Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F002223825.1_202015-12- 11] 12 sequences; 9,068,851 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq2 565 2e-155 seq11 262 3e-64 seq3 147 2e-29 seq4 118 8e-21 seq10 86.0 5e-11 >seq2 Length=988320 Score = 565 bits (626), Expect = 2e-155 Identities = 1078/1570 (69%), Gaps = 32/1570 (2%) Strand=Plus/Plus Query 517162 AGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAAT 517221 ||| || ||| ||| | ||||| | || | || ||||| || || |||||||| Sbjct 97735 AGCATCATTAACCATACGTTCAATATCGTCCTTTGATAATCTACCCTTATCGTTAGTAAT 97794 Query 517222 AGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATT 517281 ||| || || || || || ||||||| | |||| ||||| | |||||||| Sbjct 97795 AGTGATCTTGCTGCTCTTACCAGTGCTTTTATCAACAGCAGATACATTCAAGATACCATT 97854 Query 517282 GGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCC 517341 ||||| | |||||| |||||||||||||| || || ||||| | || ||||| || || Sbjct 97855 AGCATCAATATCAAAAGTGACTTCAATTTGTGGTACACCTCTTGGTGCTGGTGGAATACC 97914 Query 517342 TTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAA 517401 || | || || |||| || || ||||| ||||| | || |||||||| | Sbjct 97915 ATCAAGATGGAACTTTCCAAGGAGATGGTTATCCTTAGTCATGGCTCTCTCACCCTCATA 97974 Query 517402 AATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTC-TGGATTTTT 517460 || |||||| || | | || ||||| | |||||| || || ||| || || || Sbjct 97975 AACTTGGATCAAGACACCGCTCTGGTTATCAGCATAAGTAGTGAAGACTTGTGTCTTCTT 98034 Query 517461 TACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTA 517520 | | ||| | ||||| || | ||||||| |||||||||| |||||| || ||||||| Sbjct 98035 TGCTGGGA-TAGTTGTATTACGTTCAATAAGCTTGGTCATAACACCACCAGCAGTTTCTA 98093 Query 517521 AACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTT 517580 |||| || || | |||| ||||| | || | | || || | || | || Sbjct 98094 AACCGAGTGATAATGGAGCAACATCCAATAATAAGAGATCCTGTACGG---CAGAGGATT 98150 Query 517581 GACCAACA---AGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGAT 517637 | || || | ||||| ||||| | |||||||||||| |||||||||||||| |||| Sbjct 98151 GCTCACCATTTAAGATAGCAGCTTGTACAGCAGCACCATAAGCAACAGCTTCATCTGGAT 98210 Query 517638 TAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT--TGAAAGAAGTTGTCTTA-CCT 517694 | | | || | | | |||||| || ||| |||| |||| ||| | || | ||| Sbjct 98211 TGATTGCTTTGCATGGCTCTTTACCGTT-AAAGAATTCCTGAATCAAG--GCCTGAACCT 98267 Query 517695 TAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTT 517754 | |||||||| | || || ||||| ||||||| ||||| || | || |||| Sbjct 98268 TTGGAATACGTGTAGAACCACCAACCAATACAACATCATGTACAGATCTCTTGTCCATAC 98327 Query 517755 TTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAA 517814 | |||| | ||||| ||||| || | | | || | || | || | || | Sbjct 98328 CAGCATCCTTGAGTACTTTCTCAACTGGAGCTAAAGTTGCACGGAAGTAATCAGCGCAGA 98387 Query 517815 GTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAAT 517874 ||||||||||| | |||||| | | | || ||||||||| || || | | |||| Sbjct 98388 GTTCTTCGAATCTGGCTCTACTGATGGCAACTGAATAATCAATACCCTCATAGAGTGAAT 98447 Query 517875 CAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTG 517934 | | ||||| |||| |||||| ||||| || | | | || ||||| |||||| | Sbjct 98448 CTAACTCAATTGTAGCTTGAGTAGAAGATGACAAAGTTCTCTTTGCACGCTCACATTGAG 98507 Query 517935 TCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGT---TTTATATTTTCTCT 517991 | || ||||||| ||| ||| | || | | | ||||| | | ||| ||||||| Sbjct 98508 TTCTGAGTCTTCTTAAAGCTCTAGCATTTGAAGTTAAATCCATACCTCTATTCTTTCTCT 98567 Query 517992 TGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAG 518051 ||||||||| ||||| || || || | ||||||||||||||||| ||||| | || Sbjct 98568 TGAAATCTTGTACACAGAATTCCACGAGTCTGTTATCAAAATCTTCACCACCCAAGTGAG 98627 Query 518052 TATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACAT 518111 ||| || | |||||| | |||| |||| |||||||||| || || | | ||||| Sbjct 98628 TATCACCAGCGGTAGCTTTAACTTCAAAAATACCATCTTCAATAGTTAATAATGATACAT 98687 Query 518112 CATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTC--TTGGTTT-T 518168 || || |||||||| | ||| || || | |||||| | || | | || ||| | Sbjct 98688 CAAAAGTACCACCACCTAAATCGAAGATCAATACATTTCTCTC---GCCAGTTCCTTTCT 98744 Query 518169 TATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAA 518228 ||||||||||||| |||| |||||| |||||||| || ||||| ||||||| ||||| | Sbjct 98745 TATCAAGACCATAAGCAATAGCAGCTGCAGTTGGCTCGTTAATGATTCTCATTACATTCA 98804 Query 518229 GACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAG 518288 |||||||||| |||||||| || || ||||| | |||||| || || ||||| || | Sbjct 98805 AACCAGCAATTGCACCTGCATCCTTTGTTGCTTGACGTTGTGAGTCATTGAAATAAGCTG 98864 Query 518289 GAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCA 518348 ||||||||| || |||| | | || ||| | || || | ||| |||| Sbjct 98865 GAACAGTAACTACAGCATTCTTAATTTGGCGACCCAAGTATGCTTCAGAGATTTCCTTCA 98924 Query 518349 TTTTACTTAAAATCATTGATGAAATTTGTTCTG--GGGAATATTGCTTGGATTCATTTTG 518406 | || ||||| ||| | ||||||| ||| | ||| ||| ||| |||| | Sbjct 98925 TCTTTTGTAAAACCATAGCAGAAATTTCTTCAGCATGGA--ATTCCTTCTTTTCACCTAA 98982 Query 518407 ATATGATAC-TTCAAAATATGGTTTA---TTACCAACATTAATAACTTTAAATGGCCAGT 518462 || ||| | | || ||| ||| || | | ||| |||||||||||||||| Sbjct 98983 GTAGTTTACACTGATGAT-TGGCTTATCCTTTGGACCTCTAACTACTTTAAATGGCCAGT 99041 Query 518463 ATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCAT 518522 ||||||| ||| || || |||| ||| | ||||||||| | ||||| |||| Sbjct 99042 GAGTCATATCACTTTGTACTGCCTGATCATCAAACTTTCTACCAATAAGACGTTTAGCAT 99101 Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 |||||| || || |||||| | ||| |||||| || |||||||| ||||| ||| Sbjct 99102 CAAAAACTGTGTTTTCTGGATTTCTAGCAACTTGATTCTTTGCTGCATCACCAATAAGAC 99161 Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642 | || || || ||||||| ||||||||||| ||||| || ||||||||||| || | || Sbjct 99162 GCTCAGTTTCAGTAAATGCTACATATGATGGTGTTGTACGGTTACCTTGATCGTTTGGAA 99221 Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702 ||| || || || | ||| ||||||||| ||||| | || || |||||||||| Sbjct 99222 CAATATCTACAGTATCGTTTCTCCATACACCAACACATGAGTATGTGGTACCTAAATCAA 99281 Query 518703 TACCAATAGC 518712 |||||||||| Sbjct 99282 TACCAATAGC 99291 Score = 102 bits (112), Expect = 6e-16 Identities = 204/300 (68%), Gaps = 17/300 (6%) Strand=Plus/Plus Query 322085 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCTA-ATGTTCTAAATACTCC 322143 ||||||||||| || ||||| || |||| |||| | ||| | ||| ||| | || Sbjct 98603 TCAAAATCTTCACCACCCAAGTGAGTATCACCAGCGGTAGCTTTAACTTCAAAA-ATACC 98661 Query 322144 ATTTGAGATATTCATTAACGAAACATCTAAAGTCCCAGCTCCTAAGTCATAAACAATTAC 322203 || | ||| | | ||| || ||||| ||||| ||| | ||||| || | | | ||| Sbjct 98662 ATCTTCAATAGTTAATAATGATACATCAAAAGTACCACCACCTAAATCGAAGATCAATAC 98721 Query 322204 GTTAC---CACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGC 322260 || | | |||||| ||| || ||| | ||| || |||| ||| || Sbjct 98722 ATTTCTCTCGCCAGTTCCTTTCTTA------TCA------AGACCATAAGCAATAGCAGC 98769 Query 322261 TGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAG 322320 ||||||||| || ||||| ||| | | |||| ||||| |||||| | | | ||| Sbjct 98770 TGCAGTTGGCTCGTTAATGATTCTCATTACATTCAAACCAGCAATTGCACCTGCATCCTT 98829 Query 322321 AGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTATTAAT 322380 |||||||| | |||| |||||| ||||| ||||| ||||||| || || || ||||| Sbjct 98830 TGTTGCTTGACGTTGTGAGTCATTGAAATAAGCTGGAACAGTAACTACAGCATTCTTAAT 98889 >seq11 Length=1268624 Score = 262 bits (290), Expect = 3e-64 Identities = 1025/1586 (65%), Gaps = 43/1586 (3%) Strand=Plus/Minus Query 517139 TTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAG 517198 || ||| |||| |||||| | ||| || ||||||| | ||| || | || | ||| Sbjct 82499 TTGTCTTCTTCGGCAAATTGCTCAGCCTCCTTAATCATACGCTCTATGTCTTCCTGTGAG 82440 Query 517199 AATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCG 517258 | ||| || || ||| || |||||||| |||| |||||| || ||||| Sbjct 82439 AGTCTACCCTTATCATTTGTGATAGTAATCTTCTCGGATTTACCAGTACCCTTATCCTTT 82380 Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 ||| | || | | |||||||| | ||| | ||||| || || |||||||| || || Sbjct 82379 GCACTAACTTGTAAAATACCATCAGTATCAATTTCAAAAGTAACCTCAATTTGGGGAACA 82320 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 ||||| |||| |||||||| || | | ||| |||| || || ||||| ||| Sbjct 82319 CCTCTTGGAGCTGGTGGGATTCCAGAAAGCTCGAATTTTCCGAGGAGGTTGTTATCCTTA 82260 Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT---TGATTATCTGAA 517435 || | | || |||||||| ||| |||||| | ||||| | ||||||||| Sbjct 82259 GTCATTGGACGCTCACCCTCATAAACCTGGATA---AGTACAGCTGGCTGATTATCTTGG 