Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001593465.1_202016-03-
17] 119 sequences; 9,107,739 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq101 345 6e-90
>seq101
Length=510706
Score = 345 bits (382), Expect = 6e-90
Identities = 1175/1811 (65%), Gaps = 26/1811 (1%)
Strand=Plus/Minus
Query 76820 ATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTG-TCAGTT 76878
||| || || || ||||||||||| |||| || || |||||||| || | | ||
Sbjct 332246 ATAATAAATGCCTGTTTTTAGACCTTTTTTCCAACCATAAAAATGCATAGATGATAACTT 332187
Query 76879 TGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTC 76938
|| || | ||| || | ||||| || |||| || || |||| | | | |
Sbjct 332186 TGCAA-AGTTAGCATTTTCCATATGGATGTTCAAAGATTGCGATTGACAAACATATGGAC 332128
Query 76939 CTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAA 76998
| ||||| || ||||| | || | |||||||| |||||||| | ||| || |||
Sbjct 332127 CCCTATCTGCAGCCATATCAATTACTGTCTTTTGCTTGATTTCCCATACAGTCTTATAAA 332068
Query 76999 CTTGTTTGATATCATCTGGAAGGTT---TGTATTTTGAATGGAACCACCATCTGATATAA 77055
| ||||| || |||| | | |||||||||| ||| || || ||||
Sbjct 332067 GCTCACGTATATCCTCCGGAATTGTAAGTATATTTTGAATACTGCCATTATTTGCAATAA 332008
Query 77056 TTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAG 77115
| | | ||| | ||||| ||| || |||| |||| | | || | || |
Sbjct 332007 TATTCTGCTTAAGCCTATCATCCCATAACCCAAGCTCTAGTAAATCATTTAGCAAGTGCG 331948
Query 77116 GATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATG 77175
|||| |||| || || ||||| | ||| |||||| ||||| || ||| |||
Sbjct 331947 GATTTACTACAAAGAACTCACCAGATAGTACCCTACGATGATAAATGTTCGAGGTGAATG 331888
Query 77176 GTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCA 77235
| || | | |||||||| || |||||||| | ||| || || |||||||| || | |
Sbjct 331887 GCTCAAAACTCTCATTGTTACCTAAAATTTGTGAAGTGGATGCTGTTGGCATTGGAGATA 331828
Query 77236 CCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCC 77295
||||| | ||| | | ||||| | | || ||||||| || | | |||||| |
Sbjct 331827 TCAATAGAGAATTACGAATACCATATTTGGAAATCCTATCTTTAAGCGAATCCCAATCAC 331768
Query 77296 AAAGATCTGAA---GGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCAT 77352
|||| | || ||| ||| |||| | ||| |||||| ||| || ||||| |||
Sbjct 331767 AAAGTCCAGAGTCTGGTGTAACTCCCCACATATCAAATTGTAAAATACCCTTACTCGCAG 331708
Query 77353 ATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCA 77412
|| || ||||||||| || || || | | |||| || || ||||| || || || |
Sbjct 331707 GCGAACCGGAATATGTTTCGTATGGACCATATTTTTCTGCAAGCTCACAGCTAGCATCGA 331648
Query 77413 ATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTAT 77472
||| | ||||| || ||| || || | ||||| | | | ||| | | |
Sbjct 331647 GAGCTGCATAATAGATAACTTCAAAGATTTGTTTATTTAACTTCTTAGCTCCCTCAGACT 331588
Query 77473 CAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAG 77532
| | || | | | | || || ||||| | || |||| ||||| || | |
Sbjct 331587 CGTATGGCATACGAAGCATCATGAAACAGTCTGCGAGCCCTTGAATGCCAATCCCCAATG 331528
Query 77533 GTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAA 77592
| | |||||| ||| || || || |||| || || |||||| || ||| || |
Sbjct 331527 GACGATGTCTTAAATTCGAGTTTGTACATTCTTTAAGAGAATAATATCCAACGTCAATCA 331468
Query 77593 TTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAA-- 77650
|||||| | ||| || || || || || || |||| ||| |||||||||
Sbjct 331467 ATTTATTCAAATTCCTCGTAATCACCTTCGTAACTTCTTTTAACTTATCAAAATCAAACG 331408
Query 77651 TCTTCC-ATCTATAACAAACATGTTCA-AAG--CTATAGATGCTAGATTACAAACTGCTA 77706
|||| || | || ||| | || ||| | ||||| || ||||||||||| || |
