Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001593475.1_202016-03- 17] 156 sequences; 9,156,091 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq124 603 1e-167 seq149 365 6e-96 seq151 161 1e-34 seq153 123 3e-23 seq31 105 9e-18 >seq124 Length=179408 Score = 603 bits (668), Expect = 1e-167 Identities = 1112/1605 (69%), Gaps = 43/1605 (3%) Strand=Plus/Minus Query 195295 TCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGA 195354 || |||||||||||| |||||||| || || ||||||||||||||||||||| ||| || Sbjct 84581 TCCAGCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAACGA 84522 Query 195355 TCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTT 195414 | |||||| ||| | || || || ||||| ||||||||||| ||||| || || || || Sbjct 84521 TACTGTAGATATTGTTCCAAACGATCAAGGTAACCGTACAACACCATCATATGTAGCATT 84462 Query 195415 TACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTAT 195474 ||| || | ||| ||||| |||| ||||| ||||| ||||| |||| || || Sbjct 84461 TACTGAAACTGAGCGTCTTATTGGTGATGCAGCAAAGAATCAAGTTGCTAGAAATCCAGA 84402 Query 195475 CAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCA 195534 || || || ||||| || || |||||||||||| | |||||| ||| || ||| || Sbjct 84401 AAACACAGTTTTTGATGCTAAACGTCTTATTGGTAGAAAGTTTGATGATCAGGCAGTACA 84342 Query 195535 AGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGAT 195594 | ||||| | ||||| | | | |||| ||| ||| |||||||| || || Sbjct 84341 AAGTGATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGATAAGCCAATCAT 84282 Query 195595 TAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGT 195654 | ||| | | ||||| ||||| |||| | | ||||||||||| ||||||| Sbjct 84281 CAGTGTAAACTACTTAGGTGAAAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGT 84222 Query 195655 GTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGT---AAAACTGTGAAAGATGC 195711 || ||||||||||| | | ||| | | | ||||| ||| | || |||| Sbjct 84221 TTTACAAAAGATGAAGGAAATCTCTGAAGCATACTTGGGTCGCCAAA---TTAAGAATGC 84165 Query 195712 AGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGC 195771 || || ||||| || ||||| |||| ||| |||||||| || || |||||||| || | Sbjct 84164 TGTAGTTACTGTTCCAGCTTATTTCAATGACTCACAACGTCAAGCAACAAAGGATGCAGG 84105 Query 195772 TGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTG 195830 ||| ||||| ||| | || ||| | ||||| || || || ||||| || ||||| |||| Sbjct 84104 TGCAATTGCTGGTTTGAA-TGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTG 84046 Query 195831 CTTATGGTCTGGACAAGAACAAGGAC-GAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889 |||||||||| || ||||| | | || | || | ||||||||||||||| ||| | ||| Sbjct 84045 CTTATGGTCTTGATAAGAA-AGGAACTGGCGAGAGAAATGTATTGATCTTCGATTTAGGT 83987 Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949 |||||||| |||||||| ||| | | | |||||||| |||||| || ||||| || ||| Sbjct 83986 GGTGGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTTAAAGCT 83927 Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATT-T 196008 || |||||||||||||| | |||||||||||||| ||| | || | | ||| | Sbjct 83926 ACCGCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAACAGACTCGT--GGAATTCT 83869 Query 196009 GTCT-GATGAGTTCCGTCGAAAGAATA-AG--AAAGATATTTCTGGAAATCCTAGGGCTC 196064 || | | || ||| ||||||||| || | ||| | || |||| |||| ||| Sbjct 83868 GTGTACAAGATTTCAAGAGAAAGAATAGAGGTATGGATTTAACTTCAAATGCTAGAGCTT 83809 Query 196065 TTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAA 196124 | | | || || ||| |||||| ||||| || ||||| | || ||| | ||||| Sbjct 83808 TAAGAAGACTCAGAACTCAATGTGAGCGTGCAAAGAGAACTTTGTCATCTTCTACTCAAG 83749 Query 196125 CAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACA---ACTATTACCC 196181 | | ||||| | ||||| | | ||| || ||||| ||| || | || | Sbjct 83748 CTACAATTGAGTTAGATTCACTCTATGAGGGTATTGA---TTATTCAGTTGCCATCAGTA 83692 Query 196182 GTGCACGTTTTGAAGAGTTAAACTCTGATTTGTT--TAGGAAGTGTATGGAACCTGTTGA 196239 | || | || ||||| | | |||||| || | || | || | || ||||| Sbjct 83691 GAGCCAGATTCGAAGAACTCTGCGCTGATTACTTCCGTGCAACTTTA--GCTCCAGTTGA 83634 Query 196240 ACAAGTACTTCGTGACGCAAAGATGGATAAG---TCTAAGGTTGATGAAATTGTCCTTGT 196296 ||||||| || || ||||| ||| ||| || |||| |||| | || Sbjct 83633 GAAAGTACTCAAGGATGCTGGTATGGACAAGAGATCT---GTACATGATGTTGTATTGGT 83577 Query 196297 GGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAA 196356 || || || || |||||||| ||| |||| || || ||||| || ||| Sbjct 83576 TGGTGGTTCTACACGTATTCCAAAGGTTCAGGCCTTGATTCAGGAATTCTTTAACGGTAA 83517 Query 196357 AGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGC 196416 ||| | |||| | ||||| || |||||||| |||||||||||||| || || || || Sbjct 83516 AGAGCCATGCAAAGCAATCAATCCAGATGAAGCTGTTGCTTATGGTGCTGCTGTACAAGC 83457 Query 196417 TGCTATTCTCTCAGGTGTTGA-CAAT--AATAACGTCCAAGATCTTCTGCTACTTGATGT 196473 ||||| ||| | || ||| |||| | ||| || ||||| | || | ||||| Sbjct 83456 TGCTA---TCTTAAATGGTGAGCAATCCTCTGCCGTACAGGATCTCTTATTATTGGATGT 83400 Query 196474 TGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAG 196533 ||| || |||| || ||| | ||||| || |||||||||||||| || ||||||| | Sbjct 83399 TGCTCCATTATCACTCGGTTTAGAAACTGCTGGTGGTGTTATGACCAAGCTTATTGAACG 83340 Query 196534 GAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACC 196593 || |||||||| || | |||||| ||||||||| | || ||| | ||||| || Sbjct 83339 TAATACAACTATCCCAGCAAAGAAGACACAAGTCTTCACTACTTATGCTGATAACCAGAG 83280 Query 196594 AGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACT 196653 ||||| || ||||| ||||| || || | || | |||||||||||||| || Sbjct 83279 CGGTGTCTTGATCCAAGTTTATGAGGGTGAGAGAGCCATGACTAAGGATAACCATCTCCT 83220 Query 196654 TGGAACTTTCGAT-TTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATG 196712 |||| ||| || |||| || |||||| | ||||| |||||||| ||||| ||| | | Sbjct 83219 CGGAAAGTTCCATCTTGA-TGGTATTCCACCAGCACCAAGAGGTGTACCACAAATTGAAG 83161 Query 196713 TTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTG 196772 | || ||||| || || ||||| || | || || | |||| || || ||| Sbjct 83160 TCACTTTTGATATTGATGCTAATGGTATCTTGAATGTATCTGCTGTTGATAAAAGCACTG 83101 Query 196773 GCAA-ATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATT 196831 | || | | | ||||| ||||| || || ||||| | | || ||||| || ||| Sbjct 83100 GTAAGAGCAG-CAAGATCACTATTACTAACGATAAGGGTAGATTATCAAAGGACGATATT 83042 Query 196832 GAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAG 196876 |||||||||||| | ||||| || || |||| || || || ||| Sbjct 83041 GAACGTATGGTTAATGATGCTGAGAAATACAAGGGTGAGGATGAG 82997 >seq149 Length=101380 Score = 365 bits (404), Expect = 6e-96 Identities = 1049/1580 (66%), Gaps = 64/1580 (4%) Strand=Plus/Minus Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357 || |||||||||||||||||| |||||||| |||||||||||| | | | |||| | | Sbjct 20341 AGTTATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAG 20282 Query 195358 TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417 ||||||||||| || ||||| ||||| || |||| || ||||| || || | || || Sbjct 20281 AGTAGAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCAC 20222 Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAA 195477 ||| |||| | | |||| || | || || ||||| | |||| || || | | Sbjct 20221 TGATGATGAGAGATTGATTGGTGAATCAGCCAAGAATCAAGCTACTATCAATCCAGTTCA 20162 Query 195478 TACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGA 195537 ||| | || |||| ||| | ||||||||||| ||| |||| | |||||| | Sbjct 20161 GACTTTGTTCGACGTAAAGAGACTTATTGGTCGTCGTTTTAAGGATGATTCTGTCCAAAA 20102 Query 195538 CGATATAAAGGACTGGT---CTTATGAAGTTGTTCCCGGTG-TGGCTGATAAGCCTATGA 195593 |||| || | || | ||||| || || | | | || |||||| | Sbjct 20101 GGATA---AGACTTTGTTACCATATGAGATTATTAACAAAGATAGC----AAGCCTTACA 20049 Query 195594 TTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGG 195653 | | ||| || | ||||||||||| ||||| || || ||||| |||| |||||| Sbjct 20048 TACAAGTTTCTGTTAAGGGTGAGAAGAAGCAATTAGCCCCAGAAGAGGTTTCCGCTATGG 19989 Query 195654 TGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAG 195713 | ||| | |||||||| || | ||| || ||| | ||||| || || |||||| Sbjct 19988 TCTTGCTCAAGATGAAAGAAATTGCTGAGGCTTATCTCGGTAAGGAAGTAAAGCATGCAG 19929 Query 195714 TTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTG 195773 | | ||||| || |||||||| | |||| | || || ||||| || ||||| |||| || Sbjct 19928 TAATTACTGTCCCAGCTTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGTG 19869 Query 195774 CTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCT 195832 ||||||| ||| | || ||| | | ||||| ||||| |||||||| || ||||||||| Sbjct 19868 CTATTGCTGGTTTGAA-TGTAATCCGTATTATTAATGAGCCAACAGCAGCAGCAATTGCT 19810 Query 195833 TATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGT 195892 | |||| |||| ||||| || ||||| | | || | | ||| | |||||| Sbjct 19809 TTTGGTTTGGATAAGAAAGCTGA-GAAGAGCA-----TTTTAGTATACGATTTGGGTGGT 19756 Query 195893 GGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACT 195952 ||||| |||||||| || || | | ||||| || | ||||| || ||||| Sbjct 19755 GGTACTTTTGATGTTTCTCTCTTGACCATTGATAACGGCGTTTTCGAGGTCGTTGCTACA 19696 Query 195953 GCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGTC 196011 ||||||||| ||| | || ||||| ||||||||| | || | || ||| || Sbjct 19695 AGTGGTGATACCCATTTGGGAGGTGAGGATTTCGATCAGAGAGTTATGGACCACTTTATC 19636 Query 196012 -TGATGAGTTCCGTCGAAAGAATAAGAAA-GAT---ATTTCTGGAAATCCTAGGGCTCTT 196066 ||| | | ||| |||| | | |||| ||| | |||| || || || ||| Sbjct 19635 AAGATCA-TCAAGTC-AAAG-ACAGGAAAGGATGTAAAGTCTGACAA---GAGAGCCCTT 19582 Query 196067 CGTCGGCTTAGGACTGCATGT-GA-ACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAA 196124 | |||||| | | | || || | || | || || | || ||||| | | ||| Sbjct 19581 CAGAAGCTTAGAAGAG-AGGTCGAGAAGT-CGAAGAGAGCCCTTTCTTCAGCTCCACAAG 19524 Query 196125 CAATGGTTGAGATTGATTCGTTGTTTGACGGA--ATTGACTTCTATAC--AACTATTACC 196180 | ||| |||||||| |||||| ||| || | ||| | ||| | ||| Sbjct 19523 TTAAGGTCGAGATTGA----AGGTTTGATGGAGGATGTAGATCTGAGCGAAACCTTGACC 19468 Query 196181 CGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAA 196240 | || || || ||||| || |||| ||||| || ||| ||| || || ||| || Sbjct 19467 AGAGCTAAGTTCGACGAGTTGAATGCTGACTTGTTCAGAAAGACTATCGAGCCAGTT-AA 19409 Query 196241 CAAGTACTTCG-TGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGG 196299 ||| || | || || || | |||||| | || ||||| || || | || || Sbjct 19408 GAAGGTTTTGGAGGATGCTGGAATCAAAAAGTCTGAAGTAGATGAGATCGTTTTGGTAGG 19349 Query 196300 AGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAG--CTTCTTCAATAATAAA 196357 || || || ||||| || ||||||||| || || || ||||| || || Sbjct 19348 TGGTTCTACTCGTATCCCTAAGATTCAAGCCTTG--ATCAAGGAGTTCTTTGATGGAAAG 19291 Query 196358 GATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCT 196417 || ||||| | || ||||| |||||||| || ||||||||||| ||||| || ||| Sbjct 19290 GAGCCAAACAGAGGAATTAACCCAGATGAAGCCGTCGCTTATGGTGCTGCCGTACAAGCT 19231 Query 196418 GCTATTCTCTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCA 196477 | ||| | |||||| || | || ||| | | || | |||||| | Sbjct 19230 GGTATCTTAGCAGGTG--------AAGGAGGT-AGTGATTTATTATTATTGGATGTTACT 19180 Query 196478 CCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAAC 196537 || || | | ||| |||| || | ||||| |||||||| || | |||| ||| ||| Sbjct 19179 CCTTTAACTTTAGGTATTGAGACTGTTGGTGGAGTTATGACAAAGCTCATTGGTAGAAAC 19120 Query 196538 ACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCA--ACGTATTCCGATAATCAACCAG 196595 || | |||| || |||||| |||| |||||| || || |||||||| |||| Sbjct 19119 ACTGTTGTTCCAACCAAGAAGAGCCAAG--TTTTCAGTACTTACCAAGATAATCAGCCAG 19062 Query 196596 GTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTT 196654 ||| | ||| || || ||||| || || || ||| || | ||||||||| | || || Sbjct 19061 CTGTACTTATCCAGGTTTATGAGGGTGAGCG-TCCAATGACTAAGGATAACAACCTCCTC 19003 Query 