Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001593465.1_202016-03- 17] 119 sequences; 9,107,739 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq83 419 3e-112 seq101 217 2e-51 seq102 167 3e-36 seq98 159 4e-34 seq17 104 3e-17 seq107 96.9 4e-15 >seq83 Length=179413 Score = 419 bits (464), Expect = 3e-112 Identities = 1066/1603 (67%), Gaps = 38/1603 (2%) Strand=Plus/Minus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||| ||| | || || || || ||||| | ||||| |||||| || || || ||| Sbjct 96417 TCATCCTCACCCTTGTATTTCTCAGCATCATTAACCATACGTTCAATATCGTCCTTTGAT 96358 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 ||||| |||||||| || ||||| || ||||| | ||||| | | ||||| || Sbjct 96357 AATCTACCCTTATCGTTAGTAATAGTGATCTTGCTGCTCTTACCAGTGCTTTTATCAACA 96298 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 ||| ||||||||| |||||||| ||||||| ||| || | || | |||||||||| | Sbjct 96297 GCAGATACATTCAAGATACCATTAGCATCAATATCAAAAGTGACTTCAATTTGTGGTACA 96238 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || || ||||| | ||||||||| | || || | || || | | ||||||| | Sbjct 96237 CCTCTTGGTGCTGGTGGAATACCATCAAGATGGAACTTTCCGAGGAGATGGTTATCCTTA 96178 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATT--GTCACCGCAGGTTGATTATCTTGTG 6866 | | | | ||||| ||||| |||| || | |||||| || ||||| Sbjct 96177 GTCATGGCTCTCTCACCCTCATAAACTTGGATCAAGACACCGCTC--TGGTTATCAGCAT 96120 Query 6867 CCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGG 6926 || | ||||| |||| ||||| | ||| || || ||||| | ||||| | || Sbjct 96119 AAGTAGTGAAGACTTGTGTCTTCTTTGCTGGGATAGTTGTATTACGTTCAATAAGCTTGG 96060 Query 6927 TCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACA 6986 |||||| |||||| |||||| | || || || | || | || ||||| | ||| | Sbjct 96059 TCATAACACCACCAGCAGTTTCTAAACCGAGTGATAATGGAGCAACATCCAATAATAAGA 96000 Query 6987 GGTCTTGAACAG-ATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045 | || || || | | | | || |||| ||||||| || ||||| || | || || Sbjct 95999 GATCCTGTACGGCAGAGGATTGCT-CACCATTTAAGATAGCAGCTTGTACAGCAGCACCA 95941 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 || || || || ||||| || || || | ||| | |||||||||||||| | ||| Sbjct 95940 TAAGCAACAGCTTCATCTGGATTGATTGCTTTGCATGGCTCTTTACCGTTAAAGAATTCC 95881 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 | || |||| || || || ||||| || ||||| ||||| || | |||| Sbjct 95880 TGAATCAAGGCCTGAACCTTTGGAATACGTGTAGAACCACCAACCAATACAACATCATGT 95821 Query 7166 ACTTTCGAT---TTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACAT 7222 || ||| || || || | || ||| ||| || || || | | | | Sbjct 95820 ACA---GATCTCTTGTCCATACCAGCATCCTTGAGTACTTTCTCAACTGGAGCTAAAGTT 95764 Query 7223 TTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGA---TGTATAG 7279 |||||| | || || ||||| || || | || | | |||| || ||| Sbjct 95763 GCACGGAAGTAATCAGCGCAGAGTTCTTCGAATCTGGCTCTACTGATGGCAACTGAATA- 