Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001483535.1_202015-12- 30] 906 sequences; 8,691,536 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq135 271 3e-67 seq12 181 4e-40 seq32 156 2e-32 seq49 150 7e-31 seq221 145 3e-29 seq510 116 1e-20 seq10 111 6e-19 seq39 109 2e-18 seq368 104 9e-17 seq81 87.8 7e-12 seq6 87.8 7e-12 >seq135 Length=20071 Score = 271 bits (300), Expect = 3e-67 Identities = 496/715 (69%), Gaps = 16/715 (2%) Strand=Plus/Plus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 ||| ||||| |||||| | || ||||| | |||||||| ||||| | ||| | | Sbjct 1573 AGCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAACGATAC 1632 Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTAC 451032 |||||| ||| | |||| || ||||| || || || || |||| ||| ||||| Sbjct 1633 TGTAGATATTGTTCCAAACGATCAAGGTAACCGTACAACACCATCATATGTAGCATTTAC 1692 Query 451033 GGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAA 451090 || | || | ||| | || | || || || ||||| || | |||| | || Sbjct 1693 TGAAACTGAGCGTCTTATTGGTGATGCAGCAAAGAATCAA--GTTGCTAGAAATCCAGAA 1750 Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150 |||||||| | ||||||||||||| | ||||| | | || ||||||| | | |||||| Sbjct 1751 AACACAGTTTTTGATGCTAAACGTCTTATTGGTAGAAAGTTTGATGATCAGGCAGTACAA 1810 Query 451151 AAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAA---TCAAAAAGGAAAGCCCTATATT 451207 | || | | || | | | | ||||| | || ||| | ||||| || | Sbjct 1811 AGTGATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGATAAGCCA-ATCAT 1869 Query 451208 CAA-GTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGT 451266 || ||||| || |||||||| || || | ||||||||||||| ||||||| Sbjct 1870 CAGTGTAAACTACTTAGGTGAAAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGT 1929 Query 451267 TCTTACTAAA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCC-AGTTACTGATGCA 451324 | |||| ||| ||||| |||| | ||| ||| |||| || || | ||| |||| Sbjct 1930 T-TTACAAAAGATGAAGGAAATCTCTGAAGCATA-CTTGGGTCGCCAAATTAAGAATGCT 1987 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 ||| |||||||||| |||||||||||||| ||||||| |||||||| || |||||||| Sbjct 1988 GTAGTTACTGTTCCAGCTTATTTCAATGACTCACAACGTCAAGCAACAAAGGATGCAGGT 2047 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 ||||||||||| ||||| | |||| ||||| || || || ||||||||| | || Sbjct 2048 GCAATTGCTGGTTTGAATGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTGCT 2107 Query 451445 TATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGT 451504 ||||| || | || |||| ||| | || | |||| | || | || ||||| ||| Sbjct 2108 TATGGTCTTGATAA---GAAAGGAACTGGCGAGAGAAATGTATTGATCTTCGATTTAGGT 2164 Query 451505 GGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCA 451564 || || ||| |||| || || | | ||||||||||| | |||||||| || || Sbjct 2165 GGTGGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTTAAAGCT 2224 Query 451565 ACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGAAT 451619 ||| |||||||||||| | || ||||||||| ||||||| | | ||||||| Sbjct 2225 ACCGCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAACAGACTCGTGGAAT 2279 >seq12 Length=82658 Score = 181 bits (200), Expect = 4e-40 Identities = 458/690 (66%), Gaps = 15/690 (2%) Strand=Plus/Plus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 ||||| || ||| | || || || | ||||||||| ||| | ||| | ||||| | ||| Sbjct 72120 ATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAGAGTA 72179 Query 450977 GAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGAT 451036 || ||||| ||||||| ||||| || | ||| || |||| ||| || || ||| Sbjct 72180 GAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCACTGAT 72239 Query 451037 TCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAAAACA 451094 || ||| | | || || | || || ||||| | || |||| | | | | Sbjct 72240 GATGAGAGATTGATTGGTGAATCAGCCAAGAATCAA-GCTACTATCAA-TCCAGTTCAGA 72297 Query 451095 CAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAG 451154 | | | || | || | | ||||| ||| | | | |||||| |||| ||||| | Sbjct 72298 CTTTGTTCGACGTAAAGAGACTTATTGGTCGTCGTTTTAAGGATGATTCTGTCCAAAAGG 72357 Query 451155 AGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTAA 451214 | || | || || | ||||| | | || || | | ||||| || || ||||| Sbjct 72358 ATAAGACTTTGTTACCATATGAGATTATTAACAAAGATAGCAAGCCTTACATACAAGTTT 72417 Query 451215 ATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTA 451274 | ||| ||||| | || || || || ||||| |||| ||||||| ||| || Sbjct 72418 CTGTTAAGGGTGAGAAGAAGCAATTAGCCCCAGAAGAGGTTTCCGCTATGGT-CTTGCTC 72476 Query 451275 AA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 || |||||||||| || || ||| | ||| ||| | |||||||||||||| Sbjct 72477 AAGATGAAAGAAATTGCTGAGGCTTATCTCGGTAAGGAAGTAAAGCATGCAGTAATTACT 72536 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || || ||||| || |||||||| || || || || || || ||||| || ||||||| Sbjct 72537 GTCCCAGCTTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGTGCTATTGCT 72596 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTA 451453 ||||| ||||| | || ||||||||||| || |||||||| || | || | ||| | Sbjct 72597 GGTTTGAATGTAATCCGTATTATTAATGAGCCAACAGCAGCAGCAATTGCTTTTGGTTTG 72656 Query 451454 GGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACT 451513 | | ||||| || || || | |||||||||| ||||| ||||| || ||| Sbjct 72657 G-------ATAAGAA--AGCTGAGAAGAGCATTTTAGTATACGATTTGGGTGGTGGTACT 72707 Query 451514 CATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGT 451573 |||| |||| | | | ||||| | || || || || || || || | |||| Sbjct 72708 TTTGATGTTTCTCTCTTGACCATTGATAACGGCGTTTTCGAGGTCGTTGCTACAAGTGGT 72767 Query 451574 GATACTCATCTAGGAGGTGAAGATATTGAT 451603 ||||| ||| | |||||||| ||| | ||| Sbjct 72768 GATACCCATTTGGGAGGTGAGGATTTCGAT 72797 Score = 116 bits (128), Expect = 1e-20 Identities = 350/536 (65%), Gaps = 27/536 (5%) Strand=Plus/Plus Query 451895 GATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTT---- 451950 ||||| || || | ||||| |||||||| || || ||||| ||||||| || | Sbjct 73089 GATGAGATCGTTTTGGTAGGTGGTTCTACTCGTATCCCTAAGATTCAAGCCTTGATCAAG 73148 Query 451951 GTCTTCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAAT---CCTGATGAAGCTGT 452007 | ||||| || ||||| | | | || || | || | || |||||||| || Sbjct 73149 GAGTTCTT----TGATGGAAAGGAGCCA---AACAGAGGAATTAACCCAGATGAAGCCGT 73201 Query 452008 TGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGATGAAAAATTAGG 452067 || ||||||||||| || ||||| | ||| || ||||| || || | | | Sbjct 