Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001593475.1_202016-03- 17] 156 sequences; 9,156,091 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq124 565 2e-155 seq149 262 3e-64 seq31 147 2e-29 seq127 118 8e-21 seq23 109 4e-18 seq143 86.0 5e-11 >seq124 Length=179408 Score = 565 bits (626), Expect = 2e-155 Identities = 1078/1570 (69%), Gaps = 32/1570 (2%) Strand=Plus/Plus Query 517162 AGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAAT 517221 ||| || ||| ||| | ||||| | || | || ||||| || || |||||||| Sbjct 83021 AGCATCATTAACCATACGTTCAATATCGTCCTTTGATAATCTACCCTTATCGTTAGTAAT 83080 Query 517222 AGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATT 517281 ||| || || || || || ||||||| | |||| ||||| | |||||||| Sbjct 83081 AGTGATCTTGCTGCTCTTACCAGTGCTTTTATCAACAGCAGATACATTCAAGATACCATT 83140 Query 517282 GGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCC 517341 ||||| | |||||| |||||||||||||| || || ||||| | || ||||| || || Sbjct 83141 AGCATCAATATCAAAAGTGACTTCAATTTGTGGTACACCTCTTGGTGCTGGTGGAATACC 83200 Query 517342 TTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAA 517401 || | || || |||| || || ||||| ||||| | || |||||||| | Sbjct 83201 ATCAAGATGGAACTTTCCGAGGAGATGGTTATCCTTAGTCATGGCTCTCTCACCCTCATA 83260 Query 517402 AATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTC-TGGATTTTT 517460 || |||||| || | | || ||||| | |||||| || || ||| || || || Sbjct 83261 AACTTGGATCAAGACACCGCTCTGGTTATCAGCATAAGTAGTGAAGACTTGTGTCTTCTT 83320 Query 517461 TACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTA 517520 | | ||| | ||||| || | ||||||| |||||||||| |||||| || ||||||| Sbjct 83321 TGCTGGGA-TAGTTGTATTACGTTCAATAAGCTTGGTCATAACACCACCAGCAGTTTCTA 83379 Query 517521 AACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTT 517580 |||| || || | |||| ||||| | || | | || || | || | || Sbjct 83380 AACCGAGTGATAATGGAGCAACATCCAATAATAAGAGATCCTGTACGG---CAGAGGATT 83436 Query 517581 GACCAACA---AGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGAT 517637 | || || | ||||| ||||| | |||||||||||| |||||||||||||| |||| Sbjct 83437 GCTCACCATTTAAGATAGCAGCTTGTACAGCAGCACCATAAGCAACAGCTTCATCTGGAT 83496 Query 517638 TAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT--TGAAAGAAGTTGTCTTA-CCT 517694 | | | || | | | |||||| || ||| |||| |||| ||| | || | ||| Sbjct 83497 TGATTGCTTTGCATGGCTCTTTACCGTT-AAAGAATTCCTGAATCAAG--GCCTGAACCT 83553 Query 517695 TAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTT 517754 | |||||||| | || || ||||| ||||||| ||||| || | || |||| Sbjct 83554 TTGGAATACGTGTAGAACCACCAACCAATACAACATCATGTACAGATCTCTTGTCCATAC 83613 Query 517755 TTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAA 517814 | |||| | ||||| ||||| || | | | || | || | || | || | Sbjct 83614 CAGCATCCTTGAGTACTTTCTCAACTGGAGCTAAAGTTGCACGGAAGTAATCAGCGCAGA 