95705 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 ||||| || || || | ||||| | ||||| || | ||| | | || || || Sbjct 95704 --ATCAATACCCTCATAGAGTGAATCTAACTCAATTGTAGCTTGAGTAGAAGATGACAAA 95647 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 |||| |||||| |||||||| |||| | | | | || | | || | Sbjct 95646 GTTCTCTTTGCACGCTCACATTGAGTTCTGAGTCTTCTTAAAGCTCTAGCATTTGAAGTT 95587 Query 7400 ATATCTTT--CT-TATGTTTACGTTTAAACTCTT---CAGAGAAGTGTCGAAGGAGTCTC 7453 | ||| | || ||| || | || || |||| || |||| | | |||||| Sbjct 95586 AAATCCATACCTCTATTCTTTCTCTTGAAATCTTGTACACAGAATTCC---ACGAGTCTG 95530 Query 7454 GAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATA 7513 ||| |||||||||||||||||||| ||||| || ||||| ||||| |||||||| ||| Sbjct 95529 TTATCAAAATCTTCACCACCCAAGTGAGTATCACCAGCGGTAGCTTTAACTTCAAAAATA 95470 Query 7514 CCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGT 7573 || ||||||| |||| || || |||||||| ||||||||||| | || || || | | Sbjct 95469 CCATCTTCAATAGTTAATAATGATACATCAAAAGTACCACCACCTAAATCGAAGATCAAT 95410 Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 || || | ||| | | |||||||| ||||| || || ||||| || || ||||| Sbjct 95409 ACATTTCTCTCGCCAGTTCCTTTCTTATCAAGACCATAAGCAATAGCAGCTGCAGTTGGC 95350 Query 7634 TCATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTG 7692 || ||||| || | | ||| |||| |||||||| | | ||||| || || ||||| Sbjct 95349 TCGTTAATGATTCTCATTACA-TTCAAACCAGCAATTGCACCTGCATCCTTTGTTGCTTG 95291 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 ||||| || || || || || || || || || || || || | | | | || ||| Sbjct 95290 ACGTTGTGAGTCATTGAAATAAGCTGGAACAGTAACTACAGCATTCTTAATTTGGCGACC 95231 Query 7753 GAGATACGATTCCGCGATATCTTTCAT-TTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 | || | ||| | ||| || ||||| ||| |||| |||||| | ||||| ||||||| Sbjct 95230 CAAGTATGCTTCAGAGATTTCCTTCATCTTTTGTAA-AACCATAGCAGAAATTTCTTCAG 95172 Query 7812 CCGCAAACTGTTTCGTTTCACCGTTAA--AATCAACTTCAATCATGGGTTTATCCGCAGC 7869 | || | ||| ||||||| ||| | | || || || || |||||| | Sbjct 95171 CATGGAATTCCTTCTTTTCACC--TAAGTAGTTTACACTGATGATTGGCTTATCCTTTGG 95114 Query 7870 ACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAA 7929 ||| | || ||| | | ||| | ||||||| ||| || || || ||| Sbjct 95113 ACCTCTAACTACTTTAAATGGCCAGTGAGTCATATCACTTTGTACTGCCTGATCATCAAA 95054 Query 7930 CTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTG 7989 |||||| || |||||||| || ||||||||||||||||||| || || | || ||| Sbjct 95053 CTTTCTACCAATAAGACGTTTAGCATCAAAAACTGTGTTTTCTGGATTTCTAGCAACTTG 94994 Query 7990 GTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGG 8049 ||||| || || || || |||||||| || | |||| ||||| || || || ||||| Sbjct 94993 ATTCTTTGCTGCATCACCAATAAGACGCTC---AGTTTCAGTAAATGCTACATATGATGG 94937 Query 8050 GGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCC 8109 || || || || ||||| ||||| | || ||| ||||| |||||| ||| || || Sbjct 