Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001483535.1_202015-12- 30] 906 sequences; 8,691,536 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq135 554 3e-152 seq12 253 2e-61 seq49 147 2e-29 seq221 114 1e-19 seq5 102 6e-16 seq783 96.9 3e-14 >seq135 Length=20071 Score = 554 bits (614), Expect = 3e-152 Identities = 1078/1572 (69%), Gaps = 36/1572 (2%) Strand=Plus/Minus Query 281329 AGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAAT 281388 ||| || ||| ||| | ||||| | || | || ||||| || || |||||||| Sbjct 3130 AGCATCATTAACCATACGTTCAATATCGTCCTTTGATAATCTACCCTTATCGTTAGTAAT 3071 Query 281389 AGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATT 281448 ||| || || || || || ||||||| | |||| ||||| | |||||||| Sbjct 3070 AGTGATCTTGCTGCTCTTACCAGTGCTTTTATCAACAGCAGATACATTCAAGATACCATT 3011 Query 281449 GGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCC 281508 ||||| | |||||| |||||||||||||| || || ||||| | || ||||| || || Sbjct 3010 AGCATCAATATCAAAAGTGACTTCAATTTGTGGTACACCTCTTGGTGCTGGTGGAATACC 2951 Query 281509 TTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAA 281568 || | || || |||| || || ||||| ||||| | || |||||||| | Sbjct 2950 ATCAAGATGGAACTTTCCAAGGAGATGGTTATCCTTAGTCATGGCTCTCTCACCCTCATA 2891 Query 281569 AATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTC-TGGATTTTT 281627 || |||||| || | | || ||||| | |||||| || || ||| || || || Sbjct 2890 AACTTGGATCAAGACACCGCTCTGGTTATCAGCATAAGTAGTGAAGACTTGTGTCTTCTT 2831 Query 281628 TACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTA 281687 | | ||| | ||||| || | ||||||| |||||||||| ||||||||| ||||||| Sbjct 2830 TGCTGGGA-TAGTTGTATTACGTTCAATAAGCTTGGTCATAACACCACCAGCAGTTTCTA 2772 Query 281688 AACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTT 281747 |||| || || | |||| ||||| | || | | || || | || | || Sbjct 2771 AACCGAGTGATAATGGAGCAACATCCAATAATAAGAGATCCTGTACGG---CAGAGGATT 2715 Query 281748 GACCAACA---AGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGAT 281804 | || || | ||||| ||||| | |||||||||||| |||||||||||||| |||| Sbjct 2714 GCTCACCATTTAAGATAGCAGCTTGTACAGCAGCACCATAAGCAACAGCTTCATCTGGAT 2655 Query 281805 TAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT--TGAAAGAAGTTGTCTTA-CCT 281861 | | | || | | | |||||| || ||| |||| |||| ||| | || | ||| Sbjct 2654 TGATTGCTTTGCATGGCTCTTTACCGTT-AAAGAATTCCTGAATCAAG--GCCTGAACCT 2598 Query 281862 TAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTT 281921 | |||||||| | || || ||||| ||||||| ||||| || | || |||| Sbjct 2597 TTGGAATACGTGTAGAACCACCAACCAATACAACATCATGTACAGATCTCTTGTCCATAC 2538 Query 281922 TTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAA 281981 | |||| | ||||| ||||| || | | | || | || | || | || | Sbjct 2537 CAGCATCCTTGAGTACTTTCTCAACTGGAGCTAAAGTTGCACGGAAGTAATCAGCGCAGA 2478 Query 281982 GTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAAT 282041 ||||||||||| | |||||| | | | || ||||||||| || || | | |||| Sbjct 2477 GTTCTTCGAATCTGGCTCTACTGATGGCAACTGAATAATCAATACCCTCATAGAGTGAAT 2418 Query 282042 CAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTG 282101 | | ||||| |||| |||||| ||||| || | | | || ||||| |||||| | Sbjct 2417 CTAACTCAATTGTAGCTTGAGTAGAAGATGACAAAGTTCTCTTTGCACGCTCACATTGAG 2358 Query 282102 TCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGT---TTTATATTTTCTCT 282158 | || ||||||| ||| ||| | || | | | ||||| | | ||| ||||||| Sbjct 2357 TTCTGAGTCTTCTTAAAGCTCTAGCATTTGAAGTTAAATCCATACCTCTATTCTTTCTCT 2298 Query 282159 TGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAG 282218 ||||||||| ||||| || || || | ||||||||||||||||| ||||| | || Sbjct 2297 TGAAATCTTGTACACAGAATTCCACGAGTCTGTTATCAAAATCTTCACCACCCAAGTGAG 2238 Query 282219 TATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACAT 282278 ||| || | |||||| | |||| |||| |||||||||| || || | | |||| Sbjct 2237 TATCACCAGCGGTAGCTTTAACTTCAAAAATACCATCTTCAATAGTTAATAATGATACAT 2178 Query 282279 CATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTC--TTGGTTT-T 282335 || || |||||||| | ||| || || | |||||| | || | | || ||| | Sbjct 2177 CAAAAGTACCACCACCTAAATCGAAGATCAATACATTTCTCTC---GCCAGTTCCTTTCT 2121 Query 282336 TATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAA 282395 ||||||||||||| |||| |||||| |||||||| || ||||| ||||||| ||||| | Sbjct 2120 TATCAAGACCATAAGCAATAGCAGCTGCAGTTGGCTCGTTAATGATTCTCATTACATTCA 2061 Query 282396 GACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAG 282455 |||||||||| |||||||| || || ||||| | |||||| || || ||||| || | Sbjct 2060 AACCAGCAATTGCACCTGCATCCTTTGTTGCTTGACGTTGTGAGTCATTGAAATAAGCTG 2001 Query 282456 GAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAG--CGCTT--GCTGTTTGT 282511 ||||||||| || |||| | ||| ||| | | ||| |||| | ||| Sbjct 2000 GAACAGTAACTACAGCAT-TCTTA---ATTTGGCGACCCAAGTATGCTTCAGAGATTTCC 1945 Query 282512 TTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCATTT 282571 ||||| || ||||| ||| | ||||||| ||| | | ||| ||| |||| | Sbjct 1944 TTCATCTTTTGTAAAACCATAGCAGAAATTTCTTCAGCATGGAATTCCTTCTTTTCACCT 1885 Query 282572 TGATATGATAC-TTCAAAATATGGTTTA---TTACCAACATTAATAACTTTAAATGGCCA 282627 || ||| | | || ||| ||| || | | ||| |||||||||||||| Sbjct 1884 AAGTAGTTTACACTGATGAT-TGGCTTATCCTTTGGACCTCTAACTACTTTAAATGGCCA 1826 Query 282628 ATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGC 282687 | ||||||| ||| || || |||| ||| | ||||||||| | ||||| || Sbjct 1825 GTGAGTCATATCACTTTGTACTGCCTGATCATCAAACTTTCTACCAATAAGACGTTTAGC 1766 Query 282688 ATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAG 282747 |||||||| || || |||||| ||| |||||| || |||||||| ||||| || Sbjct 1765 ATCAAAAACTGTGTTTTCTGGATTTCTAGCAACTTGATTCTTTGCTGCATCACCAATAAG 1706 Query 282748 ATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGC 282807 | | || || || ||||||| ||||||||||| ||||| || ||||||||||| || | Sbjct 1705 ACGCTCAGTTTCAGTAAATGCTACATATGATGGTGTTGTACGGTTACCTTGATCGTTTGG 1646 Query 282808 AATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATC 282867 || ||| || || || | ||| ||||||||| ||||| | || || |||||||| Sbjct 1645 AACAATATCTACAGTATCGTTTCTCCATACACCAACACATGAGTATGTGGTACCTAAATC 1586 Query 282868 AATACCAATAGC 282879 |||||||||||| Sbjct 