83673 Query 517815 GTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAAT 517874 ||||||||||| | |||||| | | | || ||||||||| || || | | |||| Sbjct 83674 GTTCTTCGAATCTGGCTCTACTGATGGCAACTGAATAATCAATACCCTCATAGAGTGAAT 83733 Query 517875 CAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTG 517934 | | ||||| |||| |||||| ||||| || | | | || ||||| |||||| | Sbjct 83734 CTAACTCAATTGTAGCTTGAGTAGAAGATGACAAAGTTCTCTTTGCACGCTCACATTGAG 83793 Query 517935 TCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGT---TTTATATTTTCTCT 517991 | || ||||||| ||| ||| | || | | | ||||| | | ||| ||||||| Sbjct 83794 TTCTGAGTCTTCTTAAAGCTCTAGCATTTGAAGTTAAATCCATACCTCTATTCTTTCTCT 83853 Query 517992 TGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAG 518051 ||||||||| ||||| || || || | ||||||||||||||||| ||||| | || Sbjct 83854 TGAAATCTTGTACACAGAATTCCACGAGTCTGTTATCAAAATCTTCACCACCCAAGTGAG 83913 Query 518052 TATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACAT 518111 ||| || | |||||| | |||| |||| |||||||||| || || | | ||||| Sbjct 83914 TATCACCAGCGGTAGCTTTAACTTCAAAAATACCATCTTCAATAGTTAATAATGATACAT 83973 Query 518112 CATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTC--TTGGTTT-T 518168 || || |||||||| | ||| || || | |||||| | || | | || ||| | Sbjct 83974 CAAAAGTACCACCACCTAAATCGAAGATCAATACATTTCTCTC---GCCAGTTCCTTTCT 84030 Query 518169 TATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAA 518228 ||||||||||||| |||| |||||| |||||||| || ||||| ||||||| ||||| | Sbjct 84031 TATCAAGACCATAAGCAATAGCAGCTGCAGTTGGCTCGTTAATGATTCTCATTACATTCA 84090 Query 518229 GACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAG 518288 |||||||||| |||||||| || || ||||| | |||||| || || ||||| || | Sbjct 84091 AACCAGCAATTGCACCTGCATCCTTTGTTGCTTGACGTTGTGAGTCATTGAAATAAGCTG 84150 Query 518289 GAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCA 518348 ||||||||| || |||| | | || ||| | || || | ||| |||| Sbjct 84151 GAACAGTAACTACAGCATTCTTAATTTGGCGACCCAAGTATGCTTCAGAGATTTCCTTCA 84210 Query 518349 TTTTACTTAAAATCATTGATGAAATTTGTTCTG--GGGAATATTGCTTGGATTCATTTTG 518406 | || ||||| ||| | ||||||| ||| | ||| ||| ||| |||| | Sbjct 84211 TCTTTTGTAAAACCATAGCAGAAATTTCTTCAGCATGGA--ATTCCTTCTTTTCACCTAA 84268 Query 518407 ATATGATAC-TTCAAAATATGGTTTA---TTACCAACATTAATAACTTTAAATGGCCAGT 518462 || ||| | | || ||| ||| || | | ||| |||||||||||||||| Sbjct 84269 GTAGTTTACACTGATGAT-TGGCTTATCCTTTGGACCTCTAACTACTTTAAATGGCCAGT 84327 Query 518463 ATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCAT 518522 ||||||| ||| || || |||| ||| | ||||||||| | ||||| |||| Sbjct 84328 GAGTCATATCACTTTGTACTGCCTGATCATCAAACTTTCTACCAATAAGACGTTTAGCAT 84387 Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 |||||| || || |||||| | ||| |||||| || |||||||| ||||| ||| Sbjct 84388 CAAAAACTGTGTTTTCTGGATTTCTAGCAACTTGATTCTTTGCTGCATCACCAATAAGAC 