94936 TGTTGTACGGTTACCTTGATCGTTTGGAACAATATCTACAGTATCGTTTCTCCATACACC 94877 Query 8110 GACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGA 8152 || || || || || || |||||||||||||| || ||| || Sbjct 94876 AACACATGAGTATGTGGTACCTAAATCAATACCAATAGCTGGA 94834 >seq101 Length=510706 Score = 217 bits (240), Expect = 2e-51 Identities = 1162/1829 (64%), Gaps = 57/1829 (3%) Strand=Plus/Minus Query 104368 TAATACATACCCGTTTTTAAACCAGTTTTCCACGCGTACATGTGCATAGACGAAAGTTTT 104427 ||||| || || ||||||| ||| ||||||| | || | |||||||| || | ||| Sbjct 332245 TAATAAATGCCTGTTTTTAGACCTTTTTTCCAACCATAAAAATGCATAGATGATAACTTT 332186 Query 104428 GAAATTGTTGGACTCTCGACGAATAAGTTCATACTTTGACTTTGGTCTATATACACACCT 104487 | || | | | | || | | ||||| | ||| ||| | ||| ||| Sbjct 332185 GCAAAGTTAGCATTTTCCATATGGATGTTCAAAGATTGCGATTGACAAACATATGGACCC 332126 Query 104488 CTATCCGCCGCCATATCGATGATTGTTTTTTGACTCATTTCCCATACGGTTTTATACAAT 104547 ||||| || |||||||| || | ||| ||||| | ||||||||||| || ||||| | Sbjct 332125 CTATCTGCAGCCATATCAATTACTGTCTTTTGCTTGATTTCCCATACAGTCTTATAAAGC 332066 Query 104548 TCCTTAAGATCATCGGGTATATCAATAATGTTTTGAACAGACCCATTTGCCTTCACCATA 104607 || | ||| || || || || || ||||||| | ||||| || | ||| Sbjct 332065 TCACGTATATCCTCCGGAATTGTAAGTATATTTTGAATACTGCCATTA---TTTGCAATA 332009 Query 104608 AGATCTTTCATTT-CCTTCGA--CCAGAGTCCACGTTCTTTCAAATCGTTTACTAAATGT 104664 | || | | | ||| | ||| | ||| | ||| ||||| |||| || || Sbjct 332008 ATATTCTGCTTAAGCCTATCATCCCATAACCCAAGCTCTAGTAAATCATTTAGCAAGTGC 331949 Query 104665 TTGTTTACGACGACAAATTCACCCGCGAGTGTTCGTCTCAAATAGATATTGGTCGTATAC 104724 ||||| || | || ||||| | ||| | | ||| || || | || | Sbjct 331948 GGATTTACTACAAAGAACTCACCAGATAGTACCCTACGATGATAAATGTTCGAGGTGAAT 331889 Query 104725 GGTTCGAAACACTCGTTGTTCCCTAAAATCTGGGATGTGGATGCGGTAGGCATAGGTG-- 104782 || || |||| ||| ||||| |||||||| || || |||||||| || ||||| || | Sbjct 331888 GGCTCAAAACTCTCATTGTTACCTAAAATTTGTGAAGTGGATGCTGTTGGCATTGGAGAT 331829 Query 104783 --CAAGA-AGAAG-ACTATT--CATAGTTCCTT-TCTTAACAAGTTTACGCATGGCATTC 104835 ||| | |||| || | | |||| || || || | |||| || | || | Sbjct 331828 ATCAATAGAGAATTACGAATACCATATTTGGAAATCCTATC---TTTAAGC---GAATCC 331775 Query 104836 CAATCGTATCGACCACTAAACTTTGG-GT--CTCGATCCCACATATCGAATTGAAGAATA 104892 ||||| | | ||| | | ||| || ||| |||||||||| ||||| | |||| Sbjct 331774 CAATCACAAAGTCCAG---AGTCTGGTGTAACTC---CCCACATATCAAATTGTAAAATA 331721 Query 104893 CCTTTACTAAACGGTGACCCCTTAAACGTTTCATAAGGACCGTACATTTCGGCAAGTTCA 104952 || ||||| || || || | | ||||| || ||||| || |||| ||||| ||| Sbjct 331720 CCCTTACTCGCAGGCGAACCGGAATATGTTTCGTATGGACCATATTTTTCTGCAAGCTCA 331661 Query 104953 CACGACGATTCGAGTGATGCGTGGTAGATAGTTTCGAATATATCAATGTTGAGTTTTCTC 105012 || | ||||| | ||| | |||||| ||| || || | | || | || | Sbjct 331660 CAGCTAGCATCGAGAGCTGCATAATAGATAACTTCAAAGATTTGTTTATTTAACTTCTTA 331601 Query 105013 