73202 CGCTTATGGTGCTGCCGTACAAGCTGGTATCTTAGCAGGTGAAG--GAGGTA-------G 73252 Query 452068 AGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAAT 452127 ||| | | ||| | ||||| || ||| || || | || |||| || | ||||||| | Sbjct 73253 TGATTTATTATTATTGGATGTTACTCCTTTAACTTTAGGTATTGAGACTGTTGGTGGAGT 73312 Query 452128 GATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAG 452187 ||||| || | ||| || ||| | |||| || ||||| ||| || || Sbjct 73313 TATGACAAAGCTCATTGGTAGAAACACTGTTGTTCCAACCAAGAAGAGCCAAGTTTTCAG 73372 Query 452188 TAC--AGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCA 452245 ||| | ||| ||||| || |||| |||| ||| || || | ||| || || ||| || Sbjct 73373 TACTTACCAA--GATAATCAGCCAGCTGTACTTATCCAGGTTTATGAGGGTGAGCGTCCA 73430 Query 452246 ATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCA 452305 ||||| ||||| || || ||| |||| ||||| || || || ||| Sbjct 73431 ATGACTAAGGATAACAACCTCCTCGGAAAATTCGAGCTTTCTGGAATCCCACCAGCTCCA 73490 Query 452306 AGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTG 452365 || || ||| |||||||| |||| | ||| ||||| | |||||||| | | || Sbjct 73491 AGAGGTGTTCCCCAAATTGAGGTTACTTTTGAAATTGATACTGATGGTATTTTACAAGTT 73550 Query 452366 AGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAA 452421 |||||| || || |||| ||||| || || ||||| || || |||||||| Sbjct 73551 AGTGCAAAGGATAAGGGTACTGGTAAATCCGAGAAGATTACTATCACAAATGATAA 73606 >seq32 Length=52757 Score = 156 bits (172), Expect = 2e-32 Identities = 169/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||||||||| || |||| || || ||||| ||| | || |||||| | || Sbjct 14012 ATGCAGATTTTCGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTCA 14071 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | |||| ||| ||||| |||||||||||||| || ||||||||| Sbjct 14072 GATACAATTGAGAATGTTAAGGCAAAGATTCAGGATAAGGAAGGAATCCCACCTGATCAA 14131 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || |||| |||||| | || ||||| |||||| | | ||||| || Sbjct 14132 CAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAAC 14191 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || | |||||||| || ||||| ||||| Sbjct 14192 ATTCAAAAAGAGTCCACTTTACACTTAGTCTTGAGACTTAGAGG 14235 Score = 152 bits (168), Expect = 2e-31 Identities = 168/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| ||||| || |||| || || ||||| ||| | || |||||| | || Sbjct 13556 ATGCAGATTTTTGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTCA 13615 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | |||| ||| ||||| |||||||||||||| || ||||||||| Sbjct 13616 GATACAATTGAGAATGTTAAGGCAAAGATTCAGGATAAGGAAGGAATCCCACCTGATCAA 13675 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || |||| |||||| | || ||||| |||||| | | ||||| || Sbjct 13676 CAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAAC 13735 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || | |||||||| || ||||| ||||| Sbjct 13736 ATTCAAAAAGAGTCCACTTTACACTTAGTCTTGAGACTTAGAGG 13779 Score = 138 bits (152), Expect = 4e-27 Identities = 165/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || || || |||| || || ||||| ||| | || |||||| | || Sbjct 13784 ATGCAGATTTTTGTCAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTCA 13843 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | |||| ||| |||||||||||||| ||||| || ||||||||| Sbjct 13844 GATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAGGGAATCCCACCTGATCAA 13903 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || |||| |||||| | || ||||| |||||| | | || || || Sbjct 13904 CAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGACTACAAC 13963 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || | || |||||||| || || ||||| Sbjct 13964 ATTCAAAAAGAGTCTACTTTACATTTAGTATTGAGGCTCAGAGG 14007 >seq49 Length=42749 Score = 150 bits (166), Expect = 7e-31 Identities = 231/329 (70%), Gaps = 9/329 (3%) Strand=Plus/Minus Query 451274 AAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 |||||||||||||| || ||| ||| ||||| || | |||| || |||||| Sbjct 37047 AAAATGAAAGAAACTGCCGAAACTTATCTTGGTAGAAGTGTAAAGCATGCTGTTATTACT 36988 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || || ||||| || |||||| | || || ||||||||||| ||||| || ||| || Sbjct 36987 GTGCCAGCTTACTTTAATGATTCTCAGCGTCAAGCAACTAAGGATGCTGGCTCTATAGCA 36928 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTA 451453 || |||||||| |||| |||||||| || |||||||| ||||| ||||| ||| | Sbjct 36927 GGCTTAAATGTAACAAGAATCATTAATGAGCCAACAGCAGCAGCTCTTGCATACGGAAT- 36869 Query 451454 GGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACT 451513 ||||| || |||| | |||| || ||| | |||||| || ||||| ||| Sbjct 36868 GGAAA--------AAGCAGATGGCAAAACAATCGCAGTTTATGATTTGGGAGGAGGTACT 36817 Query 451514 CATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGT 451573 |||| |||| | | ||| | || || |||||||| || ||||| |||||| Sbjct 36816 TTCGATATTTCTATTTTAGAGATTCTTGGCGGAGTGTTTGAAGTTAAAGCAACTAATGGT 36757 Query 451574 GATACTCATCTAGGAGGTGAAGATATTGA 451602 | ||| |||||||| ||||| |||| Sbjct 36756 AACACTTCCCTAGGAGGAGAAGACTTTGA 36728 Score = 95.1 bits (104), Expect = 5e-14 Identities = 269/409 (66%), Gaps = 22/409 (5%) Strand=Plus/Minus Query 451988 GTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGT 452047 || || ||||| |||||||||||| || ||||| | ||||| | | || | | ||| Sbjct 36333 GTTAACCCTGACGAAGCTGTTGCAATGGGAGCTGCTATACAAGCTGGTGTTTTGA-AGG- 36276 Query 452048 TCAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGA 452107 || |||| | | ||| || ||||| | || || ||||| ||||| | || Sbjct 36275 ---------GAGAAATCAAG-GATCTTTTGTTACTCGACGTTACACCCTTATCTTTAGGT 36226 Query 452108 GTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGT 452167 ||||||| |||||| | | ||| |||||||| || || | || || | Sbjct 36225 ATTGAAACTTTGGGTGGAGTTTTTACTCGATTAATTAACAGAAATACCACAATACCCACT 36166 Query 452168 AAAAAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACC---AGGTGTAACTATTCAA 452224 |||||||| ||| ||| || || || || ||| | || || || || || Sbjct 36165 AAAAAGAGCCAAGTATTCTCCACTGCTGCAGACAATCAAACTCAAGTTGGAATTA---AA 36109 Query 452225 GTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTT--ACTC 452282 || || |||||||| | | | | | |||||||| || ||| ||||| | | Sbjct 36108 GTTTTCCAAGGAGAAAGAGAATTTGCTGCTGATAATAAGTTGCTTGGACAATTTGAAATG 36049 Query 452283 TTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTG 452342 | || ||||||| || || || ||||||||||||| | |||| |||| ||| Sbjct 