Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001483535.1_202015-12- 30] 906 sequences; 8,691,536 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq135 565 2e-155 seq12 262 3e-64 seq49 147 2e-29 seq221 114 1e-19 seq5 109 4e-18 seq783 96.9 3e-14 seq41 86.0 5e-11 >seq135 Length=20071 Score = 565 bits (626), Expect = 2e-155 Identities = 1078/1570 (69%), Gaps = 32/1570 (2%) Strand=Plus/Minus Query 517162 AGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAAT 517221 ||| || ||| ||| | ||||| | || | || ||||| || || |||||||| Sbjct 3130 AGCATCATTAACCATACGTTCAATATCGTCCTTTGATAATCTACCCTTATCGTTAGTAAT 3071 Query 517222 AGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATT 517281 ||| || || || || || ||||||| | |||| ||||| | |||||||| Sbjct 3070 AGTGATCTTGCTGCTCTTACCAGTGCTTTTATCAACAGCAGATACATTCAAGATACCATT 3011 Query 517282 GGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCC 517341 ||||| | |||||| |||||||||||||| || || ||||| | || ||||| || || Sbjct 3010 AGCATCAATATCAAAAGTGACTTCAATTTGTGGTACACCTCTTGGTGCTGGTGGAATACC 2951 Query 517342 TTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAA 517401 || | || || |||| || || ||||| ||||| | || |||||||| | Sbjct 2950 ATCAAGATGGAACTTTCCAAGGAGATGGTTATCCTTAGTCATGGCTCTCTCACCCTCATA 2891 Query 517402 AATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTC-TGGATTTTT 517460 || |||||| || | | || ||||| | |||||| || || ||| || || || Sbjct 2890 AACTTGGATCAAGACACCGCTCTGGTTATCAGCATAAGTAGTGAAGACTTGTGTCTTCTT 2831 Query 517461 TACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTA 517520 | | ||| | ||||| || | ||||||| |||||||||| |||||| || ||||||| Sbjct 2830 TGCTGGGA-TAGTTGTATTACGTTCAATAAGCTTGGTCATAACACCACCAGCAGTTTCTA 2772 Query 517521 AACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTT 517580 |||| || || | |||| ||||| | || | | || || | || | || Sbjct 2771 AACCGAGTGATAATGGAGCAACATCCAATAATAAGAGATCCTGTACGG---CAGAGGATT 2715 Query 517581 GACCAACA---AGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGAT 517637 | || || | ||||| ||||| | |||||||||||| |||||||||||||| |||| Sbjct 2714 GCTCACCATTTAAGATAGCAGCTTGTACAGCAGCACCATAAGCAACAGCTTCATCTGGAT 2655 Query 517638 TAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT--TGAAAGAAGTTGTCTTA-CCT 517694 | | | || | | | |||||| || ||| |||| |||| ||| | || | ||| Sbjct 2654 TGATTGCTTTGCATGGCTCTTTACCGTT-AAAGAATTCCTGAATCAAG--GCCTGAACCT 2598 Query 517695 TAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTT 517754 | |||||||| | || || ||||| ||||||| ||||| || | || |||| Sbjct 2597 TTGGAATACGTGTAGAACCACCAACCAATACAACATCATGTACAGATCTCTTGTCCATAC 2538 Query 517755 TTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAA 517814 | |||| | ||||| ||||| || | | | || | || | || | || | Sbjct 2537 CAGCATCCTTGAGTACTTTCTCAACTGGAGCTAAAGTTGCACGGAAGTAATCAGCGCAGA 