GATTCTTCTGAACCGAATGTCATTCTTAACATGAT-AAACACGTCAGCGAGACCCTGAAC 105071 | | | || || || ||| ||| | | ||| || ||||| ||| ||||| || |||| Sbjct 331600 GCTCCCTCAGACTCGTATGGCATACGAAGCATCATGAAACA-GTCTGCGAGCCCTTGAAT 331542 Query 105072 ACCAATACCGATGGGTCTGTGACGCATATTTGAACGTTTCCCGTT--TTCGGTTGGGTAA 105129 ||||| || | || | || | | ||| || |||| || ||| | | || Sbjct 331541 GCCAATCCCCAATGGACGATGTCTTAAATTCGA--GTTT---GTACATTCTTTAAGAGAA 331487 Query 105130 AAGTTTTTA---TCAATAACCTTGTTTAAGTTACGTGTAACCATTTTCGTAACACGATGT 105186 | | | | ||||| | || || || || | |||| || |||||||| | | Sbjct 331486 TAATATCCAACGTCAATCAATTTATTCAAATTCCTCGTAATCACCTTCGTAACTTCTTTT 331427 Query 105187 AACTCTTCATGGTTAAACTCGTTCTTCTCGACATCAACGTATTTTGGTAACGCGATTGAT 105246 |||| ||| | |||| || || | ||||||| | ||||| | | || || Sbjct 331426 AACTTATCAAAATCAAACGTCTTGTTATTTTTATCAACGAACTTTGGAAGGCCAATAGAC 331367 Query 105247 GCGAGATTACATACGGCGGTTTCTTCCTTATCCGTAAACTCCAGAATTTCTGTACACAAA 105306 || |||||||| ||||| ||| ||||| || | || | |||||||| || || Sbjct 331366 GCCAGATTACAAACGGCAACTTCGTCCTTGCTAGTGTATTCTATGATTTCTGTGCATAAG 331307 Query 105307 TTTGATGATTTAATCGTACCAACGTGTTTATGGTTCGACTTTTC--ATTACACGCGTCTT 105364 || ||| ||| || || | | ||| ||||| |||||| ||| || |||| Sbjct 331306 TTACTTGAAACAATAGTTCCCAAATTTTTCTGGTT--ACTTTTGCTATTTGCAGCATCTT 331249 Query 105365 TGTAAAGCATATATGGGGTTCCCGTTTCACTTTGGGATTTAATAATTGCTTTCCAAATCT 105424 | ||| ||| |||| || ||||| ||| |||| | | | ||| ||||| | Sbjct 331248 TATAACAAATAAATGGTGTCCCCGTCTCAATTTGAGCCTGTAAGATTAAGAACCAAAGTT 331189 Query 105425 CCGAAGCTGGTACAAC--TTTAGTTGCGATACCTTCAGATTCGTATTTCTCGTAAAGATC 105482 | ||| | || | ||| || | |||| || || | || || || | Sbjct 331188 TCTGCGCT--TTCATCGTTTTCCTTCCACGGCCTTGTTTCTCATACTCTTCATATAGCTT 331131 Query 105483 TTCAAACTCTTTACCGTACACGTCT-GAAAGACCCTTTGCCTG-ATCAGGACAAAACAAT 105540 | ||| || | || | || ||| | || |||| || | ||| || || | | Sbjct 331130 CTTAAAATCATCGCCCCAAACATCTTGCAATCCCCT--GCATTCATCTGGGCACATTAGA 331073 Query 105541 GACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAA 105600 | ||||| ||| ||||| | || |||||||| ||| |||| ||| | ||| | | Sbjct 331072 GTCCAATCTTGATCCTTCTCAACTCTTTCCATGAACAGATCAGGAACCCAAAGGGCAGGA 331013 Query 105601 AAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCG 105660 ||||| || ||||| ||| |||||| | || |||||| | |||||| | ||| || Sbjct 331012 AAGAGATCGCGACATCTCATCTCTTCCTTTCCATGATTCTTCCTAATTTCAATAAACTCT 330953 Query 105661 AGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCTTTACG---ACGCCCC 105717 | || ||| ||||||||||||| ||||| | |||||| | |||||||| | || Sbjct 330952 ACAACATCAACGTGCCATGGTTCCAAATAAATTGCAATGGCACCTTTACGCTTCCCTCCA 330893 Query 105718 GCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCG 105777 |||||| | ||| || || || ||||| || || | ||| ||||| | |||| Sbjct 330892 CCTTGATCAATATACCTAGCAGTGTCATTATAAACGCGCAGCATCGGAATTAATCCATTA 330833 Query 