82203 Query 517436 TAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATT 517494 ||||| | || ||| ||| | || || |||| ||||||||| |||| | || Sbjct 82202 TAAGTACTGAAAACT-TGGCTCTTCTTGGTTGGAACAACAGTGTTTCTACCAATGAGCTT 82144 Query 517495 GGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGAC 517554 ||||||| ||||| | || || | ||| | || | |||||| ||||| | || | Sbjct 82143 TGTCATAACTCCACCAACAGTCTCAATACCTAAAGTTAAAGGAGTAACATCCAATA--AT 82086 Query 517555 AATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACC 517614 |||| || | | || || ||| | | ||| | ||||| | |||||||| Sbjct 82085 AATA-----AATCACTACCTCC--TTCACCTGCTAAGATACCAGCTTGTACGGCAGCACC 82033 Query 517615 ATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT- 517673 ||| || || |||||||| || |||| | ||| | | || |||| || || | Sbjct 82032 ATAAGCGACGGCTTCATCTGGGTTAATTCCTCTGTTTGGCTCCTTTCCATCAAAGAACTC 81973 Query 517674 -TTGAAAGAAG-TTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTC 517731 |||| | | ||| | |||||| ||||||| || || || || || || || || Sbjct 81972 CTTGATCAAGGCTTGAAT---CTTAGGGATACGAGTAGAACCACCTACCAAAACGATCTC 81916 Query 517732 ATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACC 517791 || || | || || | | | | |||| ||||| || | ||| || || | | Sbjct 81915 ATCTACTTCAGACTTTTTGATTCCAGCATCCTCCAAAACCTTCTTAACTGGCTCGATAGT 81856 Query 517792 CGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATA 517851 | ||| |||||||| | | | || ||||| |||||||| || | || | | Sbjct 81855 CTTTCTGAACAAGTCAGCATTCAACTCGTCGAACTTAGCTCTGGTCAAGGTTTCGCTCAG 81796 Query 517852 ATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGC 517911 ||| | | || | |||| |||| || | | || ||| | | ||||| || || Sbjct 81795 ATCTACATCCTCCATCAAACCTTCAATCTCGACCTTAACTTGTGGAGCTGAAGAAAGGGC 81736 Query 517912 ACGTTTAGCACGTTCACATGCTGTCCT-TAGTCTTCGTAAGGCTTTTGCTGATTGA-TTC 517969 | || | || ||| | || || | || |||| |||| | | || || || Sbjct 81735 TCTCTTCG-AC-TTCTCGACCTCTCTTCTAAGCTTCTGAAGGGCTCTCTTGTCAGACTTT 81678 Query 517970 AAATCTGTTTTATAT-TTTCTCTTGAA-ATCTTCAACACACCATGTTACAAGACGATT-- 518025 | ||| ||| | | ||| ||||| ||||| | | || | || || | Sbjct 81677 ACATCC-TTTCCTGTCTTTGACTTGATGATCTTGATAAAG---TGGTCCATAACTCTCTG 81622 Query 518026 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 518085 ||| ||||| ||||||||||| | |||| || ||||| || | ||||| || Sbjct 81621 ATCGAAATCCTCACCTCCCAAATGGGTATCACCACTTGTAGCAACGACCTCGAAAACGCC 81562 Query 518086 ATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 518145 | |||| | ||| |||| |||||| || |||||||||| ||| | | | | Sbjct 81561 GTTATCAATGGTCAAGAGAGAAACATCAAAAGTACCACCACCCAAATCGTATACTA--AA 81504 Query 518146 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 518205 || | |||| | ||| | ||||| | |||| | |||| || || || ||||| || Sbjct 81503 ATGCTCTTCTCAG-CTT---TCTTATCCAAACCAAAAGCAATTGCTGCTGCTGTTGGCTC 81448 Query 518206 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 518265 ||||||||| | | ||||| | ||||||||| || ||||| || || || || | Sbjct 81447 ATTAATAATACGGATTACATTCAAACCAGCAATAGCACCAGCATCCTTGGTAGCCTGACG 81388 Query 518266 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAAT 518325 || | ||| ||||| || || || |||||||| || |||| ||||||| ||||| | Sbjct 81387 CTGAGCATCATTAAAGTAAGCTGGGACAGTAATTACTGCATGCTTTACTTCCTTACCGAG 81328 Query 518326 ATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGA 518385 |||||| || ||| |||||| || || | ||| | |||| | |||||||| Sbjct 81327 ATAAGCCTCAGCAATTTCTTTCATCTTGAGCAAGACCATAGCGGAAACCTCTTCTGGGGC 81268 Query 518386 ATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAAT 518445 ||||||| ||| | | || |||| | || || || || | ||||| Sbjct 81267 TAATTGCTTCTTCTCACCCTTAACAGAAACTTGTATGTAAGGCTTGCTATCTTTGTTAAT 81208 Query 518446 AACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACC 518505 || | | |||| | | || |||| ||| ||| | || |||||| | ||| Sbjct 81207 AATCTCATATGGTAACAAAGTCTTATCCTTTTGGACAGAATCATCCTTAAAACGACGACC 81148 Query 518506 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGC 518565 ||| | || ||| | || || | ||| | |||||| || | |||||||| ||||| Sbjct 81147 AATAAGTCTCTTTACGTCGAACAAAGTCTGAACTGGATTGATAGTAGCTTGATTCTTGGC 81088 Query 518566 TGCATCTCCAATCAGATGT-TCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGAT 518624 || || ||||||| || | || || || ||||| ||||||||||| || | |||| Sbjct 81087 TGATTCACCAATCA-ATCTCTCATCATCAGTGAATGATACATATGATGGTGTAATACGAT 81029 Query 518625 TACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAA 518684 ||||||| ||||| | |||||| || ||| ||||||| | | | ||| ||||| | Sbjct 81028 TACCTTGTTCATTTGGAATAATCTCTACTCTACCATTCTTGTAGATACCAACACATGAAT 80969 Query 518685 AAGTTGTTCCTAAATCAATACCAATA 518710 |||| || |||||||| ||||||||| Sbjct 80968 AAGTAGTACCTAAATCGATACCAATA 80943 Score = 109 bits (120), Expect = 4e-18 Identities = 320/483 (66%), Gaps = 24/483 (5%) Strand=Plus/Plus Query 303735 AAGTCCACCATCTCTTGATCTACCTTCTGGCGCTTGTCTTGTAAGTAACTGTGT-TGGTC 303793 ||| || || || |||| ||| |||||| | |||||| || || | |||| || || Sbjct 826736 AAGCCCTCCTTCCCTTGCTCTTCCTTCTCTTGGTTGTCTGGTTAGCAT-TGTGACTGCTC 826794 Query 303794 CACGAGCGCGTGAGTGGGCCTTGTCGCCTACCATTTGTTTCAATCTCTGATAATATGTCG 303853 | | ||| | | || || ||| | ||||| ||||| | ||||||||| || || | Sbjct 826795 CTCTAGCTCTAGCATGAATTTTATCGTCAACCATATGTTTTAGTCTCTGATAGTAAGTTG 826854 Query 303854 GACCAATAAAAATTTTA-ACTGGTAATTTTTTACCATTCATTCCATTATACATAGTTTCA 303912 | |||||||| ||| | ||| ||| | || || | ||||| ||||| |||| Sbjct 826855 GCCCAATAAAGATTCTCGACTCC-AATCTCTTTCCCGTATGGCCATTGTACATTACTTCA 826913 Query 303913 TTACCCCATTCTTCATAACCAGCAGCAACTAATTCATCGT-TA---ATGGCATTAAGATC 303968 || || ||| ||| || | | | ||||| | | || || || | | || Sbjct 826914 TTTCC--ATTTTTCTGAAAC--CCGGAACTATGTAAACGGCTAGATATCTCTTCAACTGT 