2478 Query 517815 GTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAAT 517874 ||||||||||| | |||||| | | | || ||||||||| || || | | |||| Sbjct 2477 GTTCTTCGAATCTGGCTCTACTGATGGCAACTGAATAATCAATACCCTCATAGAGTGAAT 2418 Query 517875 CAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTG 517934 | | ||||| |||| |||||| ||||| || | | | || ||||| |||||| | Sbjct 2417 CTAACTCAATTGTAGCTTGAGTAGAAGATGACAAAGTTCTCTTTGCACGCTCACATTGAG 2358 Query 517935 TCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGT---TTTATATTTTCTCT 517991 | || ||||||| ||| ||| | || | | | ||||| | | ||| ||||||| Sbjct 2357 TTCTGAGTCTTCTTAAAGCTCTAGCATTTGAAGTTAAATCCATACCTCTATTCTTTCTCT 2298 Query 517992 TGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAG 518051 ||||||||| ||||| || || || | ||||||||||||||||| ||||| | || Sbjct 2297 TGAAATCTTGTACACAGAATTCCACGAGTCTGTTATCAAAATCTTCACCACCCAAGTGAG 2238 Query 518052 TATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACAT 518111 ||| || | |||||| | |||| |||| |||||||||| || || | | ||||| Sbjct 2237 TATCACCAGCGGTAGCTTTAACTTCAAAAATACCATCTTCAATAGTTAATAATGATACAT 2178 Query 518112 CATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTC--TTGGTTT-T 518168 || || |||||||| | ||| || || | |||||| | || | | || ||| | Sbjct 2177 CAAAAGTACCACCACCTAAATCGAAGATCAATACATTTCTCTC---GCCAGTTCCTTTCT 2121 Query 518169 TATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAA 518228 ||||||||||||| |||| |||||| |||||||| || ||||| ||||||| ||||| | Sbjct 2120 TATCAAGACCATAAGCAATAGCAGCTGCAGTTGGCTCGTTAATGATTCTCATTACATTCA 2061 Query 518229 GACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAG 518288 |||||||||| |||||||| || || ||||| | |||||| || || ||||| || | Sbjct 2060 AACCAGCAATTGCACCTGCATCCTTTGTTGCTTGACGTTGTGAGTCATTGAAATAAGCTG 2001 Query 518289 GAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCA 518348 ||||||||| || |||| | | || ||| | || || | ||| |||| Sbjct 2000 GAACAGTAACTACAGCATTCTTAATTTGGCGACCCAAGTATGCTTCAGAGATTTCCTTCA 1941 Query 518349 TTTTACTTAAAATCATTGATGAAATTTGTTCTG--GGGAATATTGCTTGGATTCATTTTG 518406 | || ||||| ||| | ||||||| ||| | ||| ||| ||| |||| | Sbjct 1940 TCTTTTGTAAAACCATAGCAGAAATTTCTTCAGCATGGA--ATTCCTTCTTTTCACCTAA 1883 Query 518407 ATATGATAC-TTCAAAATATGGTTTA---TTACCAACATTAATAACTTTAAATGGCCAGT 518462 || ||| | | || ||| ||| || | | ||| |||||||||||||||| Sbjct 1882 GTAGTTTACACTGATGAT-TGGCTTATCCTTTGGACCTCTAACTACTTTAAATGGCCAGT 1824 Query 518463 ATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCAT 518522 ||||||| ||| || || |||| ||| | ||||||||| | ||||| |||| Sbjct 1823 GAGTCATATCACTTTGTACTGCCTGATCATCAAACTTTCTACCAATAAGACGTTTAGCAT 1764 Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 |||||| || || |||||| | ||| |||||| || |||||||| ||||| ||| Sbjct 1763 CAAAAACTGTGTTTTCTGGATTTCTAGCAACTTGATTCTTTGCTGCATCACCAATAAGAC 