105778 GATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAAC 105837 ||| | ||||||||||| ||||||| ||| | || | | | || || | | Sbjct 330832 GATCTCCCATTTGTTCCTCGAATATATGAACCAGTTCCTCTAATATTACTTACTGCCACC 330773 Query 105838 CCAATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCG 105897 |||| || || || |||||| || || || | ||| ||| || | |||||| Sbjct 330772 CCAAGGCCACCTGCAGTCTTACTAATGTTTGCGCATTTAGTTAGTGTGTCAAAGATACCG 330713 Query 105898 TCGATACTATCTTCCTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTGGGTGTA 105957 | || |||||| | || | | ||||| ||||||||||| |||| || || Sbjct 330712 TTTATTGAATCTTCTGGAATCCTGAGTAAAAAACAAGATGACATTTGAGGTCGCGGCGTG 330653 Query 105958 CCAGCATTGAACAGAGTTGGTGTTGCATGAATGAACAAACCTTTCGATAACGCTTCGTAT 106017 || | ||| || || || |||||||||||| | || | || ||||||| || ||| Sbjct 330652 CCTGAATTAAAGAGTGTGGGTGTTGCATGAGTAAAATATTTTTGCGATAACAACTCATAT 330593 Query 106018 GTTTCCAGGACGTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCATATAGAGA 106077 ||||| || | |||||||| | |||||||||| || || ||||| ||| Sbjct 330592 GTTTCAAGTGCAGCTTCAATATCACCACAATGAATACCACAAGAAACCCGCATCAGAAGA 330533 Query 106078 TATTGGGGTGTTTCAATAATTTCACCGTCAATTTTCTGGAGATACCCTTTTTCAAGTGTT 106137 | ||| ||| |||| | || || ||||||||| | ||||| | |||| || ||| Sbjct 330532 TGTTGTGGTCTTTCCACAACTTTGTTGTCAATTTTAAGAAGATAGGATCTTTCTAGAGTT 330473 Query 106138 TTTAAACCAAAATACCCAAACTCAAAATC 106166 || || ||||||| || | |||||||| Sbjct 330472 TTGAAGGCAAAATAATCATATTCAAAATC 330444 >seq102 Length=1270815 Score = 167 bits (184), Expect = 3e-36 Identities = 280/400 (70%), Gaps = 10/400 (3%) Strand=Plus/Minus Query 7450 TCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAA 7509 |||| ||||||||| ||||| ||||| || ||||| || || || ||| || || Sbjct 81708 TCTCTGATCGAAATCCTCACCTCCCAAATGGGTATCACCACTTGTAGCAACGACCTCGAA 81649 Query 7510 GATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAAT 7569 | || |||||| | || | ||||||||||| ||||||||||||| || | | Sbjct 81648 AACGCCGTTATCAATGGTCAAGAGAGAAACATCAAAAGTACCACCACCCAAATCGTATAC 81589 Query 7570 GAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGT 7629 | | | || | || | | ||||||| | ||| | || || || || || || Sbjct 81588 TAAAATGCTCTTCTCAGCTT------TCTTATCCAAACCAAAAGCAATTGCTGCTGCTGT 81535 Query 7630 TGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCG 7688 ||| |||||||||||||| | ||| |||| |||||||||| | ||||| || || | Sbjct 81534 TGGCTCATTAATAATACGGATTACA-TTCAAACCAGCAATAGCACCAGCATCCTTGGTAG 81476 Query 7689 CTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCT 7748 | || || || | ||| |||||||| || ||||| || | || || | | | |||| || Sbjct 81475 CCTGACGCTGAGCATCATTAAAGTAAGCTGGGACAGTAATTACTGCATGCTTTACTTCCT 81416 Query 7749 TACCGAGATACGATTCCGCGATATCTTTCATTTTG-GTAAGAACCATCGATGAAATCTCT 7807 |||||||||| | || || || |||||||| ||| | ||| ||||| | |||| |||| Sbjct 81415 