Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F002223825.1_202015-12- 11] 12 sequences; 9,068,851 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2 423 2e-113 seq10 219 5e-52 seq11 167 3e-36 seq4 159 4e-34 seq3 104 3e-17 seq1 96.9 4e-15 >seq2 Length=988320 Score = 423 bits (468), Expect = 2e-113 Identities = 1067/1603 (67%), Gaps = 38/1603 (2%) Strand=Plus/Plus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||| ||| | || || || || ||||| | ||||| |||||| || || || ||| Sbjct 97712 TCATCCTCACCCTTGTATTTCTCAGCATCATTAACCATACGTTCAATATCGTCCTTTGAT 97771 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 ||||| |||||||| || ||||| || ||||| | ||||| | | ||||| || Sbjct 97772 AATCTACCCTTATCGTTAGTAATAGTGATCTTGCTGCTCTTACCAGTGCTTTTATCAACA 97831 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 ||| ||||||||| |||||||| ||||||| ||| || | || | |||||||||| | Sbjct 97832 GCAGATACATTCAAGATACCATTAGCATCAATATCAAAAGTGACTTCAATTTGTGGTACA 97891 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || || ||||| | ||||||||| | || || | ||||| | | ||||||| | Sbjct 97892 CCTCTTGGTGCTGGTGGAATACCATCAAGATGGAACTTTCCAAGGAGATGGTTATCCTTA 97951 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATT--GTCACCGCAGGTTGATTATCTTGTG 6866 | | | | ||||| ||||| |||| || | |||||| || ||||| Sbjct 97952 GTCATGGCTCTCTCACCCTCATAAACTTGGATCAAGACACCGCTC--TGGTTATCAGCAT 98009 Query 6867 CCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGG 6926 || | ||||| |||| ||||| | ||| || || ||||| | ||||| | || Sbjct 98010 AAGTAGTGAAGACTTGTGTCTTCTTTGCTGGGATAGTTGTATTACGTTCAATAAGCTTGG 98069 Query 6927 TCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACA 6986 |||||| |||||| |||||| | || || || | || | || ||||| | ||| | Sbjct 98070 TCATAACACCACCAGCAGTTTCTAAACCGAGTGATAATGGAGCAACATCCAATAATAAGA 98129 Query 6987 GGTCTTGAACAG-ATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045 | || || || | | | | || |||| ||||||| || ||||| || | || || Sbjct 98130 GATCCTGTACGGCAGAGGATTGCT-CACCATTTAAGATAGCAGCTTGTACAGCAGCACCA 98188 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 || || || || ||||| || || || | ||| | |||||||||||||| | ||| Sbjct 98189 TAAGCAACAGCTTCATCTGGATTGATTGCTTTGCATGGCTCTTTACCGTTAAAGAATTCC 98248 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 | || |||| || || || ||||| || ||||| ||||| || | |||| Sbjct 98249 TGAATCAAGGCCTGAACCTTTGGAATACGTGTAGAACCACCAACCAATACAACATCATGT 98308 Query 7166 ACTTTCGAT---TTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACAT 7222 || ||| || || || | || ||| ||| || || || | | | | Sbjct 98309 ACA---GATCTCTTGTCCATACCAGCATCCTTGAGTACTTTCTCAACTGGAGCTAAAGTT 98365 Query 7223 TTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGA---TGTATAG 7279 |||||| | || || ||||| || || | || | | |||| || ||| Sbjct 98366 GCACGGAAGTAATCAGCGCAGAGTTCTTCGAATCTGGCTCTACTGATGGCAACTGAATA- 98424 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 ||||| || || || | ||||| | ||||| || | ||| | | || || || Sbjct 