1704 Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642 | || || || ||||||| ||||||||||| ||||| || ||||||||||| || | || Sbjct 1703 GCTCAGTTTCAGTAAATGCTACATATGATGGTGTTGTACGGTTACCTTGATCGTTTGGAA 1644 Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702 ||| || || || | ||| ||||||||| ||||| | || || |||||||||| Sbjct 1643 CAATATCTACAGTATCGTTTCTCCATACACCAACACATGAGTATGTGGTACCTAAATCAA 1584 Query 518703 TACCAATAGC 518712 |||||||||| Sbjct 1583 TACCAATAGC 1574 Score = 102 bits (112), Expect = 6e-16 Identities = 204/300 (68%), Gaps = 17/300 (6%) Strand=Plus/Minus Query 322085 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCTA-ATGTTCTAAATACTCC 322143 ||||||||||| || ||||| || |||| |||| | ||| | ||| ||| | || Sbjct 2262 TCAAAATCTTCACCACCCAAGTGAGTATCACCAGCGGTAGCTTTAACTTCAAAA-ATACC 2204 Query 322144 ATTTGAGATATTCATTAACGAAACATCTAAAGTCCCAGCTCCTAAGTCATAAACAATTAC 322203 || | ||| | | ||| || ||||| ||||| ||| | ||||| || | | | ||| Sbjct 2203 ATCTTCAATAGTTAATAATGATACATCAAAAGTACCACCACCTAAATCGAAGATCAATAC 2144 Query 322204 GTTAC---CACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGC 322260 || | | |||||| ||| || ||| | ||| || |||| ||| || Sbjct 2143 ATTTCTCTCGCCAGTTCCTTTCTTA------TCA------AGACCATAAGCAATAGCAGC 2096 Query 322261 TGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAG 322320 ||||||||| || ||||| ||| | | |||| ||||| |||||| | | | ||| Sbjct 2095 TGCAGTTGGCTCGTTAATGATTCTCATTACATTCAAACCAGCAATTGCACCTGCATCCTT 2036 Query 322321 AGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTATTAAT 322380 |||||||| | |||| |||||| ||||| ||||| ||||||| || || || ||||| Sbjct 2035 TGTTGCTTGACGTTGTGAGTCATTGAAATAAGCTGGAACAGTAACTACAGCATTCTTAAT 1976 >seq12 Length=82658 Score = 262 bits (290), Expect = 3e-64 Identities = 1025/1586 (65%), Gaps = 43/1586 (3%) Strand=Plus/Minus Query 517139 TTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAG 517198 || ||| |||| |||||| | ||| || ||||||| | ||| || | || | ||| Sbjct 73675 TTGTCTTCTTCGGCAAATTGCTCAGCCTCCTTAATCATACGCTCTATGTCTTCCTGTGAG 73616 Query 517199 AATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCG 517258 | ||| || || ||| || |||||||| |||| |||||| || ||||| Sbjct 73615 AGTCTACCCTTATCATTTGTGATAGTAATCTTCTCGGATTTACCAGTACCCTTATCCTTT 73556 Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 ||| | || | | |||||||| | ||| | ||||| || || |||||||| || || Sbjct 73555 GCACTAACTTGTAAAATACCATCAGTATCAATTTCAAAAGTAACCTCAATTTGGGGAACA 73496 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 ||||| |||| |||||||| || | | ||| |||| || || ||||| ||| Sbjct 73495 CCTCTTGGAGCTGGTGGGATTCCAGAAAGCTCGAATTTTCCGAGGAGGTTGTTATCCTTA 73436 Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT---TGATTATCTGAA 517435 || | | || |||||||| ||| |||||| | ||||| | ||||||||| Sbjct 73435 GTCATTGGACGCTCACCCTCATAAACCTGGATA---AGTACAGCTGGCTGATTATCTTGG 