36048 ATGGGAA--TTCCTCCAGCACCCAGAGGGGTTCCTCAAATTGAAGTCACCTTTGATATTG 35991 Query 452343 ATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAA 452391 |||||||||| ||| | ||||| ||||| |||| || ||| ||||||| Sbjct 35990 ATGCAAATGGAATTATGAATGTTGGTGCAATTGATAAGTCAACTGGAAA 35942 >seq221 Length=9066 Score = 145 bits (160), Expect = 3e-29 Identities = 299/443 (67%), Gaps = 10/443 (2%) Strand=Plus/Plus Query 364565 TATTCCATCTTTAGTTGATGGATTTAAACCTTCTCAAAGAAAAATTTTTTATGGAGCAAA 364624 ||||||| |||| | ||||| || |||||| ||||||||| | ||| || | || Sbjct 1643 TATTCCAAATTTATTAGATGGTTTAAAACCTGGACAAAGAAAAGTACTTTTTGCAACATT 1702 Query 364625 TTTAAGAGGATTAGAAAAAGATCAAGTAAAAGTAGCTCAATTAGCAGGTTTTGTATCTGA 364684 | || | | ||| || | || | ||||| || |||||||| |||| ||| |||| Sbjct 1703 TAAAAAAAGCTTAATAA----TGAACTTAAAGTTGCACAATTAGCTGGTTATGTTGCTGA 1758 Query 364685 CCGGGTAGCTTATCATCACGGTGAGGCAAGTTTAATGGGAGCAATAATTGGAATGGCACA 364744 | ||||||||||| || || || ||| | | || || ||||| || Sbjct 1759 ACATAGTGCTTATCATCATGGAGAATCATCATTACAAAGTACTATTGTTAATATGGCTCA 1818 Query 364745 AAATTTTGTTGGAAGTAATAATGTAAATTTACTAGAACCAAAAGGACAATTTGGAAGTCG 364804 |||||||||||||||||||||| ||||| | |||||||| || |||||||| ||| | Sbjct 1819 AAATTTTGTTGGAAGTAATAATCTAAATCTGTTAGAACCATGTGGTCAATTTGGTAGTAG 1878 Query 364805 AGTAATGGGAGGTAAAGATTC---TGCCAGCCCACGTTATATTTGGACCAAACTTGAAAA 364861 | | || || |||||| | ||| | |||||||| | || || || || Sbjct 1879 AAAAGAAGGTGGAAAAGATGCAAGTGC---TGCTCGTTATATATTTACTAAGCTATCTAA 1935 Query 364862 AGTGGCAGGATTAATATTTAGAAAAGAAGATAATCCAATTTTAAATTATATTAATGATGA 364921 | | | ||| || || | | | ||| |||| | |||| |||| | ||||||| Sbjct 1936 ATGGACTAGATATATTTTCCCAGAGGCTGATGATCCTTTATTAACTTATTTATATGATGA 1995 Query 364922 TGGATTAATGGTTGAACCTGAATTTTATCTTCCTATTATTCCTATGATTTTAGTAAATGG 364981 |||| | |||||||| || |||| |||| || ||||| |||||||| |||||||| Sbjct 1996 TGGACAACAAATTGAACCTTTATATTATGTTCCAATAATTCCAATGATTTTGGTAAATGG 2055 Query 364982 AGCAACAGGCATTGGTACTGGTT 365004 | || |||||||| |||| Sbjct 2056 TACTGATGGAATTGGTACAGGTT 2078 Score = 138 bits (152), Expect = 4e-27 Identities = 401/596 (67%), Gaps = 40/596 (7%) Strand=Plus/Plus Query 363744 GGAATTCCTAAACTAGAAGATGCTAATAAAGCAGGAACAAAAGATGCTCATAAATGTGGA 363803 ||||| || ||||| |||||||| || |||| || | || | | |||||| Sbjct 834 GGAATCCCAAAACTTGAAGATGCAAACGAAGCTGGTGGACCCCATTCCAAAAAATGTACT 893 Query 363804 -TTATATTTAGCAGAGGGAGATTCTGCTCT---TTCTATGATTCTGTCAGGGTTATCAAG 363859 ||||| ||| | || || ||||||||| |||| || ||| |||| ||||| | Sbjct 894 CTTATACTTA-CTGAAGGTGATTCTGCTAAAACTTCT-TG--TCTTGCAGGATTATCTAT 949 Query 363860 TAAAGATAGAAATTTTTATGGTGCCTTTCCGTTAAAAGGAAAATTATTAAATGTAAGAGA 363919 | | |||| | | || ||| | ||||| || || ||| | |||||||| ||||| Sbjct 950 TGTTGGTAGAGACTATTTTGGAGTATTTCCACTACGTGGTAAACTTTTAAATGTTAGAGA 1009 Query 363920 AGCATCAGTTAAACAAATTATGGGAAATGATGAGATATCAAACCTTaaaaaaaTTTTAGG 363979 ||| ||| |||||||| || || |||| ||| ||| ||| || ||||| || || Sbjct 1010 AGCTTCATTTAAACAACAAATTGGTAATGTTGAAATACAAAATATTCTTAAAATATTGGG 1069 Query 363980 ATTACGTAATGAATTTAAATATGAAATGGATGAAGAATTTAATACTTTAAGATATGGAAA 364039 |||| ||| || | |||||||| | ||| | | | ||| ||||||||||| Sbjct 1070 