98425 --ATCAATACCCTCATAGAGTGAATCTAACTCAATTGTAGCTTGAGTAGAAGATGACAAA 98482 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 |||| |||||| |||||||| |||| | | | | || | | || | Sbjct 98483 GTTCTCTTTGCACGCTCACATTGAGTTCTGAGTCTTCTTAAAGCTCTAGCATTTGAAGTT 98542 Query 7400 ATATCTTT--CT-TATGTTTACGTTTAAACTCTT---CAGAGAAGTGTCGAAGGAGTCTC 7453 | ||| | || ||| || | || || |||| || |||| | | |||||| Sbjct 98543 AAATCCATACCTCTATTCTTTCTCTTGAAATCTTGTACACAGAATTCC---ACGAGTCTG 98599 Query 7454 GAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATA 7513 ||| |||||||||||||||||||| ||||| || ||||| ||||| |||||||| ||| Sbjct 98600 TTATCAAAATCTTCACCACCCAAGTGAGTATCACCAGCGGTAGCTTTAACTTCAAAAATA 98659 Query 7514 CCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGT 7573 || ||||||| |||| || || |||||||| ||||||||||| | || || || | | Sbjct 98660 CCATCTTCAATAGTTAATAATGATACATCAAAAGTACCACCACCTAAATCGAAGATCAAT 98719 Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 || || | ||| | | |||||||| ||||| || || ||||| || || ||||| Sbjct 98720 ACATTTCTCTCGCCAGTTCCTTTCTTATCAAGACCATAAGCAATAGCAGCTGCAGTTGGC 98779 Query 7634 TCATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTG 7692 || ||||| || | | ||| |||| |||||||| | | ||||| || || ||||| Sbjct 98780 TCGTTAATGATTCTCATTACA-TTCAAACCAGCAATTGCACCTGCATCCTTTGTTGCTTG 98838 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 ||||| || || || || || || || || || || || || | | | | || ||| Sbjct 98839 ACGTTGTGAGTCATTGAAATAAGCTGGAACAGTAACTACAGCATTCTTAATTTGGCGACC 98898 Query 7753 GAGATACGATTCCGCGATATCTTTCAT-TTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 | || | ||| | ||| || ||||| ||| |||| |||||| | ||||| ||||||| Sbjct 98899 CAAGTATGCTTCAGAGATTTCCTTCATCTTTTGTAA-AACCATAGCAGAAATTTCTTCAG 98957 Query 7812 CCGCAAACTGTTTCGTTTCACCGTTAA--AATCAACTTCAATCATGGGTTTATCCGCAGC 7869 | || | ||| ||||||| ||| | | || || || || |||||| | Sbjct 98958 CATGGAATTCCTTCTTTTCACC--TAAGTAGTTTACACTGATGATTGGCTTATCCTTTGG 99015 Query 7870 ACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAA 7929 ||| | || ||| | | ||| | ||||||| ||| || || || ||| Sbjct 99016 ACCTCTAACTACTTTAAATGGCCAGTGAGTCATATCACTTTGTACTGCCTGATCATCAAA 99075 Query 7930 CTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTG 7989 |||||| || |||||||| || ||||||||||||||||||| || || | || ||| Sbjct 99076 CTTTCTACCAATAAGACGTTTAGCATCAAAAACTGTGTTTTCTGGATTTCTAGCAACTTG 99135 Query 7990 GTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGG 8049 ||||| || || || || |||||||| || | |||| ||||| || || || ||||| Sbjct 99136 ATTCTTTGCTGCATCACCAATAAGACGCTC---AGTTTCAGTAAATGCTACATATGATGG 99192 Query 8050 GGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCC 8109 || || || || ||||| ||||| | || ||| ||||| |||||| ||| || || Sbjct 99193 TGTTGTACGGTTACCTTGATCGTTTGGAACAATATCTACAGTATCGTTTCTCCATACACC 99252 Query 8110 GACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGA 8152 || || || || || || |||||||||||||| || ||| || Sbjct 99253 AACACATGAGTATGTGGTACCTAAATCAATACCAATAGCTGGA 99295 >seq10 Length=1316356 Score = 219 bits (242), Expect = 5e-52 Identities = 1160/1827 (63%), Gaps = 53/1827 (3%) Strand=Plus/Minus Query 104368 TAATACATACCCGTTTTTAAACCAGTTTTCCACGCGTACATGTGCATAGACGAAAGTTTT 104427 ||||| || || ||||||| ||| ||||||| | || | |||||||| || | ||| Sbjct 447547 TAATAAATGCCTGTTTTTAGACCTTTTTTCCAACCATAAAAATGCATAGATGATAACTTT 447488 Query 104428 GAAATTGTTGGACTCTCGACGAATAAGTTCATACTTTGACTTTGGTCTATATACACACCT 104487 | || | | | | || | | ||||| | ||| ||| | ||| ||| Sbjct 447487 GCAAAGTTAGCATTTTCCATATGGATGTTCAAAGATTGCGATTGACAAACATATGGACCC 447428 Query 104488 CTATCCGCCGCCATATCGATGATTGTTTTTTGACTCATTTCCCATACGGTTTTATACAAT 104547 ||||| || |||||||| || | ||| ||||| | ||||||||||| || ||||| | Sbjct 447427 CTATCTGCAGCCATATCAATTACTGTCTTTTGCTTGATTTCCCATACAGTCTTATAAAGC 447368 Query 104548 TCCTTAAGATCATCGGGTATATCAATAATGTTTTGAACAGACCCATTTGCCTTCACCATA 104607 || | ||| || || || || || ||||||| | ||||| || | ||| Sbjct 447367 TCACGTATATCCTCCGGAATTGTAAGTATATTTTGAATACTGCCATTA---TTTGCAATA 447311 Query 104608 AGATCTTTCATTT-CCTTCGA--CCAGAGTCCACGTTCTTTCAAATCGTTTACTAAATGT 104664 | || | | | ||| | ||| | ||| | ||| ||||| |||| || || Sbjct 447310 ATATTCTGCTTAAGCCTATCATCCCATAACCCAAGCTCTAGTAAATCATTTAGCAAGTGC 447251 Query 104665 TTGTTTACGACGACAAATTCACCCGCGAGTGTTCGTCTCAAATAGATATTGGTCGTATAC 104724 ||||| || | || ||||| | ||| | | ||| || || | || | Sbjct 447250 GGATTTACTACAAAGAACTCACCAGATAGTACCCTACGATGATAAATGTTCGAGGTGAAT 447191 Query 104725 GGTTCGAAACACTCGTTGTTCCCTAAAATCTGGGATGTGGATGCGGTAGGCATAGGTG-- 104782 || || |||| ||| ||||| |||||||| || || |||||||| || ||||| || | Sbjct 447190 GGCTCAAAACTCTCATTGTTACCTAAAATTTGTGAAGTGGATGCTGTTGGCATTGGAGAT 447131 Query 104783 --CAAGA-AGAAG-ACTATT--CATAGTTCCTT-TCTTAACAAGTTTACGCATGGCATTC 104835 ||| | |||| || | | |||| || || || | |||| || | || | Sbjct 447130 ATCAATAGAGAATTACGAATACCATATTTGGAAATCCTATC---TTTAAGC---GAATCC 447077 Query 104836 CAATCGTATCGACCACTAAACTTTGG-GT--CTCGATCCCACATATCGAATTGAAGAATA 104892 ||||| | | ||| | | ||| || ||| |||||||||| ||||| | |||| Sbjct 447076 CAATCACAAAGTCCAG---AGTCTGGTGTAACTC---CCCACATATCAAATTGTAAAATA 447023 Query 104893 CCTTTACTAAACGGTGACCCCTTAAACGTTTCATAAGGACCGTACATTTCGGCAAGTTCA 104952 || ||||| || || || | | ||||| || ||||| || |||| ||||| ||| Sbjct 447022 CCCTTACTCGCAGGCGAACCGGAATATGTTTCGTATGGACCATATTTTTCTGCAAGCTCA 446963 Query 104953 CACGACGATTCGAGTGATGCGTGGTAGATAGTTTCGAATATATCAATGTTGAGTTTTCTC 105012 || | ||||| | ||| | |||||| ||| || || | | || | || | Sbjct 446962 CAGCTAGCATCGAGAGCTGCATAATAGATAACTTCAAAGATTTGTTTATTTAACTTCTTA 446903 Query 105013 GATTCTTCTGAACCGAATGTCATTCTTAACATGAT-AAACACGTCAGCGAGACCCTGAAC 105071 | | | || || || ||| ||| | | ||| || ||||| ||| ||||| || |||| Sbjct 446902 GCTCCCTCAGACTCGTATGGCATACGAAGCATCATGAAACA-GTCTGCGAGCCCTTGAAT 446844 Query 105072 ACCAATACCGATGGGTCTGTGACGCATATTTGAACGTTTCCCGTTTTCGGTTGGGTAAAA 