73379 Query 517436 TAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATT 517494 ||||| | || ||| ||| | || || |||| ||||||||| |||| | || Sbjct 73378 TAAGTACTGAAAACT-TGGCTCTTCTTGGTTGGAACAACAGTGTTTCTACCAATGAGCTT 73320 Query 517495 GGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGAC 517554 ||||||| ||||| | || || | ||| | || | |||||| ||||| | || | Sbjct 73319 TGTCATAACTCCACCAACAGTCTCAATACCTAAAGTTAAAGGAGTAACATCCAATA--AT 73262 Query 517555 AATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACC 517614 |||| || | | || || ||| | | ||| | ||||| | |||||||| Sbjct 73261 AATA-----AATCACTACCTCC--TTCACCTGCTAAGATACCAGCTTGTACGGCAGCACC 73209 Query 517615 ATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT- 517673 ||| || || |||||||| || |||| | ||| | | || |||| || || | Sbjct 73208 ATAAGCGACGGCTTCATCTGGGTTAATTCCTCTGTTTGGCTCCTTTCCATCAAAGAACTC 73149 Query 517674 -TTGAAAGAAG-TTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTC 517731 |||| | | ||| | |||||| ||||||| || || || || || || || || Sbjct 73148 CTTGATCAAGGCTTGAAT---CTTAGGGATACGAGTAGAACCACCTACCAAAACGATCTC 73092 Query 517732 ATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACC 517791 || || | || || | | | | |||| ||||| || | ||| || || | | Sbjct 73091 ATCTACTTCAGACTTTTTGATTCCAGCATCCTCCAAAACCTTCTTAACTGGCTCGATAGT 73032 Query 517792 CGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATA 517851 | ||| |||||||| | | | || ||||| |||||||| || | || | | Sbjct 73031 CTTTCTGAACAAGTCAGCATTCAACTCGTCGAACTTAGCTCTGGTCAAGGTTTCGCTCAG 72972 Query 517852 ATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGC 517911 ||| | | || | |||| |||| || | | || ||| | | ||||| || || Sbjct 72971 ATCTACATCCTCCATCAAACCTTCAATCTCGACCTTAACTTGTGGAGCTGAAGAAAGGGC 72912 Query 517912 ACGTTTAGCACGTTCACATGCTGTCCT-TAGTCTTCGTAAGGCTTTTGCTGATTGA-TTC 517969 | || | || ||| | || || | || |||| |||| | | || || || Sbjct 72911 TCTCTTCG-AC-TTCTCGACCTCTCTTCTAAGCTTCTGAAGGGCTCTCTTGTCAGACTTT 72854 Query 517970 AAATCTGTTTTATAT-TTTCTCTTGAA-ATCTTCAACACACCATGTTACAAGACGATT-- 518025 | ||| ||| | | ||| ||||| ||||| | | || | || || | Sbjct 72853 ACATCC-TTTCCTGTCTTTGACTTGATGATCTTGATAAAG---TGGTCCATAACTCTCTG 72798 Query 518026 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 518085 ||| ||||| ||||||||||| | |||| || ||||| || | ||||| || Sbjct 72797 ATCGAAATCCTCACCTCCCAAATGGGTATCACCACTTGTAGCAACGACCTCGAAAACGCC 72738 Query 518086 ATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 518145 | |||| | ||| |||| |||||| || |||||||||| ||| | | | | Sbjct 72737 GTTATCAATGGTCAAGAGAGAAACATCAAAAGTACCACCACCCAAATCGTATACTA--AA 72680 Query 518146 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 518205 || | |||| | ||| | ||||| | |||| | |||| || || || ||||| || Sbjct 72679 ATGCTCTTCTCAG-CTT---TCTTATCCAAACCAAAAGCAATTGCTGCTGCTGTTGGCTC 