 Query 480713 AGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || | ||| | || || || || || || | ||| || || |||||||| Sbjct 335916 GGAAGGTTCAACTTCCAATGTGATGGTCTTTCCTGTTAAAGTTTTGACAAAAATTTG 335972 >seq27 Length=1279890 Score = 105 bits (116), Expect = 4e-17 Identities = 327/501 (65%), Gaps = 24/501 (5%) Strand=Plus/Minus Query 894849 TTATAATGGTTTTGAACCAAGTGGTAGAATACATATTGCACAAGC---ATTAATAAC-AG 894904 |||| |||| |||||||| || ||||| |||||||| ||| ||||| || | Sbjct 684004 TTATGATGGATTTGAACCTTCAGGAAGAATGCATATTGCTCAATGTATATTAAAGACTAT 683945 Query 894905 TAATGAATACAAATGAAATTATTTCTTGTGGAGGAAGGATGATAATTTATATTGCTGATT 894964 ||||| | | || | || | | | ||||| | | || | || | || |||| Sbjct 683944 TAATGTAAATAAGTTAACTGAAT----GTGGATGCGTTTTTGTATTCTACGTAGCAGATT 683889 Query 894965 TATTTGCAAAAATGAATaaaaaaaTGGATTCTGATCTTGATAAAATAAAAGATGTAGGTT 895024 ||||| | | ||||| || |||| ||||||||| ||||| || ||| ||| Sbjct 683888 GGTTTGCTCTACTCAATAATAAGATGGGCGGTGATCTTGAAAAAATCAAGATTGTTGGTG 683829 Query 895025 TATATTTCATTGAAGTTTTTAAAGCATGTGGTATTAATATGTCTGAAACAAAGTTTATTT 895084 ||||||| || | | | || || || || ||||| | | || ||| ||| Sbjct 683828 AATATTTCGTTCACATATGGAAGGCTGCAGGAATGGATATGACAAATGTAAGATTTGTTT 683769 Query 895085 GGTCAAGTGATTTATTTAATA---AAAATCCTGAAAAATATTTTACAAGATTGTTAGATA 895141 || || |||||| ||||| || || || | | |||| |||| | || |||| Sbjct 683768 GGGCATCTGATTTTATTAATGGGGAAGATTCTAATGAGTATTGGTTAAGAGTTTTTGATA 683709 Query 895142 TTTCCGAAGAAACCTCTC--TTTCCAGGAGTAAAAGATGTTGTCAAATTATGGGTCGAAA 895199 |||| ||||| | || | || | |||||||||||| ||||||||||| || | Sbjct 683708 TTTCT--AGAAAGTTTAACATTACTAGAATTAAAAGATGTTGCCAAATTATGGGAAGACA 683651 Query 895200 AGACGGAGATGAATTATCTGTTTCTCAAATTATTTATCCTTGCATGCAAGTTGCAGATAT 895259 ||| |||||| | | | || | | ||||||| ||||||||| || ||||| Sbjct 683650 AGAAAATGATGAACAACCATGTGCTTCAGTATTTTATCCATGCATGCAATGCGCTGATAT 683591 Query 895260 TTTTGAACTCGAACCTGAAGGAATAGATATTTGTCAATTAGGTGTTGATCAACGTAAAGT 895319 || ||||| |||| ||||||||| || |||||| | |||||| | ||||| Sbjct 683590 ATTCCAACTC-------AAGG--CAGATATTTGCCAGTTAGGTATGGATCAAAGAAAAGT 683540 Query 895320 TAATATGCTCGCTCTCGAATA 895340 ||| ||||| ||| ||||| Sbjct 683539 TAACATGCTTGCTAGAGAATA 683519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268176926572844