Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001593475.1_202016-03- 17] 156 sequences; 9,156,091 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq139 93.3 4e-14 >seq139 Length=542781 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 18839 TGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGT 18898 ||||| || |||||||| || |||||||| || | | ||| | | || |||| || Sbjct 271482 TGCAAAGTGGACTCCTTCTGGATATTGTAGTCAGATAGAGTTCTACCATCTTCCAATTGC 271423 Query 18899 TTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTC 18958 || || ||| | || || | ||| ||||| || | |||||| || || || || Sbjct 271422 TTTCCAGCAAAGATCAGACGCTGTTGATCAGGAGGAATGCCCTCCTTATCCTGGATCTTT 271363 Query 18959 TGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTT 19018 ||||| | | | ||||||| ||| || ||| | || ||||| || |||||| Sbjct 271362 GCCTTTACATTCTCAATAGTATCGGAAGGTTCAACTTCCAATGTGATGGTCTTTCCTGTT 271303 Query 19019 AAAGTTTTGACAAAAATTTGCATTTT 19044 ||||||||||||||||||||||| || Sbjct 271302 AAAGTTTTGACAAAAATTTGCATCTT 271277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414572011793464