826969 Query 303969 AACACTTGTAAATGGTGTTGCATCGCCATACACTCCTTTAACTGCACATAGTTTTCCTAA 304028 || | ||||| || ||||||||||| | || ||||| || ||| || ||| || | Sbjct 826970 AATTTTCGTAAAAGGAGTTGCATCGCCCTCCAATCCTTGAATTGCGCACGCTTTGCCAAG 827029 Query 304029 TAAACATTCAATAAGTTGCCCAATAGTCATACGTTTGGGCATACAATTAGGATTGATAAT 304088 || ||||||||| | || ||||| |||||||| || ||| || |||||| ||||| Sbjct 827030 TAGACATTCAATTAAATGGCCAATTGTCATACGCGAAGGAATAGCATGAGGATTCATAAT 827089 Query 304089 AATATCGGGAATTAATCCAGATTTACTGAATAACATATCTGCTCGATGAGCTTTGTAT-- 304146 ||| || ||||| | ||| || | ||| |||||| ||| || | ||||| Sbjct 827090 AATGTCTGGAATAATCCCATCTTGTGTAAATGGCATATC--CTC----AGTTCTGTATGT 827143 Query 304147 ----CCAATGGTACCTTTTTGACCTGCTCTTGACGAAAATTTATCACCTACATTGGGAAT 304202 || || ||||| ||||| || ||| || | ||| ||||| || |||| || || Sbjct 827144 TATACCGATTGTACCCTTTTGGCCATGTCTAGATGCAAACTTATCTCCAACATGAGGTAT 827203 Query 304203 TCT 304205 ||| Sbjct 827204 TCT 827206 >seq3 Length=1102581 Score = 147 bits (162), Expect = 2e-29 Identities = 337/493 (68%), Gaps = 27/493 (5%) Strand=Plus/Plus Query 517155 ATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTAT 517214 |||||| ||||||||| |||||| ||||||||| | | || | | ||| || || Sbjct 859935 ATTCTTCAGCTTCTCTGATCATTTTCTCAATTTCAGCACCACTTAGACCTCCA-GAAGAT 859993 Query 517215 TAGTAATAGTAATATTCTTGGATTTGTTT---GTTGATTTATCAGCGGCAGTCACATTAA 517271 | |||||| || | | || ||| ||| ||||| |||||| ||| ||||| | Sbjct 859994 TG--AATAGTGATCT-CGTG--TTTCTTTCCAGTTGACTTATCAATTGCACCAACATTCA 860048 Query 517272 GAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAG 517331 ||| ||||| ||||| | |||||| ||||||||||||||||| |||||||| | || | Sbjct 860049 TAATTCCATTTGCATCAATATCAAAGGTGACTTCAATTTGAGGAACCCCTCTGGGTGCTG 860108 Query 517332 GTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTT 517391 | || || || || | |||| ||| || |||||||| || |||| || || Sbjct 860109 GAGGAATTCCCATCATTTCAAATTGTCCAAGCAACTTATTATCAGCAGCAAATTCTCTTT 860168 Query 517392 CACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTC 517451 | || | ||||| || || |||| ||||||||| |||| | ||| | |||||| Sbjct 860169 CTCCTTGGAAAACTTTAATTCCAACTTGAGTTTGATTGTCTGCAGCAGTGGAGAATACT- 860227 Query 517452 TGGAT-TTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTG-GTCATAATACCACC 517509 ||| | |||||| || ||||| || ||||| | ||| | || | || | || ||||| Sbjct 860228 TGGCTCTTTTTAGTGGGTATTGTGGTATTTCTGTTAATTA-ATCGAGTAAAAACTCCACC 860286 Query 517510 TGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT-TTTGAAGTT 517568 ||||| | ||| | ||| | || || || || | || | || || |||| Sbjct 860287 CAAAGTTTCAATACCTAAAGATAAGGGTGTAACGTCGAGTAACAAAAGATCCTTGA---- 860342 Query 517569 TTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 517628 |||| || || ||| || | | ||||| |||||||| || ||||||||||| Sbjct 860343 TTTC-TCCCTT----CAA----AACACCAGCTTGTATAGCAGCTCCCATTGCAACAGCTT 860393 Query 517629 CATCAGGATTAAC 517641 | ||||| ||||| Sbjct 860394 CGTCAGGGTTAAC 860406 Score = 96.9 bits (106), Expect = 3e-14 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 || || |||| ||| || || ||||| |||||||| ||||| ||||| | || || Sbjct 860945 CCGTATGCAAGAGCTGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAGCCTGCT 861004 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296 || || ||||| ||||| ||||| | || ||||| ||||| || || || |||||| Sbjct 861005 ATAGAGCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTA 861064 Query 518297 ATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTT 518352 ||||| |||| |||| | |||||| ||||| || |||| ||||||||| Sbjct 861065 ATAACAGCATGCTTTACACTTCTACCAAGATAAGTTTCGGCAGTTTCTTTCATTTT 861120 Score = 96.9 bits (106), Expect = 3e-14 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 322244 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 322303 |||||||||||||||||||| ||||| |||||||| ||| | |||| ||| || || Sbjct 860945 CCGTATGCAAGAGCTGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAGCCTGCT 861004 Query 322304 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 322363 || ||| ||| ||||||||| | ||| | |||||||| || ||||| |||||| Sbjct 861005 ATAGAGCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTA 861064 Query 322364 ATAACTGC 322371 ||||| || Sbjct 861065 ATAACAGC 861072 >seq4 Length=1103974 Score = 118 bits (130), Expect = 8e-21 Identities = 334/503 (66%), Gaps = 15/503 (3%) Strand=Plus/Plus Query 636275 TATTATGATTTCATTCACAAAGAACTTATTACTTTTTCTGTGGATGACGTTCT--TAGAT 636332 |||| |||||| ||||| ||||||||| | || || || ||| | || ||||| Sbjct 213462 TATTTTGATTTTATTCATAAAGAACTTGTA--TTATTTAGTAGATATGATACTACTAGAT 213519 Query 636333 CTGTTCCTAATTTAATGGATGGATTTAAACCATCACATCGCAAAGTATTTTATGGTTCTG 636392 || |||| |||||| | ||||| || ||||| ||| | |||||| ||| || | Sbjct 213520 CTATTCCAAATTTATTAGATGGTTTAAAACCTGGACAAAGAAAAGTACTTTTTGCAACAT 213579 Query 636393 TTGAAAAGAATATTTATAAGCAAGAGATTAAAGTATCAGATTTGACTGGTTTTGTCTC-G 636451 || |||| || || |||| || ||||||| || | || |||||| ||| | | Sbjct 213580 TTAAAAAAAAGCTTAATAATGAAC---TTAAAGTTGCACAATTAGCTGGTTATGTTGCTG 213636 Query 636452 AATATGACGAAATATCATCATGGTGATCAATCATTATCATCAACTATTGTCGGAATGGCT 636511 || || | ||||||||||| || ||||||| | |||||||| |||||| Sbjct 213637 AACATAGTGCT-TATCATCATGGAGAATCATCATTACAAAGTACTATTGTTAATATGGCT 213695 Query 636512 CAAAATTATGTGGGAAGTAACAATCTCAATTTGTTAATGCCATTGGGAATGTTTGGATCT 636571 ||||||| ||| |||||||| ||||| ||| ||||| |||| || ||||| | Sbjct 213696 CAAAATTTTGTTGGAAGTAATAATCTAAATCTGTTAGAACCATGTGGTCAATTTGGTAGT 213755 Query 636572 AGATTGACCGGAGGTAAAGATTCAGCGAGTCCTAGGTATTTGAACACTAAATTAGATGAT 636631 ||| || || |||||| || | || | ||| | ||||| || | | Sbjct 213756 AGAAAAGAAGGTGGAAAAGATGCAAGTGCTGCTCGTTATATATTTACTAAGCTATCTAAA 