Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001593475.1_202016-03-
17] 156 sequences; 9,156,091 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq7 136 6e-28
>seq7
Length=125556
Score = 136 bits (150), Expect = 6e-28
Identities = 194/270 (72%), Gaps = 6/270 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||||||||| | ||| || |||||||||||||| ||||| |||||||| |||
Sbjct 105590 GCCAAGCGTCATCGTAAGGTTCTCCGTGATAACATCCAAGGTATCACAAAGCCAGCCATC 105531
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||||| || ||| | ||||| || || ||| | || | ||| |||| || || |
Sbjct 105530 CGTCGTCTCGCACGTAGAGGTGGTGTTAAACGTATTTCCGCCTTGATCTACGAGGAAGTC 105471
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
| | ||| |||||| ||| | | ||||| || | |||||| | ||| || |||
Sbjct 105470 AGAGGTGTATTGAAGGCATTCTTAGAAACCGTAATTAAGGATGCTGTTACCTACACTGAG 105411
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
| || | |||||||||||| || | |||||| | || |||| | || | ||||||
Sbjct 105410 TATGCCAGACGTAAGACTGTTACTGCTATGGATGTAGTTCATGCTCTTAAGAGACAAGGC 105351
Query 16673 CGTAAGA-TTTAT--GGTTTTGGAAGTTAA 16699
|||| ||||| |||||||| |||||
Sbjct 105350 ---AAGACTTTATACGGTTTTGGTGGTTAA 105324
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075057368108
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |