Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001483535.1_202015-12- 30] 906 sequences; 8,691,536 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq382 87.8 2e-12 >seq382 Length=3575 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 59919 GCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGATGAGTCCTGGAGCATCATTTGCA 59978 || |||||| | |||||||||||||| | | ||||||| | ||| | ||| ||||| Sbjct 2132 GCTGTTAAAAAGAAAGCAGAATGGGCAACTAAATGGATGAATTCTGAACGATCTTTTGCT 2073 Query 59979 CAACGTCTCA-TAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTG 60036 || | | | | | || || ||| || |||||||| | || ||||| || |||| Sbjct 2072 GAAAGAATTATTGGATTCTG--TGCTGTTGAAGGAATTCTATTTTCTGGTAGCTTTTGTG 2015 Query 60037 CTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGA 60096 | ||||| ||||| ||||| ||||| || ||||| || || | || || || || || | Sbjct 2014 CAATTTTTTGGCTTAAAAAACGTGGACTTATGCCTGGACTCACATTTTCTAATGAACTTA 1955 Query 60097 TTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGC 60130 || || || || || |||||| || ||||| Sbjct 1954 TTAGTCGTGATGAAGGTCTCCATGCTGACTTTGC 1921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548518587956640