Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001593465.1_202016-03- 17] 119 sequences; 9,107,739 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq83 271 3e-67 seq102 181 4e-40 seq53 156 2e-32 seq88 152 2e-31 seq17 150 7e-31 seq98 145 3e-29 seq104 111 6e-19 seq116 87.8 7e-12 seq80 87.8 7e-12 >seq83 Length=179413 Score = 271 bits (300), Expect = 3e-67 Identities = 496/715 (69%), Gaps = 16/715 (2%) Strand=Plus/Plus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 ||| ||||| |||||| | || ||||| | |||||||| ||||| | ||| | | Sbjct 94837 AGCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAACGATAC 94896 Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTAC 451032 |||||| ||| | |||| || ||||| || || || || |||| ||| ||||| Sbjct 94897 TGTAGATATTGTTCCAAACGATCAAGGTAACCGTACAACACCATCATATGTAGCATTTAC 94956 Query 451033 GGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAA 451090 || | || | ||| | || | || || || ||||| || | |||| | || Sbjct 94957 TGAAACTGAGCGTCTTATTGGTGATGCAGCAAAGAATCAA--GTTGCTAGAAATCCAGAA 95014 Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150 |||||||| | ||||||||||||| | ||||| | | || ||||||| | | |||||| Sbjct 95015 AACACAGTTTTTGATGCTAAACGTCTTATTGGTAGAAAGTTTGATGATCAGGCAGTACAA 95074 Query 451151 AAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAA---TCAAAAAGGAAAGCCCTATATT 451207 | || | | || | | | | ||||| | || ||| | ||||| || | Sbjct 95075 AGTGATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGATAAGCCA-ATCAT 95133 Query 451208 CAA-GTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGT 451266 || ||||| || |||||||| || || | ||||||||||||| ||||||| Sbjct 95134 CAGTGTAAACTACTTAGGTGAAAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGT 95193 Query 451267 TCTTACTAAA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCC-AGTTACTGATGCA 451324 | |||| ||| ||||| |||| | ||| ||| |||| || || | ||| |||| Sbjct 95194 T-TTACAAAAGATGAAGGAAATCTCTGAAGCATA-CTTGGGTCGCCAAATTAAGAATGCT 95251 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 ||| |||||||||| |||||||||||||| ||||||| |||||||| || |||||||| Sbjct 95252 GTAGTTACTGTTCCAGCTTATTTCAATGACTCACAACGTCAAGCAACAAAGGATGCAGGT 95311 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 ||||||||||| ||||| | |||| ||||| || || || ||||||||| | || Sbjct 95312 GCAATTGCTGGTTTGAATGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTGCT 95371 Query 451445 TATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGT 451504 ||||| || | || |||| ||| | || | |||| | || | || ||||| ||| Sbjct 95372 TATGGTCTTGATAA---GAAAGGAACTGGCGAGAGAAATGTATTGATCTTCGATTTAGGT 95428 Query 451505 GGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCA 451564 || || ||| |||| || || | | ||||||||||| | |||||||| || || Sbjct 95429 GGTGGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTTAAAGCT 95488 Query 451565 ACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGAAT 451619 ||| |||||||||||| | || ||||||||| ||||||| | | ||||||| Sbjct 95489 ACCGCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAACAGACTCGTGGAAT 95543 >seq102 Length=1270815 Score = 181 bits (200), Expect = 4e-40 Identities = 458/690 (66%), Gaps = 15/690 (2%) Strand=Plus/Plus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 ||||| || ||| | || || || | ||||||||| ||| | ||| | ||||| | ||| Sbjct 81025 ATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAGAGTA 81084 Query 450977 GAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGAT 451036 || ||||| ||||||| ||||| || | ||| || |||| ||| || || ||| Sbjct 81085 GAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCACTGAT 81144 Query 451037 TCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAAAACA 451094 || ||| | | || || | || || ||||| | || |||| | | | | Sbjct 81145 GATGAGAGATTGATTGGTGAATCAGCCAAGAATCAA-GCTACTATCAA-TCCAGTTCAGA 81202 Query 451095 CAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAG 451154 | | | || | || | | ||||| ||| | | | |||||| |||| ||||| | Sbjct 81203 CTTTGTTCGACGTAAAGAGACTTATTGGTCGTCGTTTTAAGGATGATTCTGTCCAAAAGG 81262 Query 451155 AGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTAA 451214 | || | || || | ||||| | | || || | | ||||| || || ||||| Sbjct 81263 ATAAGACTTTGTTACCATATGAGATTATTAACAAAGATAGCAAGCCTTACATACAAGTTT 81322 Query 451215 ATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTA 451274 | ||| ||||| | || || || || ||||| |||| ||||||| ||| || Sbjct 81323 CTGTTAAGGGTGAGAAGAAGCAATTAGCCCCAGAAGAGGTTTCCGCTATGGT-CTTGCTC 81381 Query 451275 AA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 || |||||||||| || || ||| | ||| ||| | |||||||||||||| Sbjct 81382 AAGATGAAAGAAATTGCTGAGGCTTATCTCGGTAAGGAAGTAAAGCATGCAGTAATTACT 81441 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || || ||||| || |||||||| || || || || || || ||||| || ||||||| Sbjct 81442 GTCCCAGCTTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGTGCTATTGCT 81501 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTA 451453 ||||| ||||| | || ||||||||||| || |||||||| || | || | ||| | Sbjct 81502 GGTTTGAATGTAATCCGTATTATTAATGAGCCAACAGCAGCAGCAATTGCTTTTGGTTTG 81561 Query 451454 GGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACT 451513 | | ||||| || || || | |||||||||| ||||| ||||| || ||| Sbjct 81562 G-------ATAAGAA--AGCTGAGAAGAGCATTTTAGTATACGATTTGGGTGGTGGTACT 81612 Query 451514 CATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGT 451573 |||| |||| | | | ||||| | || || || || || || || | |||| Sbjct 81613 TTTGATGTTTCTCTCTTGACCATTGATAACGGCGTTTTCGAGGTCGTTGCTACAAGTGGT 81672 Query 451574 GATACTCATCTAGGAGGTGAAGATATTGAT 451603 ||||| ||| | |||||||| ||| | ||| Sbjct 81673 GATACCCATTTGGGAGGTGAGGATTTCGAT 81702 Score = 116 bits (128), Expect = 1e-20 Identities = 350/536 (65%), Gaps = 27/536 (5%) Strand=Plus/Plus Query 451895 GATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTT---- 451950 ||||| || || | ||||| |||||||| || || ||||| ||||||| || | Sbjct 81994 GATGAGATCGTTTTGGTAGGTGGTTCTACTCGTATCCCTAAGATTCAAGCCTTGATCAAG 