196655 GGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTT 196714 |||| ||||| | | || || ||| | || || ||||||||||| || ||| | ||| Sbjct 19002 GGAAAATTCGAGCTTTCTGGAATCCCACCAGCTCCAAGAGGTGTTCCCCAAATTGAGGTT 18943 Query 196715 TGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGC 196774 || || || || | |||| ||| || | || | || |||| |||| | |||| Sbjct 18942 ACTTTTGAAATTGATACTGATGGTATTTTACAAGTTAGTGCAAAGGATAAGGGTACTGGT 18883 Query 196775 AAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAA 196834 ||||| || |||||| || || ||||| ||||| | || || |||| || || || Sbjct 18882 AAATCCGAGAAGATTACTATCACAAATGATAAGGGTAGACTCTCACAGGAAGACATAGAG 18823 Query 196835 CGTATGGTTCAAGATGCGGA 196854 |||||| || | || || || Sbjct 18822 CGTATGATTAAGGAGGCTGA 18803 >seq151 Length=91942 Score = 161 bits (178), Expect = 1e-34 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 171861 TATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920 |||||| || ||||| || || | || ||||| |||||||| | || ||||| | || Sbjct 54929 TATGCAGATTTTTGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTC 54988 Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980 ||| ||||| || || | || || |||||||| ||||||||||| || ||||| ||||| Sbjct 54989 AGATACAATTGAGAATGTTAAGGCAAAGATTCAGGATAAGGAAGGAATCCCACCTGATCA 55048 Query 171981 GCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAA 172040 ||||| | || ||||| || ||||| | || ||||| | || ||| |||||||||| Sbjct 55049 ACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAA 55108 Query 172041 CGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | ||||||| ||||| ||| ||||| | || | || ||| | |||||| Sbjct 55109 CATTCAAAAAGAGTCCACTTTACACTTAGTCTTGAGACTTAGAGGTGGT 55157 Score = 159 bits (176), Expect = 5e-34 Identities = 175/233 (75%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| || ||||| || || | || ||||| |||||||| | || ||||| Sbjct 55153 GTGGTATGCAGATTTTTGTCAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAAC 55212 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| ||||| || || | || || ||||||||||||||||| || || ||||| | Sbjct 55213 CTTCAGATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAGGGAATCCCACCTG 55272 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 |||| ||||| | || ||||| || ||||| | || ||||| | || ||| |||| | Sbjct 55273 ATCAACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGACT 55332 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| ||||||| ||||||||| |||| | || | ||||| | |||||| Sbjct 55333 ACAACATTCAAAAAGAGTCTACTTTACATTTAGTATTGAGGCTCAGAGGTGGT 55385 Score = 152 bits (168), Expect = 7e-32 Identities = 173/232 (75%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| || || || || || | || ||||| |||||||| | || ||||| Sbjct 55381 GTGGTATGCAGATTTTCGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAAC 55440 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| ||||| || || | || || |||||||| ||||||||||| || ||||| | Sbjct 55441 CTTCAGATACAATTGAGAATGTTAAGGCAAAGATTCAGGATAAGGAAGGAATCCCACCTG 55500 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 |||| ||||| | || ||||| || ||||| | || ||||| | || ||| |||||| Sbjct 55501 ATCAACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATT 55560 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| ||||||| ||||| ||| ||||| | || | || ||| | || || Sbjct 55561 ACAACATTCAAAAAGAGTCCACTTTACACTTAGTCTTGAGACTTAGAGGCGG 55612 >seq153 Length=380987 Score = 123 bits (136), Expect = 3e-23 Identities = 1152/1831 (63%), Gaps = 50/1831 (3%) Strand=Plus/Plus Query 77870 GACTTTGAATTTGGGTATTTTGGATTGAAGACTCTCGAAAAAAGTTACCTGCAGTACATG 77929 || ||||||| || ||||||| || || ||||| |||| | || || | | || Sbjct 232123 GATTTTGAATATGATTATTTTGCCTTCAAAACTCTAGAAAGATCCTATCTTCTTAAAATT 232182 Query 77930 GATGGAAAGCTCATGGAGACACCTCAATACTTATTCATGCGTGTTTCTATTGGTATTCAT 77989 || || | |||| | ||| ||| | | | ||||| |||||| |||||||||| Sbjct 232183 GACAACAAAGTTGTGGAAAGACCACAACATCTTCTGATGCGGGTTTCTTGTGGTATTCAT 232242 Query 77990 GGAAATGATATTCCAGCGGTACTTGAAACGTATGATAAAATGTC-CAATGGTATGTTTAT 78048 | ||||||| ||| | ||||||||| ||||| | || ||| ||| |||| Sbjct 232243 TGTGGTGATATTGAAGCTGCACTTGAAACATATGAGTTGTTATCGCAAAAATAT-TTTAC 232301 Query 78049 TCACGCAACACCTACTTTGTTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTT 78108 ||| |||||||| || | |||||| |||| || || || || || |||||||||||||| Sbjct 232302 TCATGCAACACCCACACTCTTTAATTCAGGCACGCCGCGACCTCAAATGTCATCTTGTTT 232361 Query 78109 CCTACTTGCAAATAAGGAGGACTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGC 78168 |||| | | || || || || || ||||| | | || || || | || || Sbjct 232362 TTTACTCAGGATTCCAGAAGATTCAATAAACGGTATCTTTGACACACTAACTAAATGCGC 232421 Query 78169 TCAGATTTCTAAGTGGGCTGGTGGTATAGGTCT-TCA-TATTCACGATGTTCGTGCAAAC 78226 | ||| |||| || ||||| | || | || || | || || | | ||| Sbjct 232422 AAACATTAGTAAGACTGCAGGTGGCCTTGGGGTGGCAGTAAGTA--ATATTAGAG-GAAC 232478 Query 78227 AAGTCCA-GGATTAGAGGAACTAATGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGT 78285 || || ||| ||||||| ||||| ||| ||||| | ||||| ||||| | || Sbjct 232479 TGGTTCATATATTCGAGGAACAAATGGGAGATCTAATGGATTAATTCCGATGCTGCGCGT 232538 Query 78286 ATTCAATGCTACAGCACGCTATGTCAACCAAGCGGGTCGTAGG----AAGGGGTCATTCG 78341 | |||| || || | ||| | | |||| || | | | |||| | |||| | Sbjct 232539 TTATAATGACACTGCTAGGTATATTGATCAAGGTGGAGGGAAGCGTAAAGGTGCCATT-G 232597 Query 78342 CTATGTACCTTGAACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACC 78401 | || || | ||||| ||||||| ||||| | || ||| | ||| || | || | Sbjct 232598 CAATTTATTTGGAACCATGGCACGTTGATGTTGTAGAGTTTATTGAAATTAGGAAGAATC 232657 Query 78402 AGGGTGACGAGGAAGCTCGATGCAGGGATTTATTCACTGCTATGTGGATTCCGGATCTTT 78461 | || | || || |||| | ||| | || |||| | ||| |||| ||||| | Sbjct 232658 ATGGAAAGGAAGAGATGAGATGTCGCGATCTCTTTCCTGCCCTTTGGGTTCCTGATCTGT 232717 Query 78462 TTATGAAGAGAGTTGAGGAAGGAGGTA-AATGGTCTCTTTTCTGTCCAGATAAGACTAAG 78520 | ||| | |||||||| |||||| | | ||| |||| | || |||||| | | || Sbjct 232718 TCATGGAAAGAGTTGA-GAAGGATCAAGATTGGACTCTAATGTGCCCAGATGA-ATGCAG 232775 Query 78521 GGTCTTTC-AGATGTATACGGGGAAGAATTCGAAAAATTGTACACTAAATACGAAGAGGA 78579 || || | |||||| | || || || || | || | || | || || | | Sbjct 232776 GGGATTGCAAGATGTTTGGGGCGATGATTTTAAGAAGCTATATGAAGAGTATGAGAAACA 232835 Query 78580 AGGTCTCGCTATTAAGACAATTGATGCATCTGAACTATGGAAAGCTATTATCAAAAG-TC 78638 ||| | | | || || || | || |||| ||| || | | | | | || Sbjct 232836 AGGCCGTGGAAGGAAAACGATGAAAGCGCAGAAACTTTGG-TTCTTAATCTTACAGGCTC 232894 Query 78639 AAACAGAGACCGGCACCCCGTATATGCTATACAAAGACAGCTG-TAACAGAAAGTCTAAC 78697 ||| ||||| || || || | ||| || ||||| |||| || || || |||| Sbjct 232895 AAATTGAGACGGGGACACCATTTATTTGTTATAAAGA-TGCTGCAAATAGCAAAAGTAAC 232953 Query 78698 CAAAAGAACCTAGG---TGTCATCAAAAGCTCTAACCTTTGCACAGAAATTCTGGAATAC 78754 || || || | || | | | ||| |||| | ||||||||||| | |||||| Sbjct 232954 CAGAAAAATTTGGGAACTATTGTTTCAAG---TAACTTATGCACAGAAATCATAGAATAC 233010 Query 78755 ACGGATAAGAATGAAACAGCTGTATGTAATCTAGGGTCTATCGCTCTACCAAAGTTTGTT 78814 || ||| | ||| || || |||||||| | |||||| | || |||||||| ||| Sbjct 233011 ACTAGCAAGGACGAAGTTGCCGTTTGTAATCTGGCGTCTATTGGCCTTCCAAAGTTCGTT 233070 Query 78815 GATCGAGAATTA-AAGACATTTGATTATTCAAAGCTCCACGAAATTACAAAAATCGTAAC 78873 ||| | ||| | ||||| ||||||| | ||| | | ||| |||| || | | || Sbjct 233071 GAT-AAAAATAACAAGACGTTTGATTTTGATAAGTTAAAAGAAGTTACGAAGGTGATTAC 233129 Query 78874 TAAAAATTTAAATCGTGTAATTGACCGTAACTACTA-CCCAGTCGAGACTGCTAAATATT 78932 | ||||| ||| | |||||| | || || | | ||| || || | | | Sbjct 233130 GAGGAATTTGAATAAATTGATTGACGTTGGATATTATTCTCTTAAAGAATG-TACAAACT 233188 Query 78933 CTAATATGAAACATAGACCAATTGGTCTAGGTGTTCAAGGATTGGCAGA-TGTATTCAAC 78991 | ||| | | |||| | ||| | || | || ||||||| | ||||| ||| |||| Sbjct 233189 CGAATTTAAGACATCGTCCATTGGGGATTGGCATTCAAGGGCTCGCAGACTGT-TTCATG 233247 Query 78992 TTGTGTGGTCTTCCCTTCGATTGCGAAGATTCAAGGACTATGAATGCTCATATTTTCGAG 79051 || | || | || | ||| | || | | | || | ||| || || || || Sbjct 233248 ATGCTTCGTATGCCATACGAGTCTGAGGGAGCTAAGAAGTTAAATAAACAAATCTTTGAA 233307 Query 79052 ACTATTTATCATGCAGCTTTAGAAGCAAGTTCAGAACTTGCTGAAATTAATGGGCCTTAT 79111 ||| ||| |||||||| | || || || | || ||||| |||| |||| || || Sbjct 233308 GTTATCTATTATGCAGCTCTCGATGCTAGCTGTGAGCTTGCAGAAAAATATGGTCCATAC 233367 Query 79112 GAGAGTTTCGAGGGTTCACCCGCTTCACAAGGTCTTCTTCAACCAGATCTATGGGAAGGT 79171 || | | ||||| || || | ||| || | ||| ||| | |||| || | Sbjct 233368 GAAACATATTCCGGTTCGCCTGCGAGTAAGGGTATTTTACAATTTGATATGTGGGGAGTT 233427 Query 79172 GAAGCTAAATACAGTGGTCGTTACGATTGGGATGCAATGAGAAAGCGTGTAATGACGA-- 79229 | | | || ||| | || ||||||||| | | |||| | | | | | Sbjct 233428 ACACC---AGACTCTGGACTTTGTGATTGGGATTCGCT--TAAAGATAGGATTTCCAAAT 233482 Query 79230 AGGGTCTGAGAAACAGTCTTCTCGTAGCACCAATGCCCACTGCTTCGACGGCTCAGATCC 79289 | ||| | | || ||| | || | |||||||| || || || || | || || Sbjct 233483 ATGGTATTCGTAATTCTCTATTGATATCTCCAATGCCAACAGCATCCACTTCACAAATTT 233542 Query 79290 TCGGTAATAATGAGTGTTTTGAACCATACACTACAAACATATATCTTCGTCGCACATTAG 79349 | ||||| |||||| ||||||| |||| ||| | ||||| |||| |||| | | || Sbjct 233543 TAGGTAACAATGAGAGTTTTGAGCCATTCACCTCGAACATTTATCATCGTAGGGTACTAT 233602 Query 79350 CTGGTGAATTTGTTGTGGTTAACAAACATCTTGTTGAA-GATTT-GAAGAAGTTAGGTCT 79407 ||||||| || |||| || || || |||| | || ||||| ||| || ||| Sbjct 233603 CTGGTGAGTTCTTTGTAGTAAATCCGCA-CTTGCTAAATGATTTACTAGAGCTTGGGTTA 233661 Query 79408 TTGGTCAAAAGAGATGAA--AGACT-TAATGGTCAAAGCCGGAGGGAGTGTGCAAAACAT 79464 | || | || | | || ||| | | || | |||| || ||| | ||||| || Sbjct 233662 TGGGATGATAG-GCTTAAGCAGAATATTATTG-CAAA--TAATGGCAGTATTCAAAATAT 233717 Query 79465 AGTAGAGATACCAGATAATATTAAAAATCTTTATAAGACTGTTTGGGAAATTAGCCAAAA 79524 | | || || || |||| | |||||||||||||| |||||||| | ||||| Sbjct 233718 ACTTACAATTCCGGAGGATATACGTGAGCTTTATAAGACTGTATGGGAAATCAAGCAAAA 233777 Query 79525 ATGTATTATCGACATGGCAGCGGACAGGGGTCGTTTTATCTGTCAATCACAATCTATGAA 79584 | || || ||||| || || ||||||| | | | |||||||| |||||| |||| Sbjct 233778 GACAGTAATTGATATGGCTGCAGATAGGGGTCCATATGTTTGTCAATCGCAATCTTTGAA 233837 Query 79585 TTTGTTTTTAGAGTCACCTACAATTGGAAAAATATCCTCTATGCACATGTATGCGTGGAA 79644 | | | || ||| ||| ||| |||| |||||||| | |||| ||||| Sbjct 233838 CATCCATATGGAAAATGCTAACTTTGCAAAGTTATCATCTATGCATTTTTATGGTTGGAA 233897 Query 79645 GTCTGGACTCAAGACAGGTATGTACTACTTG 79675 || || || ||||| || || || ||| Sbjct 233898 AAAAGGTCTAAAAACAGGCATTTATTATTTG 233928 >seq31 Length=60375 Score = 105 bits (116), Expect = 9e-18 Identities = 201/296 (68%), Gaps = 0/296 (0%) Strand=Plus/Plus Query 196454 GATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTT 196513 |||||| || |||| || ||| ||||| |||| | ||| ||||||| |||||| ||| Sbjct 46883 GATCTTTTGTTACTCGACGTTACACCCTTATCTTTAGGTATTGAAACTTTGGGTGGAGTT 46942 Query 196514 ATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCA 196573 | ||| | | ||| | || || || || || || ||||| ||| ||||| || || Sbjct 46943 TTTACTCGATTAATTAACAGAAATACCACAATACCCACTAAAAAGAGCCAAGTATTCTCC 47002 Query 196574 ACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGT 196633 || | | || |||||| | ||| ||| |||| | |||||||| | | Sbjct 47003 ACTGCTGCAGACAATCAAACTCAAGTTGGAATTAAAGTTTTCCAAGGAGAAAGAGAATTT 47062 Query 196634 GCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGA 196693 || ||||| | | |||||| || || ||| ||| ||||| | ||||||||| Sbjct 47063 GCTGCTGATAATAAGTTGCTTGGACAATTTGAAATGATGGGAATTCCTCCAGCACCCAGA 47122 Query 196694 GGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGT 196749 || ||||| || ||| | || ||| ||||| || |||||||||||| | || || Sbjct 47123 GGGGTTCCTCAAATTGAAGTCACCTTTGATATTGATGCAAATGGAATTATGAATGT 47178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657861117168320