72624 Query 518206 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 518265 ||||||||| | | ||||| | ||||||||| || ||||| || || || || | Sbjct 72623 ATTAATAATACGGATTACATTCAAACCAGCAATAGCACCAGCATCCTTGGTAGCCTGACG 72564 Query 518266 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAAT 518325 || | ||| ||||| || || || |||||||| || |||| ||||||| ||||| | Sbjct 72563 CTGAGCATCATTAAAGTAAGCTGGGACAGTAATTACTGCATGCTTTACTTCCTTACCGAG 72504 Query 518326 ATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGA 518385 |||||| || ||| |||||| || || | ||| | |||| | |||||||| Sbjct 72503 ATAAGCCTCAGCAATTTCTTTCATCTTGAGCAAGACCATAGCGGAAACCTCTTCTGGGGC 72444 Query 518386 ATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAAT 518445 ||||||| ||| | | || |||| | || || || || | ||||| Sbjct 72443 TAATTGCTTCTTCTCACCCTTAACAGAAACTTGTATGTAAGGCTTGCTATCTTTGTTAAT 72384 Query 518446 AACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACC 518505 || | | |||| | | || |||| ||| ||| | || |||||| | ||| Sbjct 72383 AATCTCATATGGTAACAAAGTCTTATCCTTTTGGACAGAATCATCCTTAAAACGACGACC 72324 Query 518506 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGC 518565 ||| | || ||| | || || | ||| | |||||| || | |||||||| ||||| Sbjct 72323 AATAAGTCTCTTTACGTCGAACAAAGTCTGAACTGGATTGATAGTAGCTTGATTCTTGGC 72264 Query 518566 TGCATCTCCAATCAGATGT-TCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGAT 518624 || || ||||||| || | || || || ||||| ||||||||||| || | |||| Sbjct 72263 TGATTCACCAATCA-ATCTCTCATCATCAGTGAATGATACATATGATGGTGTAATACGAT 72205 Query 518625 TACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAA 518684 ||||||| ||||| | |||||| || ||| ||||||| | | | ||| ||||| | Sbjct 72204 TACCTTGTTCATTTGGAATAATCTCTACTCTACCATTCTTGTAGATACCAACACATGAAT 72145 Query 518685 AAGTTGTTCCTAAATCAATACCAATA 518710 |||| || |||||||| ||||||||| Sbjct 72144 AAGTAGTACCTAAATCGATACCAATA 72119 >seq49 Length=42749 Score = 147 bits (162), Expect = 2e-29 Identities = 337/493 (68%), Gaps = 27/493 (5%) Strand=Plus/Plus Query 517155 ATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTAT 517214 |||||| ||||||||| |||||| ||||||||| | | || | | ||| || || Sbjct 35862 ATTCTTCAGCTTCTCTGATCATTTTCTCAATTTCAGCACCACTTAGACCTCCA-GAAGAT 35920 Query 517215 TAGTAATAGTAATATTCTTGGATTTGTTT---GTTGATTTATCAGCGGCAGTCACATTAA 517271 | |||||| || | | || ||| ||| ||||| |||||| ||| ||||| | Sbjct 35921 TG--AATAGTGATCT-CGTG--TTTCTTTCCAGTTGACTTATCAATTGCACCAACATTCA 35975 Query 517272 GAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAG 517331 ||| ||||| ||||| | |||||| ||||||||||||||||| |||||||| | || | Sbjct 35976 TAATTCCATTTGCATCAATATCAAAGGTGACTTCAATTTGAGGAACCCCTCTGGGTGCTG 36035 Query 517332 GTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTT 517391 | || || || || | |||| ||| || |||||||| || |||| || || Sbjct 