1585 AATACCAATAGC 1574 Score = 93.3 bits (102), Expect = 3e-13 Identities = 202/300 (67%), Gaps = 17/300 (6%) Strand=Plus/Minus Query 85960 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCCA-ATGTTCTAAATACTCC 86018 ||||||||||| || ||||| || |||| |||| | || | ||| ||| | || Sbjct 2262 TCAAAATCTTCACCACCCAAGTGAGTATCACCAGCGGTAGCTTTAACTTCAAAA-ATACC 2204 Query 86019 ATTTGAGATATTCATTAACGAAACATCTAATGTCCCAGCTCCTAAGTCATAAACAATTAC 86078 || | ||| | | ||| || ||||| || || ||| | ||||| || | | | ||| Sbjct 2203 ATCTTCAATAGTTAATAATGATACATCAAAAGTACCACCACCTAAATCGAAGATCAATAC 2144 Query 86079 GTTAC---CACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGC 86135 || | | |||||| ||| || ||| | ||| || |||| ||| || Sbjct 2143 ATTTCTCTCGCCAGTTCCTTTCTTA------TCA------AGACCATAAGCAATAGCAGC 2096 Query 86136 TGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAG 86195 ||||||||| || ||||| ||| | | |||| ||||| |||||| | | | ||| Sbjct 2095 TGCAGTTGGCTCGTTAATGATTCTCATTACATTCAAACCAGCAATTGCACCTGCATCCTT 2036 Query 86196 AGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTATTAAT 86255 |||||||| | |||| |||||| ||||| ||||| ||||||| || || || ||||| Sbjct 2035 TGTTGCTTGACGTTGTGAGTCATTGAAATAAGCTGGAACAGTAACTACAGCATTCTTAAT 1976 >seq12 Length=82658 Score = 253 bits (280), Expect = 2e-61 Identities = 1023/1586 (65%), Gaps = 43/1586 (3%) Strand=Plus/Minus Query 281306 TTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAG 281365 || ||| |||| |||||| | ||| || ||||||| | ||| || | || | ||| Sbjct 73675 TTGTCTTCTTCGGCAAATTGCTCAGCCTCCTTAATCATACGCTCTATGTCTTCCTGTGAG 73616 Query 281366 AATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCG 281425 | ||| || || ||| || |||||||| |||| |||||| || ||||| Sbjct 73615 AGTCTACCCTTATCATTTGTGATAGTAATCTTCTCGGATTTACCAGTACCCTTATCCTTT 73556 Query 281426 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 281485 ||| | || | | |||||||| | ||| | ||||| || || |||||||| || || Sbjct 73555 GCACTAACTTGTAAAATACCATCAGTATCAATTTCAAAAGTAACCTCAATTTGGGGAACA 73496 Query 281486 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 281545 ||||| |||| |||||||| || | | ||| |||| || || ||||| ||| Sbjct 73495 CCTCTTGGAGCTGGTGGGATTCCAGAAAGCTCGAATTTTCCGAGGAGGTTGTTATCCTTA 73436 Query 281546 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT---TGATTATCTGAA 281602 || | | || |||||||| ||| |||||| | ||||| | ||||||||| Sbjct 73435 GTCATTGGACGCTCACCCTCATAAACCTGGATA---AGTACAGCTGGCTGATTATCTTGG 73379 Query 281603 TAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATT 281661 ||||| | || ||| ||| | || || |||| ||||||||| |||| | || Sbjct 73378 TAAGTACTGAAAACT-TGGCTCTTCTTGGTTGGAACAACAGTGTTTCTACCAATGAGCTT 73320 Query 281662 GGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGAC 281721 ||||||| |||||| | || || | ||| | || | |||||| ||||| | || | Sbjct 73319 TGTCATAACTCCACCAACAGTCTCAATACCTAAAGTTAAAGGAGTAACATCCAATA--AT 73262 Query 281722 AATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACC 281781 |||| || | | || || ||| | | ||| | ||||| | |||||||| Sbjct 73261 AATA-----AATCACTACCTCC--TTCACCTGCTAAGATACCAGCTTGTACGGCAGCACC 73209 Query 281782 ATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT- 281840 ||| || || |||||||| || |||| | ||| | | || |||| || || | Sbjct 73208 ATAAGCGACGGCTTCATCTGGGTTAATTCCTCTGTTTGGCTCCTTTCCATCAAAGAACTC 73149 Query 281841 -TTGAAAGAAG-TTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTC 281898 |||| | | ||| | |||||| ||||||| || || || || || || || || Sbjct 73148 CTTGATCAAGGCTTGAAT---CTTAGGGATACGAGTAGAACCACCTACCAAAACGATCTC 73092 Query 281899 ATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACC 281958 || || | || || | | | | |||| ||||| || | ||| || || | | Sbjct 73091 ATCTACTTCAGACTTTTTGATTCCAGCATCCTCCAAAACCTTCTTAACTGGCTCGATAGT 73032 Query 281959 AGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATA 282018 ||| |||||||| | | | || ||||| |||||||| || | || | | Sbjct 73031 CTTTCTGAACAAGTCAGCATTCAACTCGTCGAACTTAGCTCTGGTCAAGGTTTCGCTCAG 72972 Query 282019 ATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGC 282078 ||| | | || | |||| |||| || | | || ||| | | ||||| || || Sbjct 72971 ATCTACATCCTCCATCAAACCTTCAATCTCGACCTTAACTTGTGGAGCTGAAGAAAGGGC 72912 Query 282079 ACGTTTAGCACGTTCACATGCTGTCCT-TAGTCTTCGTAAGGCTTTTGCTGATTGA-TTC 282136 | || | || ||| | || || | || |||| |||| | | || || || Sbjct 72911 TCTCTTCG-AC-TTCTCGACCTCTCTTCTAAGCTTCTGAAGGGCTCTCTTGTCAGACTTT 72854 Query 282137 AAATCTGTTTTATAT-TTTCTCTTGAA-ATCTTCAACACACCATGTTACAAGACGATT-- 282192 | ||| ||| | | ||| ||||| ||||| | | || | || || | Sbjct 72853 ACATCC-TTTCCTGTCTTTGACTTGATGATCTTGATAAAG---TGGTCCATAACTCTCTG 72798 Query 282193 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 282252 ||| ||||| ||||||||||| | |||| || ||||| || | ||||| || Sbjct 72797 ATCGAAATCCTCACCTCCCAAATGGGTATCACCACTTGTAGCAACGACCTCGAAAACGCC 72738 Query 282253 ATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 282312 | |||| | ||| |||| ||||||| || |||||||||| ||| | | | | Sbjct 72737 GTTATCAATGGTCAAGAGAGAAACATCAAAAGTACCACCACCCAAATCGTATACTA--AA 72680 Query 282313 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 282372 || | |||| | ||| | ||||| | |||| | |||| || || || ||||| || Sbjct 72679 ATGCTCTTCTCAG-CTT---TCTTATCCAAACCAAAAGCAATTGCTGCTGCTGTTGGCTC 72624 Query 282373 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 282432 ||||||||| | | ||||| | ||||||||| || ||||| || || || || | Sbjct 72623 ATTAATAATACGGATTACATTCAAACCAGCAATAGCACCAGCATCCTTGGTAGCCTGACG 72564 Query 282433 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAAT 282492 || | ||| ||||| || || || |||||||| || |||| ||||||| || || | Sbjct 72563 CTGAGCATCATTAAAGTAAGCTGGGACAGTAATTACTGCATGCTTTACTTCCTTACCGAG 72504 Query 282493 ATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGA 282552 |||||| || ||| |||||| || || | ||| | |||| | |||||| | Sbjct 72503 ATAAGCCTCAGCAATTTCTTTCATCTTGAGCAAGACCATAGCGGAAACCTCTTCTGGGGC 72444 Query 282553 ATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAAT 282612 ||||||| ||| | | || |||| | || || || || | ||||| Sbjct 72443 TAATTGCTTCTTCTCACCCTTAACAGAAACTTGTATGTAAGGCTTGCTATCTTTGTTAAT 72384 Query 282613 AACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACC 282672 || | | |||| | | || |||| ||| ||| | || |||||| | ||| Sbjct 72383 AATCTCATATGGTAACAAAGTCTTATCCTTTTGGACAGAATCATCCTTAAAACGACGACC 72324 Query 282673 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGC 282732 ||| | || ||| | || || | ||| | |||||| | | |||||||| ||||| Sbjct 72323 AATAAGTCTCTTTACGTCGAACAAAGTCTGAACTGGATTGATAGTAGCTTGATTCTTGGC 72264 Query 282733 TGCATCTCCAATCAGATGT-TCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGAT 282791 || || ||||||| || | || || || ||||| ||||||||||| || | |||| Sbjct 72263 TGATTCACCAATCA-ATCTCTCATCATCAGTGAATGATACATATGATGGTGTAATACGAT 72205 Query 282792 TACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAA 282851 ||||||| ||||| | |||||| || ||| ||||||| | | | ||| ||||| | Sbjct 72204 TACCTTGTTCATTTGGAATAATCTCTACTCTACCATTCTTGTAGATACCAACACATGAAT 72145 Query 282852 AAGTTGTTCCTAAATCAATACCAATA 282877 |||| || |||||||| ||||||||| Sbjct 72144 AAGTAGTACCTAAATCGATACCAATA 72119 >seq49 Length=42749 Score = 147 bits (162), Expect = 2e-29 Identities = 337/493 (68%), Gaps = 27/493 (5%) Strand=Plus/Plus Query 281322 ATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTAT 281381 |||||| ||||||||| |||||| ||||||||| | | || | | ||| || || Sbjct 35862 ATTCTTCAGCTTCTCTGATCATTTTCTCAATTTCAGCACCACTTAGACCTCCA-GAAGAT 35920 Query 281382 TAGTAATAGTAATATTCTTGGATTTGTTT---GTTGATTTATCAGCGGCAGTCACATTAA 281438 | |||||| || | | || ||| ||| ||||| |||||| ||| ||||| | Sbjct 35921 TG--AATAGTGATCT-CGTG--TTTCTTTCCAGTTGACTTATCAATTGCACCAACATTCA 35975 Query 281439 GAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAG 281498 ||| ||||| ||||| | |||||| ||||||||||||||||| |||||||| | || | Sbjct 35976 TAATTCCATTTGCATCAATATCAAAGGTGACTTCAATTTGAGGAACCCCTCTGGGTGCTG 36035 Query 281499 GTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTT 281558 | || || || || | |||| ||| || |||||||| || |||| || || Sbjct 36036 GAGGAATTCCCATCATTTCAAATTGTCCAAGCAACTTATTATCAGCAGCAAATTCTCTTT 36095 Query 281559 CACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTC 281618 | || | ||||| || || |||| ||||||||| |||| | ||| | |||||| Sbjct 36096 CTCCTTGGAAAACTTTAATTCCAACTTGAGTTTGATTGTCTGCAGCAGTGGAGAATACT- 36154 Query 281619 TGGAT-TTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTG-GTCATAATACCACC 281676 ||| | |||||| || ||||| || ||||| | ||| | || | || | || ||||| Sbjct 36155 TGGCTCTTTTTAGTGGGTATTGTGGTATTTCTGTTAATTA-ATCGAGTAAAAACTCCACC 36213 Query 281677 AGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT-TTTGAAGTT 281735 ||||| | ||| | ||| | || || || || | || | || || |||| Sbjct 36214 CAAAGTTTCAATACCTAAAGATAAGGGTGTAACGTCGAGTAACAAAAGATCCTTGA---- 36269 Query 281736 TTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 281795 |||| || || ||| || | | ||||| |||||||| || ||||||||||| Sbjct 36270 TTTC-TCCCTT----CAA----AACACCAGCTTGTATAGCAGCTCCCATTGCAACAGCTT 36320 Query 281796 CATCAGGATTAAC 281808 | ||||| ||||| Sbjct 36321 CGTCAGGGTTAAC 36333 Score = 96.9 bits (106), Expect = 3e-14 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 86119 