82053 Query 451951 GTCTTCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAAT---CCTGATGAAGCTGT 452007 | ||||| || ||||| | | | || || | || | || |||||||| || Sbjct 82054 GAGTTCTT----TGATGGAAAGGAGCCA---AACAGAGGAATTAACCCAGATGAAGCCGT 82106 Query 452008 TGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGATGAAAAATTAGG 452067 || ||||||||||| || ||||| | ||| || ||||| || || | | | Sbjct 82107 CGCTTATGGTGCTGCCGTACAAGCTGGTATCTTAGCAGGTGAAG--GAGGTA-------G 82157 Query 452068 AGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAAT 452127 ||| | | ||| | ||||| || ||| || || | || |||| || | ||||||| | Sbjct 82158 TGATTTATTATTATTGGATGTTACTCCTTTAACTTTAGGTATTGAGACTGTTGGTGGAGT 82217 Query 452128 GATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAG 452187 ||||| || | ||| || ||| | |||| || ||||| ||| || || Sbjct 82218 TATGACAAAGCTCATTGGTAGAAACACTGTTGTTCCAACCAAGAAGAGCCAAGTTTTCAG 82277 Query 452188 TAC--AGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCA 452245 ||| | ||| ||||| || |||| |||| ||| || || | ||| || || ||| || Sbjct 82278 TACTTACCAA--GATAATCAGCCAGCTGTACTTATCCAGGTTTATGAGGGTGAGCGTCCA 82335 Query 452246 ATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCA 452305 ||||| ||||| || || ||| |||| ||||| || || || ||| Sbjct 82336 ATGACTAAGGATAACAACCTCCTCGGAAAATTCGAGCTTTCTGGAATCCCACCAGCTCCA 82395 Query 452306 AGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTG 452365 || || ||| |||||||| |||| | ||| ||||| | |||||||| | | || Sbjct 82396 AGAGGTGTTCCCCAAATTGAGGTTACTTTTGAAATTGATACTGATGGTATTTTACAAGTT 82455 Query 452366 AGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAA 452421 |||||| || || |||| ||||| || || ||||| || || |||||||| Sbjct 82456 AGTGCAAAGGATAAGGGTACTGGTAAATCCGAGAAGATTACTATCACAAATGATAA 82511 Score = 116 bits (128), Expect = 1e-20 Identities = 160/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || ||||| | || || || || || || | || |||||| | || Sbjct 544752 ATGCAAATTTTTGTCAAAACTTTAACAGGAAAGACCATCACATTGGAAGTTGAACCTTCC 544693 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | | || ||| || || |||||||| || ||||||||||||||| Sbjct 544692 GATACTATTGAGAATGTAAAGGCAAAGATCCAGGATAAGGAGGGCATTCCTCCTGATCAA 544633 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || || ||| | |||||||| |||||| | | || || ||| Sbjct 544632 CAGCGTCTGATCTTTGCTGGAAAGCAATTGGAAGATGGTAGAACTCTATCTGACTACAAT 544573 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || | || |||||||| ||||| ||||| Sbjct 544572 ATCCAGAAGGAGTCCACTTTGCATTTAGTATTGAGACTTAGAGG 544529 Score = 109 bits (120), Expect = 2e-18 Identities = 129/172 (75%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 412289 TTCCAAAACGACCACTTCTACCAATTCTATGTATAAAAGTTTCATGATTTTTAGGTAAAT 412348 ||||||| | |||||||| ||||||| ||| ||| | ||| | ||| |||||| || Sbjct 889681 TTCCAAATCTGCCACTTCTTCCAATTCGATGAATATATAATTCTTTATTAATAGGTAGAT 889622 Query 412349 CATAATTTATAACTAATTTAACCTCAGGAATATCTATCCCCCGTGCTAATAAATCAGTTG 412408 | || |||| |||||| || || | | | ||| || || | | | ||||||| |||| Sbjct 889621 CGTAGTTTACAACTAAATTGACTTGTTGTACATCAATACCTCTTCCCCATAAATCTGTTG 889562 Query 412409 TTAATAAAATTCGTGTTTTTCCCTCTCTAAATTCATCTACAATTTTACTTCT 412460 | | ||||| |||||||||||| |||||||| || ||| |||| || ||||| Sbjct 889561 TAATTAAAACTCGTGTTTTTCCTTCTCTAAACTC-TCT-CAATATTTCTTCT 889512 >seq53 Length=978 Score = 156 bits (172), Expect = 2e-32 Identities = 169/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||||||||| || |||| || || ||||| ||| | || |||||| | || Sbjct 505 ATGCAGATTTTCGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTCA 446 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | |||| ||| ||||| |||||||||||||| || ||||||||| Sbjct 445 GATACAATTGAGAATGTTAAGGCAAAGATTCAGGATAAGGAAGGAATCCCACCTGATCAA 386 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || |||| |||||| | || ||||| |||||| | | ||||| || Sbjct 385 CAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAAC 326 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || | |||||||| || ||||| ||||| Sbjct 325 ATTCAAAAAGAGTCCACTTTACACTTAGTCTTGAGACTTAGAGG 282 Score = 156 bits (172), Expect = 2e-32 Identities = 169/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||||||||| || |||| || || ||||| ||| | || |||||| | || Sbjct 961 ATGCAGATTTTCGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTCA 902 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | |||| ||| ||||| |||||||||||||| || ||||||||| Sbjct 901 GATACAATTGAGAATGTTAAGGCAAAGATTCAGGATAAGGAAGGAATCCCACCTGATCAA 842 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || |||| |||||| | || ||||| |||||| | | ||||| || Sbjct 841 CAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAAC 782 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || | |||||||| || ||||| ||||| Sbjct 781 ATTCAAAAAGAGTCCACTTTACACTTAGTCTTGAGACTTAGAGG 738 Score = 138 bits (152), Expect = 4e-27 Identities = 165/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || || || |||| || || ||||| ||| | || |||||| | || Sbjct 277 ATGCAGATTTTTGTCAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTCA 218 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | |||| ||| |||||||||||||| ||||| || ||||||||| Sbjct 217 GATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAGGGAATCCCACCTGATCAA 158 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || |||| |||||| | || ||||| |||||| | | || || || Sbjct 157 CAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGACTACAAC 98 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || | || |||||||| || || ||||| Sbjct 97 ATTCAAAAAGAGTCTACTTTACATTTAGTATTGAGGCTCAGAGG 54 Score = 138 bits (152), Expect = 4e-27 Identities = 165/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || || || |||| || || ||||| ||| | || |||||| | || Sbjct 733 ATGCAGATTTTTGTCAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTCA 674 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | |||| ||| |||||||||||||| ||||| || ||||||||| Sbjct 