ATTAGGTATTGGACAAAAATATGATA---ATGGACCAGTCAAT---TTAAGATATGGTTC 1123 Query 364040 AGTAATAATTTTATGTGATTCAGATGTAGATGGAAGTCATATTAAGGGACTAATTTTAAA 364099 |||| | | |||| |||| ||||| ||||||||||| ||||| ||| | || Sbjct 1124 TTTAATGCTAATGACTGATCAAGATCATGATGGTAGTCATATTAAAGGACTCATTATTAA 1183 Query 364100 TATGTTTCA-TAGTATGTGGCCTAATCT-TTTAAAAAGAGAAGGTT-TTATTACAACTAT 364156 | | | || || ||| ||||| | | | || | ||| | || ||| |||| | | Sbjct 1184 TTTAATACATTATTAT-TGGCCAAGTTTAATTCATTTTAGAGGATTCTTAAAACAA-TTT 1241 Query 364157 GAACACTCCAATTGTTAAAGCAACAAAAGGA---AAAGAAATATTAAAATTTTATAATTT 364213 | | ||||| ||||||||||| | ||||||| || ||||| | ||| | || ||| Sbjct 1242 GTA-ACTCCTATTGTTAAAGCTAAAAAAGGATCTAATGAAATTT---CATTCTTTACTTT 1297 Query 364214 AACTGATTATGATAATTGGAGAAATGATAAT------AATACAAAAGGATATTATATT-A 364266 | ||| ||||| | |||||||| ||||| || ||| |||| | ||| | Sbjct 1298 ATATGAATATGAACAATGGAGAAAGAATAATTCATCAAACTTAAATGGAT-GGAGATTCA 1356 Query 364267 AATATTACAAAGGATTAGGAACATCT---GATTCTAAAGAAGCTAAAGAATAtttt 364319 | ||||| ||||| ||||| |||||| || ||| ||| ||||||||||||| Sbjct 1357 AGTATTATAAAGGTTTAGGTACATCTACAGA-TCT--TGAATTTAAAGAATATTTT 1409 >seq510 Length=2011 Score = 116 bits (128), Expect = 1e-20 Identities = 160/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || ||||| | || || || || || || | || |||||| | || Sbjct 1610 ATGCAAATTTTTGTCAAAACTTTAACAGGAAAGACCATCACATTGGAAGTTGAACCTTCC 1551 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | | || ||| || || |||||||| || ||||||||||||||| Sbjct 1550 GATACTATTGAGAATGTAAAGGCAAAGATCCAGGATAAGGAGGGCATTCCTCCTGATCAA 1491 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || || ||| | |||||||| |||||| | | || || ||| Sbjct 1490 CAGCGTCTGATCTTTGCTGGAAAGCAATTGGAAGATGGTAGAACTCTATCTGACTACAAT 1431 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || | || |||||||| ||||| ||||| Sbjct 1430 ATCCAGAAGGAGTCCACTTTGCATTTAGTATTGAGACTTAGAGG 1387 >seq10 Length=91782 Score = 111 bits (122), Expect = 6e-19 Identities = 129/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 248791 ATTTTCATTGGTCCTATGTTTTATTTGAGACTTAAACATATGGTACTTGATAAAGTTCAT 248850 ||||| |||| ||||| | ||| | | | ||||||||||| ||||||||| | ||| Sbjct 32639 ATTTTTGTTGGGCCTATTTATTACCAAAAATTGAAACATATGGTTCTTGATAAAATGCAT 32698 Query 248851 TCCAGAAGTATGGGTCCTAGACAAGCTATTACTAGACAACCCATGGAAGGACGTTCTAAA 248910 | ||| | | ||||||||||||| | |||| |||||||||| |||||| | ||||| Sbjct 32699 GCAAGAGGAAGGGGTCCTAGACAAATTCTTACCAGACAACCCACTGAAGGAAGATCTAAG 32758 Query 248911 GATGGAGGTCTTAAAATTGGAGAGATGGAAAAAGATGCAATGGTTGCTCATGGA 248964 |||||||| || |||| || ||||||| |||| | || ||| ||||| Sbjct 32759 GATGGAGGACTACGTCTTGGTGAAATGGAAAGAGATTGTTTAGTAGCTTATGGA 32812 >seq39 Length=49085 Score = 109 bits (120), Expect = 2e-18 Identities = 129/172 (75%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 412289 TTCCAAAACGACCACTTCTACCAATTCTATGTATAAAAGTTTCATGATTTTTAGGTAAAT 412348 ||||||| | |||||||| ||||||| ||| ||| | ||| | ||| |||||| || Sbjct 3002 TTCCAAATCTGCCACTTCTTCCAATTCGATGAATATATAATTCTTTATTAATAGGTAGAT 2943 Query 412349 CATAATTTATAACTAATTTAACCTCAGGAATATCTATCCCCCGTGCTAATAAATCAGTTG 412408 | || |||| |||||| || || | | | ||| || || | | | ||||||| |||| Sbjct 2942 