36036 GAGGAATTCCCATCATTTCAAATTGTCCAAGCAACTTATTATCAGCAGCAAATTCTCTTT 36095 Query 517392 CACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTC 517451 | || | ||||| || || |||| ||||||||| |||| | ||| | |||||| Sbjct 36096 CTCCTTGGAAAACTTTAATTCCAACTTGAGTTTGATTGTCTGCAGCAGTGGAGAATACT- 36154 Query 517452 TGGAT-TTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTG-GTCATAATACCACC 517509 ||| | |||||| || ||||| || ||||| | ||| | || | || | || ||||| Sbjct 36155 TGGCTCTTTTTAGTGGGTATTGTGGTATTTCTGTTAATTA-ATCGAGTAAAAACTCCACC 36213 Query 517510 TGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT-TTTGAAGTT 517568 ||||| | ||| | ||| | || || || || | || | || || |||| Sbjct 36214 CAAAGTTTCAATACCTAAAGATAAGGGTGTAACGTCGAGTAACAAAAGATCCTTGA---- 36269 Query 517569 TTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 517628 |||| || || ||| || | | ||||| |||||||| || ||||||||||| Sbjct 36270 TTTC-TCCCTT----CAA----AACACCAGCTTGTATAGCAGCTCCCATTGCAACAGCTT 36320 Query 517629 CATCAGGATTAAC 517641 | ||||| ||||| Sbjct 36321 CGTCAGGGTTAAC 36333 Score = 96.9 bits (106), Expect = 3e-14 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 || || |||| ||| || || ||||| |||||||| ||||| ||||| | || || Sbjct 36872 CCGTATGCAAGAGCTGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAGCCTGCT 36931 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296 || || ||||| ||||| ||||| | || ||||| ||||| || || || |||||| Sbjct 36932 ATAGAGCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTA 36991 Query 518297 ATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTT 518352 ||||| |||| |||| | |||||| ||||| || |||| ||||||||| Sbjct 36992 ATAACAGCATGCTTTACACTTCTACCAAGATAAGTTTCGGCAGTTTCTTTCATTTT 37047 Score = 96.9 bits (106), Expect = 3e-14 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 322244 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 322303 |||||||||||||||||||| ||||| |||||||| ||| | |||| ||| || || Sbjct 36872 CCGTATGCAAGAGCTGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAGCCTGCT 36931 Query 322304 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 322363 || ||| ||| ||||||||| | ||| | |||||||| || ||||| |||||| Sbjct 36932 ATAGAGCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTA 36991 Query 322364 ATAACTGC 322371 ||||| || Sbjct 36992 ATAACAGC 36999 >seq221 Length=9066 Score = 114 bits (126), Expect = 1e-19 Identities = 334/503 (66%), Gaps = 16/503 (3%) Strand=Plus/Plus Query 636275 TATTATGATTTCATTCACAAAGAACTTATTACTTTTTCTGTGGATGACGTTCT--TAGAT 636332 |||| |||||| ||||| ||||||||| | || || || ||| | || ||||| Sbjct 1584 TATTTTGATTTTATTCATAAAGAACTTGTA--TTATTTAGTAGATATGATACTACTAGAT 1641 Query 636333 CTGTTCCTAATTTAATGGATGGATTTAAACCATCACATCGCAAAGTATTTTATGGTTCTG 636392 || |||| |||||| | ||||| || ||||| ||| | |||||| ||| || | Sbjct 