84447 Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642 | || || || ||||||| ||||||||||| ||||| || ||||||||||| || | || Sbjct 84448 GCTCAGTTTCAGTAAATGCTACATATGATGGTGTTGTACGGTTACCTTGATCGTTTGGAA 84507 Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702 ||| || || || | ||| ||||||||| ||||| | || || |||||||||| Sbjct 84508 CAATATCTACAGTATCGTTTCTCCATACACCAACACATGAGTATGTGGTACCTAAATCAA 84567 Query 518703 TACCAATAGC 518712 |||||||||| Sbjct 84568 TACCAATAGC 84577 Score = 102 bits (112), Expect = 6e-16 Identities = 204/300 (68%), Gaps = 17/300 (6%) Strand=Plus/Plus Query 322085 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCTA-ATGTTCTAAATACTCC 322143 ||||||||||| || ||||| || |||| |||| | ||| | ||| ||| | || Sbjct 83889 TCAAAATCTTCACCACCCAAGTGAGTATCACCAGCGGTAGCTTTAACTTCAAAA-ATACC 83947 Query 322144 ATTTGAGATATTCATTAACGAAACATCTAAAGTCCCAGCTCCTAAGTCATAAACAATTAC 322203 || | ||| | | ||| || ||||| ||||| ||| | ||||| || | | | ||| Sbjct 83948 ATCTTCAATAGTTAATAATGATACATCAAAAGTACCACCACCTAAATCGAAGATCAATAC 84007 Query 322204 GTTAC---CACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGC 322260 || | | |||||| ||| || ||| | ||| || |||| ||| || Sbjct 84008 ATTTCTCTCGCCAGTTCCTTTCTTA------TCA------AGACCATAAGCAATAGCAGC 84055 Query 322261 TGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAG 322320 ||||||||| || ||||| ||| | | |||| ||||| |||||| | | | ||| Sbjct 84056 TGCAGTTGGCTCGTTAATGATTCTCATTACATTCAAACCAGCAATTGCACCTGCATCCTT 84115 Query 322321 AGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTATTAAT 322380 |||||||| | |||| |||||| ||||| ||||| ||||||| || || || ||||| Sbjct 84116 TGTTGCTTGACGTTGTGAGTCATTGAAATAAGCTGGAACAGTAACTACAGCATTCTTAAT 84175 >seq149 Length=101380 Score = 262 bits (290), Expect = 3e-64 Identities = 1025/1586 (65%), Gaps = 43/1586 (3%) Strand=Plus/Plus Query 517139 TTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAG 517198 || ||| |||| |||||| | ||| || ||||||| | ||| || | || | ||| Sbjct 18782 TTGTCTTCTTCGGCAAATTGCTCAGCCTCCTTAATCATACGCTCTATGTCTTCCTGTGAG 18841 Query 517199 AATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCG 517258 | ||| || || ||| || |||||||| |||| |||||| || ||||| Sbjct 18842 AGTCTACCCTTATCATTTGTGATAGTAATCTTCTCGGATTTACCAGTACCCTTATCCTTT 18901 Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 ||| | || | | |||||||| | ||| | ||||| || || |||||||| || || Sbjct 18902 GCACTAACTTGTAAAATACCATCAGTATCAATTTCAAAAGTAACCTCAATTTGGGGAACA 18961 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 ||||| |||| |||||||| || | | ||| |||| || || ||||| ||| Sbjct 18962 CCTCTTGGAGCTGGTGGGATTCCAGAAAGCTCGAATTTTCCGAGGAGGTTGTTATCCTTA 19021 Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT---TGATTATCTGAA 517435 || | | || |||||||| ||| |||||| | ||||| | ||||||||| Sbjct 19022 