213815 Query 636632 TTGGCAAAGAAAATCTTCATTGATTATGATTTTGATATTCTTCAACATCAGTCAGAAGAT 636691 | | | | | || ||| || |||| | | || || ||| | | | | | ||| Sbjct 213816 TGGACTAGATATATTTTCCCAGAGGCTGATGATCCT-TTATT-AAC-TTATTTATATGAT 213872 Query 636692 AATTG---TCGAATTGAACCTGTTTATTATGCTCCTATTATTCCAATGATACTTGTAAAT 636748 || | | |||||||||| | ||||||| ||| || ||||||||||| | |||||| Sbjct 213873 GATGGACAACAAATTGAACCTTTATATTATGTTCCAATAATTCCAATGATTTTGGTAAAT 213932 Query 636749 GGAGCTGAAGGAATTGGTACTGG 636771 || |||| ||||||||||| || Sbjct 213933 GGTACTGATGGAATTGGTACAGG 213955 Score = 98.7 bits (108), Expect = 8e-15 Identities = 223/340 (66%), Gaps = 33/340 (10%) Strand=Plus/Plus Query 634316 ATTACTTATGTACCTGGTCTATATAAAATTTATGATGAAGTAATTGTAAATGCGGCAGAT 634375 |||| ||||||||||||| ||||||| |||| ||||||| | | || ||||| || ||| Sbjct 211257 ATTAATTATGTACCTGGTTTATATAAGATTTTTGATGAAATCTTAGTTAATGCTGCTGAT 211316 Query 634376 CATAA--CAAGAGA-------------------------TGTCAAACATGTAATATTATC 634408 ||| | ||||| | | ||| ||||| | ||| Sbjct 211317 GTTAAAGCTAGAGAAATTTCAACTAAAAATAATCATATTTTTGAAAAATGTACTTGTATT 211376 Query 634409 AAAGTTGATATCGATC---AAAAAACAGGTCAAATTTCTGTTTGGAATAATGGTGATGGT 634465 |||||||| || || |||||| || ||||| |||| | ||| |||| || || Sbjct 211377 AAAGTTGAAATTAATAGAGAAAAAAAAG---AAATTACTGTATTTAATGATGGAGAAGGA 211433 Query 634466 ATTGATGTAGCAATTCATAAAGAACATAATATATGGGTACCATCAATGATTTTTGGAGAA 634525 || | | ||| |||| ||||||| | ||| || ||| | | ||||||||| | Sbjct 211434 ATACCAATTGAAATACATAGAGAACATCAAGTATATGTTCCAGAATTAATTTTTGGACAT 211493 Query 634526 CTTTTAACGTCTACTAATTACGATAAAAACGAGGAAAAAACTGTTGGTGGTAAAAATGGT 634585 | ||||| ||| |||||| ||| | || || || | | | ||| || | ||||||| Sbjct 211494 TTATTAACTTCTGATAATTATGATGATAATGAAGATAGAGTTACTGGAGGAAGAAATGGT 211553 Query 634586 TTTGGCGCTAAGCTTGCTAATATTTATTCTGTTGAATTTA 634625 ||||| || || ||| ||||||| | ||| ||||||| Sbjct 211554 TTTGGAGCAAAACTTACTAATATATTCTCTAAAGAATTTA 211593 >seq10 Length=1316356 Score = 86.0 bits (94), Expect = 5e-11 Identities = 127/179 (71%), Gaps = 1/179 (1%) Strand=Plus/Minus Query 668849 TTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCT 668908 |||| |||||||||||| ||| | ||||||||||||| || ||| | || ||| | | Sbjct 769756 TTAA-AGGTAAAGAAGGACGTTTCAGAGGAAATTTGAGTGGTAAAAGAGTTGATTTTAGT 769698 Query 668909 GCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTT 668968 | | | || |||||| || |||| || ||||||| | ||||||||| || ||| | Sbjct 769697 GGAAGGACTGTTATTTCTCCTGACCCTAATATTGAAGTTGATGAAGTTGTAGTACCTATG 769638 Query 668969 ATTATTGCTAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGAGTATTT 669027 || ||||| || || | |||| | ||||| || | | ||||||||| | ||| Sbjct 769637 ATCATTGCAAAGAAATTGACTTATCCCGAAAGAGTTAATGCTATTAATATTGACTCTTT 769579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780821804520472