105131 ||||| || | || | || | | ||| || ||| | | || | | || | Sbjct 446843 GCCAATCCCCAATGGACGATGTCTTAAATTCGAGTTTTTACATTCTT---TAAGAGAATA 446787 Query 105132 GTTTTTA---TCAATAACCTTGTTTAAGTTACGTGTAACCATTTTCGTAACACGATGTAA 105188 | | | ||||| | || || || || | |||| || |||||||| | ||| Sbjct 446786 ATATCCAACGTCAATCAATTTATTCAAATTCCTCGTAATCACCTTCGTAACTTCTTTTAA 446727 Query 105189 CTCTTCATGGTTAAACTCGTTCTTCTCGACATCAACGTATTTTGGTAACGCGATTGATGC 105248 || ||| | |||| || || | ||||||| | ||||| | | || || || Sbjct 446726 CTTATCAAAATCAAACGTCTTGTTATTTTTATCAACGAACTTTGGAAGGCCAATAGACGC 446667 Query 105249 GAGATTACATACGGCGGTTTCTTCCTTATCCGTAAACTCCAGAATTTCTGTACACAAATT 105308 |||||||| ||||| ||| ||||| || | || | |||||||| || || || Sbjct 446666 CAGATTACAAACGGCAACTTCGTCCTTGCTAGTGTATTCTATGATTTCTGTGCATAAGTT 446607 Query 105309 TGATGATTTAATCGTACCAACGTGTTTATGGTTCGACTTTTC--ATTACACGCGTCTTTG 105366 ||| ||| || || | | ||| ||||| |||||| ||| || ||||| Sbjct 446606 ACTTGAAACAATAGTTCCCAAATTTTTCTGGTT--ACTTTTGCTATTTGCAGCATCTTTA 446549 Query 105367 TAAAGCATATATGGGGTTCCCGTTTCACTTTGGGATTTAATAATTGCTTTCCAAATCTCC 105426 ||| ||| |||| || ||||| ||| |||| | | | ||| ||||| | | Sbjct 446548 TAACAAATAAATGGTGTCCCCGTCTCAATTTGAGCCTGTAAGATTAAGAACCAAAGTTTC 446489 Query 105427 GAAGCTGGTACAAC--TTTAGTTGCGATACCTTCAGATTCGTATTTCTCGTAAAGATCTT 105484 ||| | || | ||| || | |||| || || | || || || | | Sbjct 446488 TGCGCT--TTCATCGTTTTCCTTCCACGGCCTTGTTTCTCATACTCTTCATATAGCTTCT 446431 Query 105485 CAAACTCTTTACCGTACACGTCT-GAAAGACCCTTTGCCTG-ATCAGGACAAAACAATGA 105542 ||| || | || | || ||| | || |||| || | ||| || || | | | Sbjct 446430 TAAAATCATCGCCCCAAACATCTTGCAATCCCCT--GCATTCATCTGGGCACATTAGAGT 446373 Query 105543 CCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAA 105602 ||||| ||| ||||| | || |||||||| ||| |||| ||| | ||| | ||| Sbjct 446372 CCAATCTTGATCCTTCTCAACTCTTTCCATGAACAGATCAGGAACCCAAAGGGCAGGAAA 446313 Query 105603 GAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAG 105662 ||| || ||||| ||| |||||| | || |||||| | |||||| | ||| || | Sbjct 446312 GAGATCGCGACATCTCATCTCTTCCTTTCCATGATTCTTCCTAATTTCAATAAACTCTAC 446253 Query 105663 AATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCTTTACG---ACGCCCCGC 105719 || ||| ||||||||||||| ||||| | |||||| | |||||||| | || | Sbjct 446252 AACATCAACGTGCCATGGTTCCAAATAAATTGCAATGGCACCTTTACGCTTCCCTCCACC 446193 Query 105720 TTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGA 105779 ||||| | ||| || || || ||||| || || | ||| ||||| | |||| || Sbjct 446192 TTGATCAATATACCTAGCAGTGTCATTATAAACGCGCAGCATCGGAATTAATCCATTAGA 446133 Query 105780 TGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCC 105839 | | ||||||||||| ||||||| ||| | || | | | || || | ||| Sbjct 446132 TCTCCCATTTGTTCCTCGAATATATGAACCAGTTCCTCTAATATTACTTACTGCCACCCC 446073 Query 105840 AATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTC 105899 || || || || |||||| || || || | ||| ||| || | ||||||| Sbjct 