673 GATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAGGGAATCCCACCTGATCAA 614 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || |||| |||||| | || ||||| |||||| | | || || || Sbjct 613 CAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGACTACAAC 554 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || | || |||||||| || || ||||| Sbjct 553 ATTCAAAAAGAGTCTACTTTACATTTAGTATTGAGGCTCAGAGG 510 >seq88 Length=50168 Score = 152 bits (168), Expect = 2e-31 Identities = 168/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| ||||| || |||| || || ||||| ||| | || |||||| | || Sbjct 13572 ATGCAGATTTTTGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTCA 13631 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | |||| ||| ||||| |||||||||||||| || ||||||||| Sbjct 13632 GATACAATTGAGAATGTTAAGGCAAAGATTCAGGATAAGGAAGGAATCCCACCTGATCAA 13691 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || |||| |||||| | || ||||| |||||| | | ||||| || Sbjct 13692 CAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAAC 13751 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || | |||||||| || ||||| ||||| Sbjct 13752 ATTCAAAAAGAGTCCACTTTACACTTAGTCTTGAGACTTAGAGG 13795 >seq17 Length=61067 Score = 150 bits (166), Expect = 7e-31 Identities = 231/329 (70%), Gaps = 9/329 (3%) Strand=Plus/Plus Query 451274 AAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 |||||||||||||| || ||| ||| ||||| || | |||| || |||||| Sbjct 46785 AAAATGAAAGAAACTGCCGAAACTTATCTTGGTAGAAGTGTAAAGCATGCTGTTATTACT 46844 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || || ||||| || |||||| | || || ||||||||||| ||||| || ||| || Sbjct 46845 GTGCCAGCTTACTTTAATGATTCTCAGCGTCAAGCAACTAAGGATGCTGGCTCTATAGCA 46904 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTA 451453 || |||||||| |||| |||||||| || |||||||| ||||| ||||| ||| | Sbjct 46905 GGCTTAAATGTAACAAGAATCATTAATGAGCCAACAGCAGCAGCTCTTGCATACGGAAT- 46963 Query 451454 GGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACT 451513 ||||| || |||| | |||| || ||| | |||||| || ||||| ||| Sbjct 46964 GGAAA--------AAGCAGATGGCAAAACAATCGCAGTTTATGATTTGGGAGGAGGTACT 47015 Query 451514 CATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGT 451573 |||| |||| | | ||| | || || |||||||| || ||||| |||||| Sbjct 47016 TTCGATATTTCTATTTTAGAGATTCTTGGCGGAGTGTTTGAAGTTAAAGCAACTAATGGT 47075 Query 451574 GATACTCATCTAGGAGGTGAAGATATTGA 451602 | ||| |||||||| ||||| |||| Sbjct 47076 AACACTTCCCTAGGAGGAGAAGACTTTGA 47104 Score = 95.1 bits (104), Expect = 5e-14 Identities = 269/409 (66%), Gaps = 22/409 (5%) Strand=Plus/Plus Query 451988 GTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGT 452047 || || ||||| |||||||||||| || ||||| | ||||| | | || | | ||| Sbjct 47499 GTTAACCCTGACGAAGCTGTTGCAATGGGAGCTGCTATACAAGCTGGTGTTTTGA-AGG- 47556 Query 452048 TCAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGA 452107 || |||| | | ||| || ||||| | || || ||||| ||||| | || Sbjct 47557 ---------GAGAAATCAAG-GATCTTTTGTTACTCGACGTTACACCCTTATCTTTAGGT 47606 Query 452108 GTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGT 452167 ||||||| |||||| | | ||| |||||||| || || | || || | Sbjct 47607 ATTGAAACTTTGGGTGGAGTTTTTACTCGATTAATTAACAGAAATACCACAATACCCACT 47666 Query 452168 AAAAAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACC---AGGTGTAACTATTCAA 452224 |||||||| ||| ||| || || || || ||| | || || || || || Sbjct 47667 AAAAAGAGCCAAGTATTCTCCACTGCTGCAGACAATCAAACTCAAGTTGGAATTA---AA 47723 Query 452225 GTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTT--ACTC 452282 || || |||||||| | | | | | |||||||| || ||| ||||| | | Sbjct 47724 GTTTTCCAAGGAGAAAGAGAATTTGCTGCTGATAATAAGTTGCTTGGACAATTTGAAATG 47783 Query 452283 TTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTG 452342 | || ||||||| || || || ||||||||||||| | |||| |||| ||| Sbjct 47784 ATGGGAA--TTCCTCCAGCACCCAGAGGGGTTCCTCAAATTGAAGTCACCTTTGATATTG 47841 Query 452343 ATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAA 452391 |||||||||| ||| | ||||| ||||| |||| || ||| ||||||| Sbjct 47842 ATGCAAATGGAATTATGAATGTTGGTGCAATTGATAAGTCAACTGGAAA 47890 >seq98 Length=237136 Score = 145 bits (160), Expect = 3e-29 Identities = 300/443 (68%), Gaps = 9/443 (2%) Strand=Plus/Plus Query 364565 TATTCCATCTTTAGTTGATGGATTTAAACCTTCTCAAAGAAAAATTTTTTATGGAGCAAA 364624 ||||||| |||| | ||||| || |||||| ||||||||| | ||| || | || Sbjct 196937 TATTCCAAATTTATTAGATGGTTTAAAACCTGGACAAAGAAAAGTACTTTTTGCAACA-- 196994 Query 364625 TTTAAGAGGATTAGAAAAAGATCAAGTAAAAGTAGCTCAATTAGCAGGTTTTGTATCTGA 364684 ||||| | | || | || || | ||||| || |||||||| |||| ||| |||| Sbjct 196995 TTTAAAAAAAAGCTTAATA-ATGAACTTAAAGTTGCACAATTAGCTGGTTATGTTGCTGA 197053 Query 364685 CCGGGTAGCTTATCATCACGGTGAGGCAAGTTTAATGGGAGCAATAATTGGAATGGCACA 364744 | ||||||||||| || || || ||| | | || || ||||| || Sbjct 197054 ACATAGTGCTTATCATCATGGAGAATCATCATTACAAAGTACTATTGTTAATATGGCTCA 197113 Query 364745 AAATTTTGTTGGAAGTAATAATGTAAATTTACTAGAACCAAAAGGACAATTTGGAAGTCG 364804 |||||||||||||||||||||| ||||| | |||||||| || |||||||| ||| | Sbjct 197114 AAATTTTGTTGGAAGTAATAATCTAAATCTGTTAGAACCATGTGGTCAATTTGGTAGTAG 197173 Query 364805 AGTAATGGGAGGTAAAGATTC---TGCCAGCCCACGTTATATTTGGACCAAACTTGAAAA 364861 | | || || |||||| | ||| | |||||||| | || || || || Sbjct 197174 AAAAGAAGGTGGAAAAGATGCAAGTGC---TGCTCGTTATATATTTACTAAGCTATCTAA 197230 Query 364862 AGTGGCAGGATTAATATTTAGAAAAGAAGATAATCCAATTTTAAATTATATTAATGATGA 364921 | | | ||| || || | | | ||| |||| | |||| |||| | ||||||| Sbjct 197231 ATGGACTAGATATATTTTCCCAGAGGCTGATGATCCTTTATTAACTTATTTATATGATGA 197290 Query 364922 TGGATTAATGGTTGAACCTGAATTTTATCTTCCTATTATTCCTATGATTTTAGTAAATGG 364981 |||| | |||||||| || |||| |||| || ||||| |||||||| |||||||| Sbjct 197291 TGGACAACAAATTGAACCTTTATATTATGTTCCAATAATTCCAATGATTTTGGTAAATGG 197350 Query 364982 AGCAACAGGCATTGGTACTGGTT 365004 | || |||||||| |||| Sbjct 197351 TACTGATGGAATTGGTACAGGTT 197373 Score = 138 bits (152), Expect = 4e-27 Identities = 401/596 (67%), Gaps = 40/596 (7%) Strand=Plus/Plus Query 363744 GGAATTCCTAAACTAGAAGATGCTAATAAAGCAGGAACAAAAGATGCTCATAAATGTGGA 363803 ||||| || ||||| |||||||| || |||| || | || | | |||||| Sbjct 196128 GGAATCCCAAAACTTGAAGATGCAAACGAAGCTGGTGGACCCCATTCCAAAAAATGTACT 196187 Query 363804 -TTATATTTAGCAGAGGGAGATTCTGCTCT---TTCTATGATTCTGTCAGGGTTATCAAG 363859 ||||| ||| | || || ||||||||| |||| || ||| |||| ||||| | Sbjct 196188 CTTATACTTA-CTGAAGGTGATTCTGCTAAAACTTCT-TG--TCTTGCAGGATTATCTAT 196243 Query 363860 TAAAGATAGAAATTTTTATGGTGCCTTTCCGTTAAAAGGAAAATTATTAAATGTAAGAGA 363919 | | |||| | | || ||| | ||||| || || ||| | |||||||| ||||| Sbjct 196244 TGTTGGTAGAGACTATTTTGGAGTATTTCCACTACGTGGTAAACTTTTAAATGTTAGAGA 196303 Query 363920 AGCATCAGTTAAACAAATTATGGGAAATGATGAGATATCAAACCTTaaaaaaaTTTTAGG 363979 ||| ||| |||||||| || || |||| ||| ||| ||| || ||||| || || Sbjct 196304 AGCTTCATTTAAACAACAAATTGGTAATGTTGAAATACAAAATATTCTTAAAATATTGGG 196363 Query 363980 ATTACGTAATGAATTTAAATATGAAATGGATGAAGAATTTAATACTTTAAGATATGGAAA 364039 |||| ||| || | |||||||| | ||| | | | ||| ||||||||||| Sbjct 196364 ATTAGGTATTGGACAAAAATATGATA---ATGGACCAGTCAAT---TTAAGATATGGTTC 196417 Query 364040 AGTAATAATTTTATGTGATTCAGATGTAGATGGAAGTCATATTAAGGGACTAATTTTAAA 364099 |||| | | |||| |||| ||||| ||||||||||| ||||| ||| | || Sbjct 196418 TTTAATGCTAATGACTGATCAAGATCATGATGGTAGTCATATTAAAGGACTCATTATTAA 196477 Query 364100 TATGTTTCA-TAGTATGTGGCCTAATCT-TTTAAAAAGAGAAGGTT-TTATTACAACTAT 364156 | | | || || ||| ||||| | | | || | ||| | || ||| |||| | | Sbjct 196478 TTTAATACATTATTAT-TGGCCAAGTTTAATTCATTTTAGAGGATTCTTAAAACAA-TTT 196535 Query 364157 GAACACTCCAATTGTTAAAGCAACAAAAGGA---AAAGAAATATTAAAATTTTATAATTT 364213 | | ||||| ||||||||||| | ||||||| || ||||| | ||| | || ||| Sbjct 196536 GTA-ACTCCTATTGTTAAAGCTAAAAAAGGATCTAATGAAATTT---CATTCTTTACTTT 196591 Query 364214 AACTGATTATGATAATTGGAGAAATGATAAT------AATACAAAAGGATATTATATT-A 364266 | ||| ||||| | |||||||| ||||| || ||| |||| | ||| | Sbjct 196592 ATATGAATATGAACAATGGAGAAAGAATAATTCATCAAACTTAAATGGAT-GGAGATTCA 196650 Query 364267 AATATTACAAAGGATTAGGAACATCT---GATTCTAAAGAAGCTAAAGAATAtttt 364319 | ||||| ||||| ||||| |||||| || ||| ||| ||||||||||||| Sbjct 196651 AGTATTATAAAGGTTTAGGTACATCTACAGA-TCT--TGAATTTAAAGAATATTTT 196703 Score = 104 bits (114), Expect = 9e-17 Identities = 135/186 (73%), Gaps = 3/186 (2%) Strand=Plus/Minus Query 96115 TACTTTACTAATGTTTAATGCTGGGCTCCAGTTATTTTTTAAAATATCTAAACAAATTGC 96174 |||| | |||| |||| || || |||||| || |||||||||||| || ||||| || Sbjct 41184 TACTGTTCTAAGAGTTAAAGCAGGACTCCAGGCATCTTTTAAAATATCCAAGCAAATAGC 41125 Query 96175 ACCTGT---AGTACTAATATTTGGATGATAAATAGGAGTTTTAAATATAATTTTAGGAGG 96231 ||||| | || |||||| ||||| |||| || | ||| ||| ||| ||||| Sbjct 41124 TCCTGTTTGACTAGAAATATTCGGATGCCAAATTCTTGTGATGAATTTAACTTTTGGAGG 41065 Query 96232 CTTATATGGATAGTCTTCAGGAAAAGTAATTTCTAATTGGAATACTCCACCCTCATAGGG 96291 || |||||||| |||| || | | |||| || | ||| |||| || || ||||| || Sbjct 41064 CTCGTATGGATATTCTTTTGGTACAATAATATCAAGTTGAAATATACCTCCTTCATATGG 