GTCATTGGACGCTCACCCTCATAAACCTGGATA---AGTACAGCTGGCTGATTATCTTGG 19078 Query 517436 TAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATT 517494 ||||| | || ||| ||| | || || |||| ||||||||| |||| | || Sbjct 19079 TAAGTACTGAAAACT-TGGCTCTTCTTGGTTGGAACAACAGTGTTTCTACCAATGAGCTT 19137 Query 517495 GGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGAC 517554 ||||||| ||||| | || || | ||| | || | |||||| ||||| | || | Sbjct 19138 TGTCATAACTCCACCAACAGTCTCAATACCTAAAGTTAAAGGAGTAACATCCAATA--AT 19195 Query 517555 AATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACC 517614 |||| || | | || || ||| | | ||| | ||||| | |||||||| Sbjct 19196 AATA-----AATCACTACCTCC--TTCACCTGCTAAGATACCAGCTTGTACGGCAGCACC 19248 Query 517615 ATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT- 517673 ||| || || |||||||| || |||| | ||| | | || |||| || || | Sbjct 19249 ATAAGCGACGGCTTCATCTGGGTTAATTCCTCTGTTTGGCTCCTTTCCATCAAAGAACTC 19308 Query 517674 -TTGAAAGAAG-TTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTC 517731 |||| | | ||| | |||||| ||||||| || || || || || || || || Sbjct 19309 CTTGATCAAGGCTTGAAT---CTTAGGGATACGAGTAGAACCACCTACCAAAACGATCTC 19365 Query 517732 ATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACC 517791 || || | || || | | | | |||| ||||| || | ||| || || | | Sbjct 19366 ATCTACTTCAGACTTTTTGATTCCAGCATCCTCCAAAACCTTCTTAACTGGCTCGATAGT 19425 Query 517792 CGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATA 517851 | ||| |||||||| | | | || ||||| |||||||| || | || | | Sbjct 19426 CTTTCTGAACAAGTCAGCATTCAACTCGTCGAACTTAGCTCTGGTCAAGGTTTCGCTCAG 19485 Query 517852 ATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGC 517911 ||| | | || | |||| |||| || | | || ||| | | ||||| || || Sbjct 19486 ATCTACATCCTCCATCAAACCTTCAATCTCGACCTTAACTTGTGGAGCTGAAGAAAGGGC 19545 Query 517912 ACGTTTAGCACGTTCACATGCTGTCCT-TAGTCTTCGTAAGGCTTTTGCTGATTGA-TTC 517969 | || | || ||| | || || | || |||| |||| | | || || || Sbjct 19546 TCTCTTCG-AC-TTCTCGACCTCTCTTCTAAGCTTCTGAAGGGCTCTCTTGTCAGACTTT 19603 Query 517970 AAATCTGTTTTATAT-TTTCTCTTGAA-ATCTTCAACACACCATGTTACAAGACGATT-- 518025 | ||| ||| | | ||| ||||| ||||| | | || | || || | Sbjct 19604 ACATCC-TTTCCTGTCTTTGACTTGATGATCTTGATAAAG---TGGTCCATAACTCTCTG 19659 Query 518026 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 518085 ||| ||||| ||||||||||| | |||| || ||||| || | ||||| || Sbjct 19660 ATCGAAATCCTCACCTCCCAAATGGGTATCACCACTTGTAGCAACGACCTCGAAAACGCC 19719 Query 518086 ATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 518145 | |||| | ||| |||| |||||| || |||||||||| ||| | | | | Sbjct 19720 GTTATCAATGGTCAAGAGAGAAACATCAAAAGTACCACCACCCAAATCGTATACTA--AA 19777 Query 518146 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 518205 || | |||| | ||| | ||||| | |||| | |||| || || || ||||| || Sbjct 19778 