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 86178 |||||||||||||||||||| ||||| |||||||| ||| | |||| ||| || || Sbjct 36872 CCGTATGCAAGAGCTGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAGCCTGCT 36931 Query 86179 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 86238 || ||| ||| ||||||||| | ||| | |||||||| || ||||| |||||| Sbjct 36932 ATAGAGCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTA 36991 Query 86239 ATAACTGC 86246 ||||| || Sbjct 36992 ATAACAGC 36999 Score = 93.3 bits (102), Expect = 3e-13 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 || || |||| ||| || || ||||| |||||||| ||||| ||||| | || || Sbjct 36872 CCGTATGCAAGAGCTGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAGCCTGCT 36931 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463 || || ||||| ||||| ||||| | || ||||| ||||| || || || |||||| Sbjct 36932 ATAGAGCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTA 36991 Query 282464 ATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTT 282519 ||||| |||| |||| | | |||| ||||| || |||| ||||||||| Sbjct 36992 ATAACAGCATGCTTTACACTTCTACCAAGATAAGTTTCGGCAGTTTCTTTCATTTT 37047 >seq221 Length=9066 Score = 114 bits (126), Expect = 1e-19 Identities = 334/503 (66%), Gaps = 16/503 (3%) Strand=Plus/Plus Query 401131 TATTATGATTTCATTCACAAAGAACTTATTACTTTTTCTGTGGATGACGTTCT--TAGAT 401188 |||| |||||| ||||| ||||||||| | || || || ||| | || ||||| Sbjct 1584 TATTTTGATTTTATTCATAAAGAACTTGTA--TTATTTAGTAGATATGATACTACTAGAT 1641 Query 401189 CTGTTCCTAATTTAATGGATGGATTTAAACCATCACATCGCAAAGTATTTTATGGTTCTG 401248 || |||| |||||| | ||||| || ||||| ||| | |||||| ||| || | Sbjct 1642 CTATTCCAAATTTATTAGATGGTTTAAAACCTGGACAAAGAAAAGTACTTTTTGCAACAT 1701 Query 401249 TTGAAAAGAATATTTATAAGCAAGAGATTAAAGTATCAGATTTGACTGGTTTTGTCTC-G 401307 || |||| || || |||| || ||||||| || | || |||||| ||| | | Sbjct 1702 TTAAAAA-AAGCTTAATAATGAAC---TTAAAGTTGCACAATTAGCTGGTTATGTTGCTG 1757 Query 401308 AATATGACGAAATATCATCATGGTGATCAATCATTATCATCAACTATTGTCGGAATGGCT 401367 || || | ||||||||||| || ||||||| | |||||||| |||||| Sbjct 1758 AACATAGTGCT-TATCATCATGGAGAATCATCATTACAAAGTACTATTGTTAATATGGCT 1816 Query 401368 CAAAATTATGTGGGAAGTAACAATCTCAATTTGTTAATGCCATTGGGAATGTTTGGATCT 401427 ||||||| ||| |||||||| ||||| ||| ||||| |||| || ||||| | Sbjct 1817 CAAAATTTTGTTGGAAGTAATAATCTAAATCTGTTAGAACCATGTGGTCAATTTGGTAGT 1876 Query 401428 AGATTGACCGGAGGTAAAGATTCAGCGAGTCCTAGGTATTTGAACACTAAATTAGATGAT 401487 ||| || || |||||| || | || | ||| | ||||| || | | Sbjct 1877 AGAAAAGAAGGTGGAAAAGATGCAAGTGCTGCTCGTTATATATTTACTAAGCTATCTAAA 1936 Query 401488 TTGGCAAAGAAAATCTTCATTGATTATGATTTTGATATTCTTCAACATCAGTCAGAAGAT 401547 | | | | | || ||| || |||| | | || || ||| | | | | | ||| Sbjct 1937 TGGACTAGATATATTTTCCCAGAGGCTGATGATCCT-TTATT-AAC-TTATTTATATGAT 1993 Query 401548 AATTG---TCGAATTGAACCTGTTTATTATGCTCCTATTATTCCAATGATACTTGTAAAT 401604 || | | |||||||||| | ||||||| ||| || ||||||||||| | |||||| Sbjct 1994 GATGGACAACAAATTGAACCTTTATATTATGTTCCAATAATTCCAATGATTTTGGTAAAT 2053 Query 401605 GGAGCTGAAGGAATTGGTACTGG 401627 || |||| ||||||||||| || Sbjct 2054 GGTACTGATGGAATTGGTACAGG 2076 >seq5 Length=122375 Score = 102 bits (112), Expect = 6e-16 Identities = 269/403 (67%), Gaps = 22/403 (5%) Strand=Plus/Plus Query 68852 TTGTCGCCTACCATTTGTTTCAATCTCTGATAATATGTCGGACCAATAAAAATTTTA-AC 68910 || ||| | ||||| ||||| | ||||||||| || || || |||||||| ||| | || Sbjct 63755 TTATCGTCAACCATATGTTTTAGTCTCTGATAGTAAGTTGGCCCAATAAAGATTCTCGAC 63814 Query 68911 TGGTAATTTTTTACCATTCATTCCATTATACATAGTTTCATTACCCCATTCTTCATAACC 68970 | ||| | || || | ||||| ||||| |||||| || ||| ||| || | Sbjct 63815 TCC-AATCTCTTTCCCGTATGGCCATTGTACATTACTTCATTTCC--ATTTTTCTGAAAC 63871 Query 68971 AGCAGCAACTAATTCATCGT-TA---ATGGCATTAAGATCAACACTTGTAAATGGTGTTG 69026 | | ||||| | | || || || | | || || | ||||| || |||| Sbjct 63872 --CCGGAACTATGTAAACGGCTAGATATCTCTTCAACTGTAATTTTCGTAAAAGGAGTTG 63929 Query 69027 CATCGCCATACACTCCTTTAACTGCACATAGTTTTCCTAATAAACATTCAATAAGTTGCC 69086 ||||||| | || ||||| || ||| || ||| || | || ||||||||| | || | Sbjct 63930 CATCGCCCTCCAATCCTTGAATTGCGCACGCTTTGCCAAGTAGACATTCAATTAAATGGC 63989 Query 69087 CAATAGTCATACGTTTGGGCATACAATTAGGATTGATAATAATATCGGGAATTAATCCAG 69146 |||| |||||||| || ||| || |||||| |||||||| || ||||| | ||| Sbjct 63990 CAATTGTCATACGCGAAGGAATAGCATGAGGATTCATAATAATGTCTGGAATAATCCCAT 64049 Query 69147 ATTTACTGAATAACATATCTGCTCGATGAGCTTTGTAT------CCAATGGTACCTTTTT 69200 || | ||| |||||| ||| || | ||||| || || ||||| |||| Sbjct 64050 CTTGTGTAAATGGCATATC--CTC----AGTTCTGTATGTTATACCGATTGTACCCTTTT 64103 Query 69201 GACCTGCTCTTGACGAAAATTTATCACCTACATTGGGAATTCT 69243 | || ||| || | ||| ||||| || |||| || ||||| Sbjct 64104 GGCCATGTCTAGATGCAAACTTATCTCCAACATGAGGTATTCT 64146 >seq783 Length=538 Score = 96.9 bits (106), Expect = 3e-14 Identities = 222/338 (66%), Gaps = 30/338 (9%) Strand=Plus/Plus Query 399172 ATTACTTATGTACCTGGTCTATATAAAATTTATGATGAAGTAATTGTAAATGCGGCAGAT 399231 |||| ||||||||||||| ||||||| |||| ||||||| | | || ||||| || ||| Sbjct 141 ATTAATTATGTACCTGGTTTATATAAGATTTTTGATGAAATCTTAGTTAATGCTGCTGAT 200 Query 399232 CATAA--CAAGAGA-------------------------TGTCAAACATGTAATATTATC 399264 ||| | ||||| | | ||| ||||| | ||| Sbjct 201 GTTAAAGCTAGAGAAATTTCAACTAAAAATAATCATATTTTTGAAAAATGTACTTGTATT 260 Query 399265 AAAGTTGATATCGATCAA-AAAACAGGTCAAATTTCTGTTTGGAATAATGGTGATGGTAT 399323 |||||||| || || | |||| | | ||||| |||| | ||| |||| || || || Sbjct 261 AAAGTTGAAATTAATAGAGAAAAAAAG--AAATTACTGTATTTAATGATGGAGAAGGAAT 318 Query 399324 TGATGTAGCAATTCATAAAGAACATAATATATGGGTACCATCAATGATTTTTGGAGAACT 399383 | | ||| |||| ||||||| | ||| || ||| | | ||||||||| | | Sbjct 319 ACCAATTGAAATACATAGAGAACATCAAGTATATGTTCCAGAATTAATTTTTGGACATTT 378 Query 399384 TTTAACGTCTACTAATTACGATAAAAACGAGGAAAAAACTGTTGGTGGTAAAAATGGTTT 399443 ||||| ||| |||||| ||| | || || || | | | ||| || | ||||||||| Sbjct 379 ATTAACTTCTGATAATTATGATGATAATGAAGATAGAGTTACTGGAGGAAGAAATGGTTT 438 Query 399444 TGGCGCTAAGCTTGCTAATATTTATTCTGTTGAATTTA 399481 ||| || || ||| ||||||| | ||| ||||||| Sbjct 439 TGGAGCAAAACTTACTAATATATTCTCTAAAGAATTTA 476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740585919228756