Sbjct 331407 TCTTGTTATTTTTATCAACGAACTTTGGAAGGCCAATAGACGCCAGATTACAAACGGCAA 331348
Query 77707 CCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGC 77766
| || | | | | |||| ||| || || || |||| ||||| | ||||| |
Sbjct 331347 CTTCGTCCTTGCTAGTGTATTCTATGATTTCTGTGCATAAGTTACTTGAAACAATAGTTC 331288
Query 77767 CCAGATTTTGTTGGTTGCTCTTTTTATT-GCATGAGTCCTTATAAAGAATAAACGGAGTC 77825
||| ||||| ||||| || || |||| ||| | || |||||| |||||| || |||
Sbjct 331287 CCAAATTTTTCTGGTTACTTTTGCTATTTGCAGCA-TCTTTATAACAAATAAATGGTGTC 331229
Query 77826 CCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGAT 77885
|| || ||||| || | | | || | ||| | | ||| || || |||| | |
Sbjct 331228 CCCGTCTCAATTTGAGCCTGTAAGATTAAGAACCAAA-GTTTCT-GCGCTT-TCATCGTT 331172
Query 77886 TTGTATC----GCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCA 77941
|| || |||| | | | ||||| | ||||||| | ||| ||||| |||||
Sbjct 331171 TTCCTTCCACGGCCT-TGTTTCTCATACTCTTCATATAGCTTCTTAAAATCATCGCCCCA 331113
Query 77942 AACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTT 78001
|||||| | |||||| |||||||| ||||||||| | | ||| || ||| | ||
Sbjct 331112 AACATCTTGCAATCCCCTGCATTCATCTGGGCACATTAGAGTCCAATCTTGATCCTTCTC 331053
Query 78002 AACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATG 78061
||||| || ||| || |||||||| | ||| || ||| ||| ||||| || |||
Sbjct 331052 AACTCTTTCCATGAACAGATCAGGAACCCAAAGGGCAGGAAAGAGATCGCGACATCTCAT 330993
Query 78062 TTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGG 78121
||||| ||||| |||||| ||| || | |||||| | || |||| ||||||||
Sbjct 330992 CTCTTCCTTTCCATGATTCTTCCTAATTTCAATAAACTCTACAACATCAACGTGCCATGG 330933
Query 78122 TTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGC 78181
||| | ||| ||||| || | || || || || || ||||| ||||| || ||
Sbjct 330932 TTCCAAATAAATTGCAATGGCACCTTTACGCTTCCCTCCACCTTGATCAATATACCTAGC 330873
Query 78182 GGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGA 78241
|||| ||||||||| | || ||| ||||| | || |||||| | |||||||||||
Sbjct 330872 AGTGTCATTATAAACGCGCAGCATCGGAATTAATCCATTAGATCTCCCATTTGTTCCTCG 330813
Query 78242 AATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTT 78301
|||||| ||| || | | ||||||||| | | | ||| | || ||||| ||||
Sbjct 330812 AATATATGAACCAGTTCCTCTAATATTACTTACTGCCACCCCAAGGCCACCTGCAGTCTT 330753
Query 78302 AGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCAT 78361
| || ||||| | | ||| || ||||||| | ||| || || ||
Sbjct 330752 ACTAATGTTTGCGCATTTAGTTAGTGTGTCAAAGATACCGTTTATTGAATCTTCTGGAAT 330693
Query 78362 GTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGG 78421
| || | |||||| ||||||||| | | || |||| |||||| | ||| ||
Sbjct 330692 CCTGAGTAAAAAACAAGATGACATTTGAGGTCGCGGCGTGCCTGAATTAAAGAGTGTGGG 330633
Query 78422 AGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTAT 78481
| |||||| ||||| |||||| || | | | |||||||||| || | ||| ||
Sbjct 330632 TGTTGCATGAGTAAAATATTTTTGCGATAACAACTCATATGTTTCAAGTGCAGCTTCAAT 330573
Query 78482 GTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGT 78541
|| | |||||| || | || ||||||| | ||| || |||||||| ||
Sbjct 330572 ATCACCACAATGAATACCACAAGAAACCCGCATCAGAAGATGTTGTGGTCTTTCCACAAC 330513
Query 78542 CTTATTATTTATTTTCAACAAG-TATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 78600
|| || | ||||| || ||| || ||| |||| | |||||| || ||||||| | |
Sbjct 330512 TTTGTTGTCAATTTT-AAGAAGATAGGATCTTTCTAGAGTTTTGAAGGCAAAATAATCAT 330454
Query 78601 ATGAAAAGTCT 78611
|| ||| |||
Sbjct 330453 ATTCAAAATCT 330443