TACCGAGATAAGCCTCAGCAATTTCTTTCATCTTGAGCAAG-ACCATAGCGGAAACCTCT 81357 Query 7808 TCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTT 7847 || | || || || ||| | ||||| |||| | ||||| Sbjct 81356 TCTGGGGCTAATTGCTTCTTCTCACCCTTAACAGAAACTT 81317 Score = 165 bits (182), Expect = 1e-35 Identities = 381/572 (67%), Gaps = 9/572 (2%) Strand=Plus/Minus Query 6611 TCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTA 6670 || |||||||| | || | ||| ||||||||||| || || |||||||| ||||||||| Sbjct 82538 TCTATGTCTTCCTGTGAGAGTCTACCCTTATCATTTGTGATAGTAATCTTCTCGGATTTA 82479 Query 6671 CCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTT 6730 || | ||||||| | ||||| || | |||||||||| | ||||| || || | Sbjct 82478 CCAGTACCCTTATCCTTTGCACTAACTTGTAAAATACCATCAGTATCAATTTCAAAAGTA 82419 Query 6731 ACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCA 6790 || | |||||| || ||| || || || | ||| || || | | || ||| | || Sbjct 82418 ACCTCAATTTGGGGAACACCTCTTGGAGCTGGTGGGATTCCAGAAAGCTCGAATTTTCCG 82359 Query 6791 AGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCA 6850 || | |||||||| | | | | ||| ||||| ||||| || | || || || Sbjct 82358 AGGAGGTTGTTATCCTTAGTCATTGGACGCTCACCCTCATAAACCTGGATAAGTACAGCT 82299 Query 6851 GGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTT 6910 || ||||||||||| || ||| | ||| ||||| | ||||| || ||| Sbjct 82298 GGCTGATTATCTTGGTAAGTACTGAAAACTTGGCTCTTCTTGGTTGGAACAACAGTGTTT 82239 Query 6911 CTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTC 6970 || ||| | | ||||||| ||||| | ||| || | || | || | ||| || Sbjct 82238 CTACCAATGAGCTTTGTCATAACTCCACCAACAGTCTCAATACCTAAAGTTAAAGGAGTA 82179 Query 6971 ACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCT 7030 || ||||| | ||| | || || | | | |||||||| | |||||| | ||| Sbjct 82178 ACATCCAATAATAATAAATC----AC---TACCT--CCTTCACCTGCTAAGATACCAGCT 82128 Query 7031 TGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTA 7090 || || | || || || ||||| || ||||| |||||||| | | || | || || Sbjct 82127 TGTACGGCAGCACCATAAGCGACGGCTTCATCTGGGTTAATTCCTCTGTTTGGCTCCTTT 82068 Query 7091 CCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACC 7150 || | ||| | ||| | || |||||| || ||||| || || || ||||| ||| Sbjct 82067 CCATCAAAGAACTCCTTGATCAAGGCTTGAATCTTAGGGATACGAGTAGAACCACCTACC 82008 Query 7151 AAAACGATTTCATTCACTTTCGATTTATCGAT 7182 |||||||| |||| |||| || || | ||| Sbjct 82007 AAAACGATCTCATCTACTTCAGACTTTTTGAT 81976 >seq98 Length=237136 Score = 159 bits (176), Expect = 4e-34 Identities = 337/499 (68%), Gaps = 9/499 (2%) Strand=Plus/Minus Query 183161 CCGGTACCAATACCTTCAGTTCCATTTACCAAAACGGTCGGTAATATAGGAACATAATAG 183220 || |||||||| || ||||| ||||||||||||| | || | ||| ||||||||||| Sbjct 197371 CCTGTACCAATTCCATCAGTACCATTTACCAAAATCATTGGAATTATTGGAACATAATAT 197312 Query 183221 TCAGGTTCGATTTGTTTACCGTCGTCGTCGAGATAGTTTAATACTGGATCATC----TTT 183276 |||||| ||||||| || || || | | ||| |||||| |||||||| | | Sbjct 197311 AAAGGTTCAATTTGTTGTCCATCATCATATAAATAAGTTAATAAAGGATCATCAGCCTCT 197252 Query 183277 GGGATCAAAAAGTATTCTCGCGTTTTTAGTCAATTTTGTAAATATATACCTGGTTTGACT 183336 |||| ||| ||| || | ||||| | || ||||||||||| | | ||| Sbjct 197251 GGGA---AAATATAT-CTAGTCCATTTAGATAGCTTAGTAAATATATAACGAGCAGCACT 197196 Query 183337 CGCGTCTTTACCACCCATGAGACGTGTACCAAATTGACCACATGGTTCGAGTAAATTAAT 183396 || ||||| ||||| | |||||||||||||||||||||| | | ||| | Sbjct 197195 TGCATCTTTTCCACCTTCTTTTCTACTACCAAATTGACCACATGGTTCTAACAGATTTAG 197136 Query 183397 ATTATTCGACCCCGTAAAATTATGTGCTAATTTTACAATTGTATCTGCCAAAGAGACTTC 183456 |||||| || |||||| || || | || ||||| ||| | || || ||| Sbjct 197135 ATTATTACTTCCAACAAAATTTTGAGCCATATTAACAATAGTACTTTGTAATGATGATTC 197076 Query 183457 ACCGTGGTGATACGATGTTTTTTCCGAAACGTATGCGGCTAATTGCGCAACCTTCATTTC 183516 || || ||||| | | | ||| | ||| || | |||||||| ||||| || | ||| Sbjct 197075 TCCATGATGATAAGCACTATGTTCAGCAACATAACCAGCTAATTGTGCAACTTTAAGTTC 197016 Query 183517 AGATGTAAGATTCTTTGTGAAACACGCGTATAACACTTTTCGTTGGGATGGTTTTAAACC 183576 | |||| || ||| | || || | | ||||||| ||| ||||||||||| Sbjct 197015 ATTATTAAGCTTTTTTTTAAATGTTGCAAAAAGTACTTTTCTTTGTCCAGGTTTTAAACC 196956 Query 183577 ATCTGAAACGTGTGCAATCGACCTTTTCAAATCAGCAAGACTGAAATTTACAAGATCTTT 183636 |||| | | | || ||| || || | |||| ||| || |||||| ||||| Sbjct 196955 ATCTAATAAATTTGGAATAGATCTAGTAGTATCATATCTACTAAATAATACAAGTTCTTT 196896 Query 183637 ATGAATAAAATCAGAAATA 183655 ||||||||||||| ||||| Sbjct 196895 ATGAATAAAATCA-AAATA 196878 >seq17 Length=61067 Score = 104 bits (114), Expect = 3e-17 Identities = 209/303 (69%), Gaps = 13/303 (4%) Strand=Plus/Minus Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 |||| ||||||| ||| ||||||||||||| ||| || | || | |||||| | | | Sbjct 47869 GCACCAACATTCATAATTCCATTTGCATCAATATCAAAGGTGACTTCAATTTGAG--GAA 47812 Query 6749 CCCCTC--GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCG 6806 |||||| ||||| | ||||| ||| | | |||||| ||||| || | ||||| | Sbjct 47811 CCCCTCTGGGTGCTGGAGGAATTCCCATCATTTCAAATTGTCCAAGCAACTTATTATCAG 47752 Query 6807 TCGC--CTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTG 6864 || |||| | ||| |||| | ||||||||| || || |||||| ||| Sbjct 47751 CAGCAAATTCT--CTTTCTCCTTGGAAAACTTTAATTCCAACTTGAGTTTGATTGTCTGC 47694 Query 6865 TGCCGTTGAGAAGA-TTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCG 6923 || || ||||| | || | ||||| |||| || || || |||||||| ||| | Sbjct 47693 AGCAGTGGAGAATACTTGGCTCTTT-TTAGTGGGTATTGTGGTATTTCTGTTAATTAATC 47635 Query 6924 GGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTA 6983 | || | || ||||||| |||||| | || | ||| | ||||| ||||| ||||| Sbjct 47634 GAGTAAAAACTCCACCCAAAGTTTCAATACCTAAAGATAAGGGTGTAACGTC---GAGTA 47578 Query 6984 ACA 6986 ||| Sbjct 47577 ACA 47575 Score = 86.0 bits (94), Expect = 8e-12 Identities = 197/291 (68%), Gaps = 8/291 (3%) Strand=Plus/Minus Query 7493 GTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCA 7552 || ||||| |||||||| | || || ||| | ||| | |||| ||| || ||||| Sbjct 47068 GTTGCTTTAACTTCAAACACTCCGCCAAGAATCTCTAAAATAGAAATATCGAAAGTACCT 47009 Query 7553 CCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTAC 7612 || |||| ||| ||| | || | || | | | ||| | | || || | ||||| Sbjct 47008 CCTCCCAAATCATAAAC---TGCGATTGTTTTGCCATCT--GCTTTT-TCCATTCCGTAT 46955 Query 7613 GCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGT 7671 || | ||| || || ||||| |||||||| || | ||| || || || || |||| Sbjct 46954 GCAAGAGCTGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAG-CCTGCTATAGA 46896 Query 7672 TGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGAC 7731 | ||||| || || ||||| || || ||||| |||||||| || || || || | || Sbjct 46895 GCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTAATAAC 46836 Query 7732 CGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTT 7782 || | | | || | |||| ||||| | ||| || | ||||||||||| Sbjct 46835 AGCATGCTTTACACTTCTACCAAGATAAGTTTCGGCAGTTTCTTTCATTTT 46785 >seq107 Length=246113 Score = 96.9 bits (106), Expect = 4e-15 Identities = 280/420 (67%), Gaps = 27/420 (6%) Strand=Plus/Minus Query 11280 ATCAAATCTACCGGGGCGTAATAACGCATCGTCGAGTATATCGATACGGTTTGTTGCACC 11339 ||||||||| || || ||| ||| ||| || | || ||| ||| |||||| | | Sbjct 30609 ATCAAATCTTCCTGGACGTGTTAATGCAGGATCTAATACATCAGAACGATTTGTTCCTGC 30550 Query 11340 TATAACAACAATTTCAGTTTCATTCTCGAAA-CCATCCATTTCTGTTAATAAT-TGGTTA 11397 || ||| | | | || | | ||| ||| |||||||||||| || ||| || ||| Sbjct 30549 TAAAACTATTACTCCATTATT-TTCAGTAAATCCATCCATTTCTAC-AAGAATCTGATTA 30492 Query 11398 ATTGTTTGTTCACGCTCATCGTTTG------CCGCAAACCCATTCATACTTCT------T 11445 | || ||| | |||||| || | | ||||| ||| | ||| | | Sbjct 30491 AGAGTGCTTTCTCTCTCATCATTAGATGAAGCAGCAAATCCACCCC--CTTTTGCACGCT 30434 Query 11446 TTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACG--GTTGATTTTCACGTG 11503 ||||| |||| |||||||||||||| ||||| | ||||| | | | ||||| | || Sbjct 30433 TTCTT-CCAACTGCATCAATTTCATCAATAAAAACAATACTTGGAGATAATTTT--CTTG 30377 Query 11504 CCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACG 11563 || | ||||| || | ||||| |||| || | || ||||| || |||| || Sbjct 30376 CCTGTGAAAATAATTCTCTTACTCTACTTGCACCCATTCCAACAAAAATCTCAATAAA-- 30319 Query 11564 ATGAC--CCCGAACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAA 11621 || || || || | || ||| || || || |||||| || | ||| |||||| Sbjct 30318 ATCACTTCCAGATATATAAAAAAATGGTACATTAGCTTCACCAGCAACAGCTTTTGCTAA 30259 Query 11622 AAGTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCACC 11681 | ||||||||| ||||||||| ||| ||||| ||||| |||||||||| ||||| Sbjct 30258 TAATGTTTTACCGGTACCTGGTGGTCCTACCAATAAAGCACCTTTTGGTATTTTTGCACC 30199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131855239960