1642 CTATTCCAAATTTATTAGATGGTTTAAAACCTGGACAAAGAAAAGTACTTTTTGCAACAT 1701 Query 636393 TTGAAAAGAATATTTATAAGCAAGAGATTAAAGTATCAGATTTGACTGGTTTTGTCTC-G 636451 || |||| || || |||| || ||||||| || | || |||||| ||| | | Sbjct 1702 TTAAAAA-AAGCTTAATAATGAAC---TTAAAGTTGCACAATTAGCTGGTTATGTTGCTG 1757 Query 636452 AATATGACGAAATATCATCATGGTGATCAATCATTATCATCAACTATTGTCGGAATGGCT 636511 || || | ||||||||||| || ||||||| | |||||||| |||||| Sbjct 1758 AACATAGTGCT-TATCATCATGGAGAATCATCATTACAAAGTACTATTGTTAATATGGCT 1816 Query 636512 CAAAATTATGTGGGAAGTAACAATCTCAATTTGTTAATGCCATTGGGAATGTTTGGATCT 636571 ||||||| ||| |||||||| ||||| ||| ||||| |||| || ||||| | Sbjct 1817 CAAAATTTTGTTGGAAGTAATAATCTAAATCTGTTAGAACCATGTGGTCAATTTGGTAGT 1876 Query 636572 AGATTGACCGGAGGTAAAGATTCAGCGAGTCCTAGGTATTTGAACACTAAATTAGATGAT 636631 ||| || || |||||| || | || | ||| | ||||| || | | Sbjct 1877 AGAAAAGAAGGTGGAAAAGATGCAAGTGCTGCTCGTTATATATTTACTAAGCTATCTAAA 1936 Query 636632 TTGGCAAAGAAAATCTTCATTGATTATGATTTTGATATTCTTCAACATCAGTCAGAAGAT 636691 | | | | | || ||| || |||| | | || || ||| | | | | | ||| Sbjct 1937 TGGACTAGATATATTTTCCCAGAGGCTGATGATCCT-TTATT-AAC-TTATTTATATGAT 1993 Query 636692 AATTG---TCGAATTGAACCTGTTTATTATGCTCCTATTATTCCAATGATACTTGTAAAT 636748 || | | |||||||||| | ||||||| ||| || ||||||||||| | |||||| Sbjct 1994 GATGGACAACAAATTGAACCTTTATATTATGTTCCAATAATTCCAATGATTTTGGTAAAT 2053 Query 636749 GGAGCTGAAGGAATTGGTACTGG 636771 || |||| ||||||||||| || Sbjct 2054 GGTACTGATGGAATTGGTACAGG 2076 >seq5 Length=122375 Score = 109 bits (120), Expect = 4e-18 Identities = 320/483 (66%), Gaps = 24/483 (5%) Strand=Plus/Plus Query 303735 AAGTCCACCATCTCTTGATCTACCTTCTGGCGCTTGTCTTGTAAGTAACTGTGT-TGGTC 303793 ||| || || || |||| ||| |||||| | |||||| || || | |||| || || Sbjct 63676 AAGCCCTCCTTCCCTTGCTCTTCCTTCTCTTGGTTGTCTGGTTAGCAT-TGTGACTGCTC 63734 Query 303794 CACGAGCGCGTGAGTGGGCCTTGTCGCCTACCATTTGTTTCAATCTCTGATAATATGTCG 303853 | | ||| | | || || ||| | ||||| ||||| | ||||||||| || || | Sbjct 63735 CTCTAGCTCTAGCATGAATTTTATCGTCAACCATATGTTTTAGTCTCTGATAGTAAGTTG 63794 Query 303854 GACCAATAAAAATTTTA-ACTGGTAATTTTTTACCATTCATTCCATTATACATAGTTTCA 303912 | |||||||| ||| | ||| ||| | || || | ||||| ||||| |||| Sbjct 63795 GCCCAATAAAGATTCTCGACTCC-AATCTCTTTCCCGTATGGCCATTGTACATTACTTCA 63853 Query 303913 TTACCCCATTCTTCATAACCAGCAGCAACTAATTCATCGT-TA---ATGGCATTAAGATC 303968 || || ||| ||| || | | | ||||| | | || || || | | || Sbjct 63854 TTTCC--ATTTTTCTGAAAC--CCGGAACTATGTAAACGGCTAGATATCTCTTCAACTGT 63909 Query 303969 AACACTTGTAAATGGTGTTGCATCGCCATACACTCCTTTAACTGCACATAGTTTTCCTAA 304028 || | ||||| || ||||||||||| | || ||||| || ||| || ||| || | Sbjct 63910 AATTTTCGTAAAAGGAGTTGCATCGCCCTCCAATCCTTGAATTGCGCACGCTTTGCCAAG 63969 Query 304029 TAAACATTCAATAAGTTGCCCAATAGTCATACGTTTGGGCATACAATTAGGATTGATAAT 304088 || ||||||||| | || ||||| |||||||| || ||| || |||||| ||||| Sbjct 63970 TAGACATTCAATTAAATGGCCAATTGTCATACGCGAAGGAATAGCATGAGGATTCATAAT 64029 Query 304089 AATATCGGGAATTAATCCAGATTTACTGAATAACATATCTGCTCGATGAGCTTTGTAT-- 304146 ||| || ||||| | ||| || | ||| |||||| ||| || | ||||| Sbjct 64030 AATGTCTGGAATAATCCCATCTTGTGTAAATGGCATATC--CTC----AGTTCTGTATGT 64083 Query 304147 ----CCAATGGTACCTTTTTGACCTGCTCTTGACGAAAATTTATCACCTACATTGGGAAT 304202 || || ||||| ||||| || ||| || | ||| ||||| || |||| || || Sbjct 64084 TATACCGATTGTACCCTTTTGGCCATGTCTAGATGCAAACTTATCTCCAACATGAGGTAT 64143 Query 304203 TCT 304205 ||| Sbjct 64144 TCT 64146 >seq783 Length=538 Score = 96.9 bits (106), Expect = 3e-14 Identities = 222/338 (66%), Gaps = 30/338 (9%) Strand=Plus/Plus Query 634316 ATTACTTATGTACCTGGTCTATATAAAATTTATGATGAAGTAATTGTAAATGCGGCAGAT 634375 |||| ||||||||||||| ||||||| |||| ||||||| | | || ||||| || ||| Sbjct 141 ATTAATTATGTACCTGGTTTATATAAGATTTTTGATGAAATCTTAGTTAATGCTGCTGAT 200 Query 634376 CATAA--CAAGAGA-------------------------TGTCAAACATGTAATATTATC 634408 ||| | ||||| | | ||| ||||| | ||| Sbjct 201 GTTAAAGCTAGAGAAATTTCAACTAAAAATAATCATATTTTTGAAAAATGTACTTGTATT 260 Query 634409 AAAGTTGATATCGATCAA-AAAACAGGTCAAATTTCTGTTTGGAATAATGGTGATGGTAT 634467 |||||||| || || | |||| | | ||||| |||| | ||| |||| || || || Sbjct 261 AAAGTTGAAATTAATAGAGAAAAAAAG--AAATTACTGTATTTAATGATGGAGAAGGAAT 318 Query 634468 TGATGTAGCAATTCATAAAGAACATAATATATGGGTACCATCAATGATTTTTGGAGAACT 634527 | | ||| |||| ||||||| | ||| || ||| | | ||||||||| | | Sbjct 319 ACCAATTGAAATACATAGAGAACATCAAGTATATGTTCCAGAATTAATTTTTGGACATTT 378 Query 634528 TTTAACGTCTACTAATTACGATAAAAACGAGGAAAAAACTGTTGGTGGTAAAAATGGTTT 634587 ||||| ||| |||||| ||| | || || || | | | ||| || | ||||||||| Sbjct 379 ATTAACTTCTGATAATTATGATGATAATGAAGATAGAGTTACTGGAGGAAGAAATGGTTT 438 Query 634588 TGGCGCTAAGCTTGCTAATATTTATTCTGTTGAATTTA 634625 ||| || || ||| ||||||| | ||| ||||||| Sbjct 439 TGGAGCAAAACTTACTAATATATTCTCTAAAGAATTTA 476 >seq41 Length=47962 Score = 86.0 bits (94), Expect = 5e-11 Identities = 127/179 (71%), Gaps = 1/179 (1%) Strand=Plus/Minus Query 668849 TTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCT 668908 |||| |||||||||||| ||| | ||||||||||||| || ||| | || ||| | | Sbjct 31667 TTAA-AGGTAAAGAAGGACGTTTCAGAGGAAATTTGAGTGGTAAAAGAGTTGATTTTAGT 31609 Query 668909 GCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTT 668968 | | | || |||||| || |||| || ||||||| | ||||||||| || ||| | Sbjct 31608 GGAAGGACTGTTATTTCTCCTGACCCTAATATTGAAGTTGATGAAGTTGTAGTACCTATG 31549 Query 668969 ATTATTGCTAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGAGTATTT 669027 || ||||| || || | |||| | ||||| || | | ||||||||| | ||| Sbjct 31548 ATCATTGCAAAGAAATTGACTTATCCCGAAAGAGTTAATGCTATTAATATTGACTCTTT 31490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780777441295636