Score = 206 bits (228), Expect = 4e-48
Identities = 586/885 (66%), Gaps = 29/885 (3%)
Strand=Plus/Plus
Query 47826 TCTTCTTGA--GAC-ATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAA 47882
|| |||||| ||| |||||||| ||||||||||||| || | || ||||| ||
Sbjct 53135 TCATCTTGATTGACCATAACTCCAGCCATTTGATATTCACCAACTCTCTTTTCGAAGAAG 53194
Query 47883 TTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAA 47942
|||||||| |||| | ||| ||| ||||| ||||||| |||||| | || ||
Sbjct 53195 TTAGTTTTACCTTGAAGTGAAATAAGGTCCATCCAATCAAAAGGATTAGAAACGTTGTAG 53254
Query 47943 AtttttttAA-ATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTT 48001
|||||| || |||| || | ||| | |||||| ||||| ||||| ||||||
Sbjct 53255 ATTTTTGGAATATCC-AAGGCAAAAAGTAATCTATCAGCAACAAATTCAATATATTGGGC 53313
Query 48002 CATCATTTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTG 48061
||| | | | ||||| || ||||| | ||| || |||| || |||||| | |
Sbjct 53314 CATAAGTCTTGAGTTCATACCAATAAGATCAACAGGAAGAGAGTCACAAAGAAAGTTTCT 53373
Query 48062 TTCGATAGTGACAGCATCCACTATTATCGATGTTACCGTTTCCTC--ACTTGGTGGATAC 48119
||| | ||||| || ||| || |||| || || | |||| |
Sbjct 53374 TTCAACTTCAACAGCTTCTGATATGATT--TGTT---GTACTCTAGGAGCTGGTAATTTA 53428
Query 48120 AACAAATG---TTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTA 48176
|| | | |||| | |||||||| ||||| ||| ||| ||||||||||| | ||||
Sbjct 53429 AATTTAAGGGCTTTATATATTAAACAAGCAAAGTCAGCATGGAGACCTTCATCACGACTA 53488
Query 48177 ATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATT 48236
|| | ||| |||||||||||||| || ||||| |||||||||||||| |||||||| |||
Sbjct 53489 ATAAGTTCATTAGAAAATGTGAGTCCAGGCATAAGTCCACGTTTTTTAAGCCAAAAAATT 53548
Query 48237 GCCGCGAAAGAT-CCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTC 48295
| | | |||| | |||||||| | || ||||| || || ||| | ||| ||| ||
Sbjct 53549 G-CACAAAAGCTACCAGAAAATAGAATTCCTTCAACAGCACAGAATCCAATAATTCTTTC 53607
Query 48296 TCCGTAACTGGCTTCGTTGTGTATCCA-CCGTT---GTGCCCAATCAGCCTTCTTCTTTA 48351
| || ||||| | || || || || |||||| || || ||||| || |
Sbjct 53608 AGCAAAA----GATCGTTCAGAATTCATCCATTTAGTTGCCCATTCTGCTTTCTTTTTAA 53663
Query 48352 CACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGT 48411
|| || || || | |||||| | | ||| || |||| ||| |
Sbjct 53664 CAGCTTCAATATGAGAAATTGCTTCAAAGAGCATTTGACGTTCTTTAATATCAGTAATAT 53723
Query 48412 AAGTATCTATTA--AAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAA 48469
| |||| || | || || ||| |||| || || | |||||| | ||| |||||
Sbjct 53724 ATCTATCAATAAGTAATGA--ATAAGTTTCACTATGTATTTGTTCAATAGACATTTGAAA 53781
Query 48470 TCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATT 48529
| ||| | ||| ||||||| || |||| || || || | | || || ||
Sbjct 53782 AGCATAATACATTCTGGCTTCTGGTATTTGTATTTCTCTAAGGAAATTTACTGCTAAGTT 53841
Query 48530 CTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTT 48589
|| | || || |||||||| |||||||| |||||||| || | ||| ||||||| | |
Sbjct 53842 TTCCATAACAATGCCATCACTTGCAGCAAAGAATGCTAAGACGTATTTGATAAAATGTCT 53901
Query 48590 TTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGC 48649
||| | | || | | ||| || | |||||| || ||| | |||||||
Sbjct 53902 TTCAGGGTCTTTAAGACTTTCCCAATCTCTAGTATCTTGACTTAGATCAATCTCTTCAGT 53961
Query 48650 TGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATC 48694
|||||||||||| || |||||||||||||| ||| |||||
Sbjct 53962 AACCCAAAATGATGCTTCAGCTTTTTTATACATTGACCAAATATC 54006
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694667766680160
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