41005 Query 96292 TGTTCC 96297 |||||| Sbjct 41004 TGTTCC 40999 >seq104 Length=287446 Score = 111 bits (122), Expect = 6e-19 Identities = 129/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 248791 ATTTTCATTGGTCCTATGTTTTATTTGAGACTTAAACATATGGTACTTGATAAAGTTCAT 248850 ||||| |||| ||||| | ||| | | | ||||||||||| ||||||||| | ||| Sbjct 242533 ATTTTTGTTGGGCCTATTTATTACCAAAAATTGAAACATATGGTTCTTGATAAAATGCAT 242474 Query 248851 TCCAGAAGTATGGGTCCTAGACAAGCTATTACTAGACAACCCATGGAAGGACGTTCTAAA 248910 | ||| | | ||||||||||||| | |||| |||||||||| |||||| | ||||| Sbjct 242473 GCAAGAGGAAGGGGTCCTAGACAAATTCTTACCAGACAACCCACTGAAGGAAGATCTAAG 242414 Query 248911 GATGGAGGTCTTAAAATTGGAGAGATGGAAAAAGATGCAATGGTTGCTCATGGA 248964 |||||||| || |||| || ||||||| |||| | || ||| ||||| Sbjct 242413 GATGGAGGACTACGTCTTGGTGAAATGGAAAGAGATTGTTTAGTAGCTTATGGA 242360 >seq116 Length=321881 Score = 87.8 bits (96), Expect = 7e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 420714 ATCAATTCCTCTTCTTCCAGCTCGTCCTGCCATTTGAAGAAATTCATCAGTTCGTAAGAA 420773 ||||| ||||||||||| |||| || |||||||| || || ||| ||| || Sbjct 191681 ATCAAGGCCTCTTCTTCCTGCTCTACCACTCATTTGAATGAACTCTCCAG-AGTTAACAA 191739 Query 420774 TCTTCTACCACAAT-CATCATATTTAGATAATCCAGTAAATACAACAGTTTTTGTAGGCA 420832 | | ||| | | ||||| |||| | | |||||| | ||| ||||||| ||||| Sbjct 191740 TTCTGTACTCCTTTCCATCAAATTTTCTAAGTGAAGTAAAGATAACCGTTTTTGCAGGCA 191799 Query 420833 TATTTACACCAACAGAAAAAGTTTCAGTTGCTAACAAAACTTTAATTAAtttttttGAAT 420892 | || | || | ||||||||| || || | || | |||||||| ||| | | | Sbjct 191800 TGTTAATTCCCATAGAAAAAGTCTCTGTAGAGAATAGTACTTTAATAAATGACTCTCCAA 191859 Query 420893 AAAGAATTTCAACAATTTCTTTTAAAATAGGAATTATACCAGAATGATGA 420942 |||||| ||||| ||||| |||| || ||||| || ||| ||||||| Sbjct 191860 AAAGAAGCTCAACTATTTCCTTTACAACAGGAAGTAAACCTCCATGATGA 191909 >seq80 Length=240070 Score = 87.8 bits (96), Expect = 7e-12 Identities = 168/244 (69%), Gaps = 14/244 (6%) Strand=Plus/Plus Query 420706 CCAAATGTATCAATTCCTCTTCTTCCAGCTCGTCCTGCCATTTGAAGAAATTCATCAGTT 420765 ||||| |||||||| |||||||||||||||| ||||| |||||| | ||||| | Sbjct 163501 CCAAAAGTATCAATACCTCTTCTTCCAGCTCTTCCTGACATTTGTGTATATTCAGAA--- 163557 Query 420766 CGTAAGAA-TCTTCTA------CCACAATCATCATATTTAGATAATCCAGTAAATACAAC 420818 | ||||| | ||||| | | ||||| | |||| ||| | ||||||||||| Sbjct 163558 -GAAAGAAGTATTCTATTTTTTCTTCCATCATACTTTTTA-ATA--CTAGTAAATACAAT 163613 Query 420819 AGTTTTTGTAGGCATATTTACACCAACAGAAAAAGTTTCAGTTGCTAACAAAACTTTAAT 420878 || | | | || ||| | || | ||| | || |||||||| || || ||||| || Sbjct 163614 AGATCTAGCTGGACAATTAATTCCCATAGATATTGTCTCAGTTGCAAATAATACTTTGAT 163673 Query 420879 TAAtttttttGAATAAAGAATTTCAACAATTTCTTTTAAAATAGGAATTATACCAGAATG 420938 |||| | | | | | | || ||| |||||||| | ||| |||| || ||| ||| Sbjct 163674 TAATCCTCTAGTAAATAAGATCTCAGTCATTTCTTTGATAATTGGAAGCATTCCACTATG 163733 Query 420939 ATGA 420942 |||| Sbjct 163734 ATGA 163737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975715387646852