Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001593475.1_202016-03- 17] 156 sequences; 9,156,091 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq139 87.8 3e-12 >seq139 Length=542781 Score = 87.8 bits (96), Expect = 3e-12 Identities = 96/130 (74%), Gaps = 11/130 (8%) Strand=Plus/Minus Query 81653 TCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA-----------CAAAG 81701 |||||||| ||||| || |||||||||||||||| ||||| || ||||| Sbjct 271470 TCCTTCTGGATATTGTAGTCAGATAGAGTTCTACCATCTTCCAATTGCTTTCCAGCAAAG 271411 Query 81702 ATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCTTTTATATTT 81761 || || | |||||| | ||| | || | |||||||| || |||||||| |||| ||| Sbjct 271410 ATCAGACGCTGTTGATCAGGAGGAATGCCCTCCTTATCCTGGATCTTTGCCTTTACATTC 271351 Query 81762 TCAATCGTAT 81771 ||||| |||| Sbjct 271350 TCAATAGTAT 271341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903409438348160