CGTAGTTTACAACTAAATTGACTTGTTGTACATCAATACCTCTTCCCCATAAATCTGTTG 2883 Query 412409 TTAATAAAATTCGTGTTTTTCCCTCTCTAAATTCATCTACAATTTTACTTCT 412460 | | ||||| |||||||||||| |||||||| || ||| |||| || ||||| Sbjct 2882 TAATTAAAACTCGTGTTTTTCCTTCTCTAAACTC-TCT-CAATATTTCTTCT 2833 >seq368 Length=3976 Score = 104 bits (114), Expect = 9e-17 Identities = 135/186 (73%), Gaps = 3/186 (2%) Strand=Plus/Minus Query 96115 TACTTTACTAATGTTTAATGCTGGGCTCCAGTTATTTTTTAAAATATCTAAACAAATTGC 96174 |||| | |||| |||| || || |||||| || |||||||||||| || ||||| || Sbjct 731 TACTGTTCTAAGAGTTAAAGCAGGACTCCAGGCATCTTTTAAAATATCCAAGCAAATAGC 672 Query 96175 ACCTGT---AGTACTAATATTTGGATGATAAATAGGAGTTTTAAATATAATTTTAGGAGG 96231 ||||| | || |||||| ||||| |||| || | ||| ||| ||| ||||| Sbjct 671 TCCTGTTTGACTAGAAATATTCGGATGCCAAATTCTTGTGATGAATTTAACTTTTGGAGG 612 Query 96232 CTTATATGGATAGTCTTCAGGAAAAGTAATTTCTAATTGGAATACTCCACCCTCATAGGG 96291 || |||||||| |||| || | | |||| || | ||| |||| || || ||||| || Sbjct 611 CTCGTATGGATATTCTTTTGGTACAATAATATCAAGTTGAAATATACCTCCTTCATATGG 552 Query 96292 TGTTCC 96297 |||||| Sbjct 551 TGTTCC 546 >seq81 Length=32207 Score = 87.8 bits (96), Expect = 7e-12 Identities = 168/244 (69%), Gaps = 14/244 (6%) Strand=Plus/Minus Query 420706 CCAAATGTATCAATTCCTCTTCTTCCAGCTCGTCCTGCCATTTGAAGAAATTCATCAGTT 420765 ||||| |||||||| |||||||||||||||| ||||| |||||| | ||||| | Sbjct 31894 CCAAAAGTATCAATACCTCTTCTTCCAGCTCTTCCTGACATTTGTGTATATTCAGAA--- 31838 Query 420766 CGTAAGAA-TCTTCTA------CCACAATCATCATATTTAGATAATCCAGTAAATACAAC 420818 | ||||| | ||||| | | ||||| | |||| ||| | ||||||||||| Sbjct 31837 -GAAAGAAGTATTCTATTTTTTCTTCCATCATACTTTTTA-ATA--CTAGTAAATACAAT 31782 Query 420819 AGTTTTTGTAGGCATATTTACACCAACAGAAAAAGTTTCAGTTGCTAACAAAACTTTAAT 420878 || | | | || ||| | || | ||| | || |||||||| || || ||||| || Sbjct 31781 AGATCTAGCTGGACAATTAATTCCCATAGATATTGTCTCAGTTGCAAATAATACTTTGAT 31722 Query 420879 TAAtttttttGAATAAAGAATTTCAACAATTTCTTTTAAAATAGGAATTATACCAGAATG 420938 |||| | | | | | | || ||| |||||||| | ||| |||| || ||| ||| Sbjct 31721 TAATCCTCTAGTAAATAAGATCTCAGTCATTTCTTTGATAATTGGAAGCATTCCACTATG 31662 Query 420939 ATGA 420942 |||| Sbjct 31661 ATGA 31658 >seq6 Length=121832 Score = 87.8 bits (96), Expect = 7e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 420714 ATCAATTCCTCTTCTTCCAGCTCGTCCTGCCATTTGAAGAAATTCATCAGTTCGTAAGAA 420773 ||||| ||||||||||| |||| || |||||||| || || ||| ||| || Sbjct 63202 ATCAAGGCCTCTTCTTCCTGCTCTACCACTCATTTGAATGAACTCTCCAG-AGTTAACAA 63260 Query 420774 TCTTCTACCACAAT-CATCATATTTAGATAATCCAGTAAATACAACAGTTTTTGTAGGCA 420832 | | ||| | | ||||| |||| | | |||||| | ||| ||||||| ||||| Sbjct 63261 TTCTGTACTCCTTTCCATCAAATTTTCTAAGTGAAGTAAAGATAACCGTTTTTGCAGGCA 63320 Query 420833 TATTTACACCAACAGAAAAAGTTTCAGTTGCTAACAAAACTTTAATTAAtttttttGAAT 420892 | || | || | ||||||||| || || | || | |||||||| ||| | | | Sbjct 63321 TGTTAATTCCCATAGAAAAAGTCTCTGTAGAGAATAGTACTTTAATAAATGACTCTCCAA 63380 Query 420893 AAAGAATTTCAACAATTTCTTTTAAAATAGGAATTATACCAGAATGATGA 420942 |||||| ||||| ||||| |||| || ||||| || ||| ||||||| Sbjct 63381 AAAGAAGCTCAACTATTTCCTTTACAACAGGAAGTAAACCTCCATGATGA 63430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975695465613848