ATGCTCTTCTCAG-CTT---TCTTATCCAAACCAAAAGCAATTGCTGCTGCTGTTGGCTC 19833 Query 518206 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 518265 ||||||||| | | ||||| | ||||||||| || ||||| || || || || | Sbjct 19834 ATTAATAATACGGATTACATTCAAACCAGCAATAGCACCAGCATCCTTGGTAGCCTGACG 19893 Query 518266 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAAT 518325 || | ||| ||||| || || || |||||||| || |||| ||||||| ||||| | Sbjct 19894 CTGAGCATCATTAAAGTAAGCTGGGACAGTAATTACTGCATGCTTTACTTCCTTACCGAG 19953 Query 518326 ATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGA 518385 |||||| || ||| |||||| || || | ||| | |||| | |||||||| Sbjct 19954 ATAAGCCTCAGCAATTTCTTTCATCTTGAGCAAGACCATAGCGGAAACCTCTTCTGGGGC 20013 Query 518386 ATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAAT 518445 ||||||| ||| | | || |||| | || || || || | ||||| Sbjct 20014 TAATTGCTTCTTCTCACCCTTAACAGAAACTTGTATGTAAGGCTTGCTATCTTTGTTAAT 20073 Query 518446 AACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACC 518505 || | | |||| | | || |||| ||| ||| | || |||||| | ||| Sbjct 20074 AATCTCATATGGTAACAAAGTCTTATCCTTTTGGACAGAATCATCCTTAAAACGACGACC 20133 Query 518506 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGC 518565 ||| | || ||| | || || | ||| | |||||| || | |||||||| ||||| Sbjct 20134 AATAAGTCTCTTTACGTCGAACAAAGTCTGAACTGGATTGATAGTAGCTTGATTCTTGGC 20193 Query 518566 TGCATCTCCAATCAGATGT-TCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGAT 518624 || || ||||||| || | || || || ||||| ||||||||||| || | |||| Sbjct 20194 TGATTCACCAATCA-ATCTCTCATCATCAGTGAATGATACATATGATGGTGTAATACGAT 20252 Query 518625 TACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAA 518684 ||||||| ||||| | |||||| || ||| ||||||| | | | ||| ||||| | Sbjct 20253 TACCTTGTTCATTTGGAATAATCTCTACTCTACCATTCTTGTAGATACCAACACATGAAT 20312 Query 518685 AAGTTGTTCCTAAATCAATACCAATA 518710 |||| || |||||||| ||||||||| Sbjct 20313 AAGTAGTACCTAAATCGATACCAATA 20338 >seq31 Length=60375 Score = 147 bits (162), Expect = 2e-29 Identities = 337/493 (68%), Gaps = 27/493 (5%) Strand=Plus/Minus Query 517155 ATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTAT 517214 |||||| ||||||||| |||||| ||||||||| | | || | | ||| || || Sbjct 47285 ATTCTTCAGCTTCTCTGATCATTTTCTCAATTTCAGCACCACTTAGACCTCCA-GAAGAT 47227 Query 517215 TAGTAATAGTAATATTCTTGGATTTGTTT---GTTGATTTATCAGCGGCAGTCACATTAA 517271 | |||||| || | | || ||| ||| ||||| |||||| ||| ||||| | Sbjct 47226 TG--AATAGTGATCT-CGTG--TTTCTTTCCAGTTGACTTATCAATTGCACCAACATTCA 47172 Query 517272 GAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAG 517331 ||| ||||| ||||| | |||||| ||||||||||||||||| |||||||| | || | Sbjct 47171 TAATTCCATTTGCATCAATATCAAAGGTGACTTCAATTTGAGGAACCCCTCTGGGTGCTG 47112 Query 517332 GTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTT 517391 | || || || || | |||| ||| || |||||||| || |||| || || Sbjct 47111 GAGGAATTCCCATCATTTCAAATTGTCCAAGCAACTTATTATCAGCAGCAAATTCTCTTT 47052 Query 517392 CACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTC 517451 | || | ||||| || || |||| ||||||||| |||| | ||| | |||||| Sbjct 47051 CTCCTTGGAAAACTTTAATTCCAACTTGAGTTTGATTGTCTGCAGCAGTGGAGAATACT- 46993 Query 517452 TGGAT-TTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTG-GTCATAATACCACC 517509 ||| | |||||| || ||||| || ||||| | ||| | || | || | || ||||| Sbjct 46992 TGGCTCTTTTTAGTGGGTATTGTGGTATTTCTGTTAATTA-ATCGAGTAAAAACTCCACC 46934 Query 517510 TGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT-TTTGAAGTT 517568 ||||| | ||| | ||| | || || || || | || | || || |||| Sbjct 46933 CAAAGTTTCAATACCTAAAGATAAGGGTGTAACGTCGAGTAACAAAAGATCCTTGA---- 46878 Query 517569 TTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 517628 |||| || || ||| || | | ||||| |||||||| || ||||||||||| Sbjct 46877 TTTC-TCCCTT----CAA----AACACCAGCTTGTATAGCAGCTCCCATTGCAACAGCTT 46827 Query 517629 CATCAGGATTAAC 517641 | ||||| ||||| Sbjct 46826 CGTCAGGGTTAAC 46814 Score = 96.9 bits (106), Expect = 3e-14 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 || || |||| ||| || || ||||| |||||||| ||||| ||||| | || || Sbjct 46275 CCGTATGCAAGAGCTGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAGCCTGCT 46216 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296 || || ||||| ||||| ||||| | || ||||| ||||| || || || |||||| Sbjct 46215 ATAGAGCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTA 46156 Query 518297 ATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTT 518352 ||||| |||| |||| | |||||| ||||| || |||| ||||||||| Sbjct 46155 ATAACAGCATGCTTTACACTTCTACCAAGATAAGTTTCGGCAGTTTCTTTCATTTT 46100 Score = 96.9 bits (106), Expect = 3e-14 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 322244 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 322303 |||||||||||||||||||| ||||| |||||||| ||| | |||| ||| || || Sbjct 46275 CCGTATGCAAGAGCTGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAGCCTGCT 46216 Query 322304 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 322363 || ||| ||| ||||||||| | ||| | |||||||| || ||||| |||||| Sbjct 46215 ATAGAGCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTA 46156 Query 322364 ATAACTGC 322371 ||||| || Sbjct 46155 ATAACAGC 46148 >seq127 Length=123656 Score = 118 bits (130), Expect = 8e-21 Identities = 334/503 (66%), Gaps = 15/503 (3%) Strand=Plus/Plus Query 636275 TATTATGATTTCATTCACAAAGAACTTATTACTTTTTCTGTGGATGACGTTCT--TAGAT 636332 |||| |||||| ||||| ||||||||| | || || || ||| | || ||||| Sbjct 2562 TATTTTGATTTTATTCATAAAGAACTTGTA--TTATTTAGTAGATATGATACTACTAGAT 2619 Query 636333 CTGTTCCTAATTTAATGGATGGATTTAAACCATCACATCGCAAAGTATTTTATGGTTCTG 636392 || |||| |||||| | ||||| || ||||| ||| | |||||| ||| || | Sbjct 2620 CTATTCCAAATTTATTAGATGGTTTAAAACCTGGACAAAGAAAAGTACTTTTTGCAACAT 2679 Query 636393 TTGAAAAGAATATTTATAAGCAAGAGATTAAAGTATCAGATTTGACTGGTTTTGTCTC-G 636451 || |||| || || |||| || ||||||| || | || |||||| ||| | | Sbjct 2680 TTAAAAAAAAGCTTAATAATGAAC---TTAAAGTTGCACAATTAGCTGGTTATGTTGCTG 2736 Query 636452 AATATGACGAAATATCATCATGGTGATCAATCATTATCATCAACTATTGTCGGAATGGCT 636511 || || | ||||||||||| || ||||||| | |||||||| |||||| Sbjct 2737 AACATAGTGCT-TATCATCATGGAGAATCATCATTACAAAGTACTATTGTTAATATGGCT 2795 Query 636512 CAAAATTATGTGGGAAGTAACAATCTCAATTTGTTAATGCCATTGGGAATGTTTGGATCT 636571 ||||||| ||| |||||||| ||||| ||| ||||| |||| || ||||| | Sbjct 2796 CAAAATTTTGTTGGAAGTAATAATCTAAATCTGTTAGAACCATGTGGTCAATTTGGTAGT 2855 Query 636572 AGATTGACCGGAGGTAAAGATTCAGCGAGTCCTAGGTATTTGAACACTAAATTAGATGAT 636631 ||| || || |||||| || | || | ||| | ||||| || | | Sbjct 2856 AGAAAAGAAGGTGGAAAAGATGCAAGTGCTGCTCGTTATATATTTACTAAGCTATCTAAA 2915 Query 636632 TTGGCAAAGAAAATCTTCATTGATTATGATTTTGATATTCTTCAACATCAGTCAGAAGAT 636691 | | | | | || ||| || |||| | | || || ||| | | | | | ||| Sbjct 2916 TGGACTAGATATATTTTCCCAGAGGCTGATGATCCT-TTATT-AAC-TTATTTATATGAT 2972 Query 636692 AATTG---TCGAATTGAACCTGTTTATTATGCTCCTATTATTCCAATGATACTTGTAAAT 636748 || | | |||||||||| | ||||||| ||| || ||||||||||| | |||||| Sbjct 2973 GATGGACAACAAATTGAACCTTTATATTATGTTCCAATAATTCCAATGATTTTGGTAAAT 3032 Query 636749 GGAGCTGAAGGAATTGGTACTGG 636771 || |||| ||||||||||| || Sbjct 3033 GGTACTGATGGAATTGGTACAGG 3055 Score = 98.7 bits (108), Expect = 8e-15 Identities = 223/340 (66%), Gaps = 33/340 (10%) Strand=Plus/Plus Query 634316 ATTACTTATGTACCTGGTCTATATAAAATTTATGATGAAGTAATTGTAAATGCGGCAGAT 634375 |||| ||||||||||||| ||||||| |||| ||||||| | | || ||||| || ||| Sbjct 360 ATTAATTATGTACCTGGTTTATATAAGATTTTTGATGAAATCTTAGTTAATGCTGCTGAT 419 Query 634376 CATAA--CAAGAGA-------------------------TGTCAAACATGTAATATTATC 634408 ||| | ||||| | | ||| ||||| | ||| Sbjct 420 GTTAAAGCTAGAGAAATTTCAACTAAAAATAATCATATTTTTGAAAAATGTACTTGTATT 479 Query 634409 AAAGTTGATATCGATC---AAAAAACAGGTCAAATTTCTGTTTGGAATAATGGTGATGGT 634465 |||||||| || || |||||| || ||||| |||| | ||| |||| || || Sbjct 480 AAAGTTGAAATTAATAGAGAAAAAAAAG---AAATTACTGTATTTAATGATGGAGAAGGA 536 Query 634466 ATTGATGTAGCAATTCATAAAGAACATAATATATGGGTACCATCAATGATTTTTGGAGAA 634525 || | | ||| |||| ||||||| | ||| || ||| | | ||||||||| | Sbjct 537 ATACCAATTGAAATACATAGAGAACATCAAGTATATGTTCCAGAATTAATTTTTGGACAT 596 Query 634526 CTTTTAACGTCTACTAATTACGATAAAAACGAGGAAAAAACTGTTGGTGGTAAAAATGGT 634585 | ||||| ||| |||||| ||| | || || || | | | ||| || | ||||||| Sbjct 597 TTATTAACTTCTGATAATTATGATGATAATGAAGATAGAGTTACTGGAGGAAGAAATGGT 656 Query 634586 TTTGGCGCTAAGCTTGCTAATATTTATTCTGTTGAATTTA 634625 ||||| || || ||| ||||||| | ||| ||||||| Sbjct 657 TTTGGAGCAAAACTTACTAATATATTCTCTAAAGAATTTA 696 >seq23 Length=72756 Score = 109 bits (120), Expect = 4e-18 Identities = 320/483 (66%), Gaps = 24/483 (5%) Strand=Plus/Plus Query 303735 AAGTCCACCATCTCTTGATCTACCTTCTGGCGCTTGTCTTGTAAGTAACTGTGT-TGGTC 303793 ||| || || || |||| ||| |||||| | |||||| || || | |||| || || Sbjct 13835 AAGCCCTCCTTCCCTTGCTCTTCCTTCTCTTGGTTGTCTGGTTAGCAT-TGTGACTGCTC 13893 Query 303794 CACGAGCGCGTGAGTGGGCCTTGTCGCCTACCATTTGTTTCAATCTCTGATAATATGTCG 303853 | | ||| | | || || ||| | ||||| ||||| | ||||||||| || || | Sbjct 13894 CTCTAGCTCTAGCATGAATTTTATCGTCAACCATATGTTTTAGTCTCTGATAGTAAGTTG 13953 Query 303854 GACCAATAAAAATTTTA-ACTGGTAATTTTTTACCATTCATTCCATTATACATAGTTTCA 303912 | |||||||| ||| | ||| ||| | || || | ||||| ||||| |||| Sbjct 13954 GCCCAATAAAGATTCTCGACTCC-AATCTCTTTCCCGTATGGCCATTGTACATTACTTCA 14012 Query 303913 TTACCCCATTCTTCATAACCAGCAGCAACTAATTCATCGT-TA---ATGGCATTAAGATC 303968 || || ||| ||| || | | | ||||| | | || || || | | || Sbjct 14013 TTTCC--ATTTTTCTGAAAC--CCGGAACTATGTAAACGGCTAGATATCTCTTCAACTGT 14068 Query 303969 AACACTTGTAAATGGTGTTGCATCGCCATACACTCCTTTAACTGCACATAGTTTTCCTAA 304028 || | ||||| || ||||||||||| | || ||||| || ||| || ||| || | Sbjct 14069 AATTTTCGTAAAAGGAGTTGCATCGCCCTCCAATCCTTGAATTGCGCACGCTTTGCCAAG 14128 Query 304029 TAAACATTCAATAAGTTGCCCAATAGTCATACGTTTGGGCATACAATTAGGATTGATAAT 304088 || ||||||||| | || ||||| |||||||| || ||| || |||||| ||||| Sbjct 14129 TAGACATTCAATTAAATGGCCAATTGTCATACGCGAAGGAATAGCATGAGGATTCATAAT 14188 Query 304089 AATATCGGGAATTAATCCAGATTTACTGAATAACATATCTGCTCGATGAGCTTTGTAT-- 304146 ||| || ||||| | ||| || | ||| |||||| ||| || | ||||| Sbjct 14189 AATGTCTGGAATAATCCCATCTTGTGTAAATGGCATATC--CTC----AGTTCTGTATGT 14242 Query 304147 ----CCAATGGTACCTTTTTGACCTGCTCTTGACGAAAATTTATCACCTACATTGGGAAT 304202 || || ||||| ||||| || ||| || | ||| ||||| || |||| || || Sbjct 14243 TATACCGATTGTACCCTTTTGGCCATGTCTAGATGCAAACTTATCTCCAACATGAGGTAT 14302 Query 304203 TCT 304205 ||| Sbjct 14303 TCT 14305 >seq143 Length=253651 Score = 86.0 bits (94), Expect = 5e-11 Identities = 127/179 (71%), Gaps = 1/179 (1%) Strand=Plus/Minus Query 668849 TTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCT 668908 |||| |||||||||||| ||| | ||||||||||||| || ||| | || ||| | | Sbjct 143606 TTAA-AGGTAAAGAAGGACGTTTCAGAGGAAATTTGAGTGGTAAAAGAGTTGATTTTAGT 143548 Query 668909 GCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTT 668968 | | | || |||||| || |||| || ||||||| | ||||||||| || ||| | Sbjct 143547 GGAAGGACTGTTATTTCTCCTGACCCTAATATTGAAGTTGATGAAGTTGTAGTACCTATG 143488 Query 668969 ATTATTGCTAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGAGTATTT 669027 || ||||| || || | |||| | ||||| || | | ||||||||| | ||| Sbjct 143487 ATCATTGCAAAGAAATTGACTTATCCCGAAAGAGTTAATGCTATTAATATTGACTCTTT 143429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780814658766136