Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001593475.1_202016-03- 17] 156 sequences; 9,156,091 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq127 114 2e-20 >seq127 Length=123656 Score = 114 bits (126), Expect = 2e-20 Identities = 269/401 (67%), Gaps = 24/401 (6%) Strand=Plus/Plus Query 165951 TTAAGGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAGCATGGTGAA- 166009 |||| ||||| |||||| ||| |||||||| ||||| | | |||| | ||||| ||| Sbjct 2704 TTAAAGTTGCACAATTAGCTGGTTATGTTGCTGAACATAGTGCTTATCATCATGGAGAAT 2763 Query 166010 CAAAATTT--ATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATA 166067 || ||| | || ||||| |||| | || ||| |||||||||| | |||||| Sbjct 2764 CATCATTACAAAGT---ACTATTGTTAATATGGCTCAAAATTTTGTTGGAAGTAATAATC 2820 Query 166068 TAGCATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTC-- 166125 || | | ||||| |||||||||||||| ||| |||||| || |||||| | Sbjct 2821 TAAATCTGTTAGAACCATGTGGTCAATTTGGTAGTAGAAAAGAAGGTGGAAAAGATGCAA 2880 Query 166126 -TGCTGCATCAAGATATATTTATACCAAACCACATAAAATATTAAAATATATATTTAGAG 166184 |||||| || | ||||| | ||| || | | |||| | |||||| || || Sbjct 2881 GTGCTGC-TC--GTTATATATTTACTAAGCTATCTAAATGGACTAGATATATTTTCCCAG 2937 Query 166185 AAGAAGATGACCCTATTTTAAATTAT---ACTGTTGAGGG---------TGAACCTATTC 166232 | | ||||| ||| | |||| |||| || ||| || ||||||| | Sbjct 2938 AGGCTGATGATCCTTTATTAACTTATTTATATGATGATGGACAACAAATTGAACCTTTAT 2997 Query 166233 ATTTTATTCCAGTAATCCCATTAATTTTAATTAATGGTTCTATTGGTATTGGAACAGGAT 166292 ||| | ||||| |||| ||| | ||||| | |||||| || ||| ||||| ||||| | Sbjct 2998 ATTATGTTCCAATAATTCCAATGATTTTGGTAAATGGTACTGATGGAATTGGTACAGGTT 3057 Query 166293 GGTCATGTTTTATACCTCAATATAATCCTTTAGAATTAATT 166333 || ||| | ||| | |||||||| ||| ||||| Sbjct 3058 GGAGTAGTTCAGTTCCTAACTATAATCCAAAAGATATAATT 3098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632488366645280