446072 AAGGCCACCTGCAGTCTTACTAATGTTTGCGCATTTAGTTAGTGTGTCAAAGATACCGTT 446013 Query 105900 GATACTATCTTCCTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTGGGTGTACC 105959 || |||||| | || | | ||||| ||||||||||| |||| || || || Sbjct 446012 TATTGAATCTTCTGGAATCCTGAGTAAAAAACAAGATGACATTTGAGGTCGCGGCGTGCC 445953 Query 105960 AGCATTGAACAGAGTTGGTGTTGCATGAATGAACAAACCTTTCGATAACGCTTCGTATGT 106019 | ||| || || || |||||||||||| | || | || ||||||| || ||||| Sbjct 445952 TGAATTAAAGAGTGTGGGTGTTGCATGAGTAAAATATTTTTGCGATAACAACTCATATGT 445893 Query 106020 TTCCAGGACGTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCATATAGAGATA 106079 ||| || | |||||||| | |||||||||| || || ||||| |||| Sbjct 445892 TTCAAGTGCAGCTTCAATATCACCACAATGAATACCACAAGAAACCCGCATCAGAAGATG 445833 Query 106080 TTGGGGTGTTTCAATAATTTCACCGTCAATTTTCTGGAGATACCCTTTTTCAAGTGTTTT 106139 ||| ||| |||| | || || ||||||||| | ||||| | |||| || ||||| Sbjct 445832 TTGTGGTCTTTCCACAACTTTGTTGTCAATTTTAAGAAGATAGGATCTTTCTAGAGTTTT 445773 Query 106140 TAAACCAAAATACCCAAACTCAAAATC 106166 || ||||||| || | |||||||| Sbjct 445772 GAAGGCAAAATAATCATATTCAAAATC 445746 >seq11 Length=1268624 Score = 167 bits (184), Expect = 3e-36 Identities = 280/400 (70%), Gaps = 10/400 (3%) Strand=Plus/Minus Query 7450 TCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAA 7509 |||| ||||||||| ||||| ||||| || ||||| || || || ||| || || Sbjct 81627 TCTCTGATCGAAATCCTCACCTCCCAAATGGGTATCACCACTTGTAGCAACGACCTCGAA 81568 Query 7510 GATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAAT 7569 | || |||||| | || | ||||||||||| ||||||||||||| || | | Sbjct 81567 AACGCCGTTATCAATGGTCAAGAGAGAAACATCAAAAGTACCACCACCCAAATCGTATAC 81508 Query 7570 GAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGT 7629 | | | || | || | | ||||||| | ||| | || || || || || || Sbjct 81507 TAAAATGCTCTTCTCAGCTT------TCTTATCCAAACCAAAAGCAATTGCTGCTGCTGT 81454 Query 7630 TGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCG 7688 ||| |||||||||||||| | ||| |||| |||||||||| | ||||| || || | Sbjct 81453 TGGCTCATTAATAATACGGATTACA-TTCAAACCAGCAATAGCACCAGCATCCTTGGTAG 81395 Query 7689 CTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCT 7748 | || || || | ||| |||||||| || ||||| || | || || | | | |||| || Sbjct 81394 CCTGACGCTGAGCATCATTAAAGTAAGCTGGGACAGTAATTACTGCATGCTTTACTTCCT 81335 Query 7749 TACCGAGATACGATTCCGCGATATCTTTCATTTTG-GTAAGAACCATCGATGAAATCTCT 7807 |||||||||| | || || || |||||||| ||| | ||| ||||| | |||| |||| Sbjct 81334 TACCGAGATAAGCCTCAGCAATTTCTTTCATCTTGAGCAAG-ACCATAGCGGAAACCTCT 81276 Query 7808 TCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTT 7847 || | || || || ||| | ||||| |||| | ||||| Sbjct 81275 TCTGGGGCTAATTGCTTCTTCTCACCCTTAACAGAAACTT 81236 Score = 165 bits (182), Expect = 1e-35 Identities = 381/572 (67%), Gaps = 9/572 (2%) Strand=Plus/Minus Query 6611 TCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTA 6670 || |||||||| | || | ||| ||||||||||| || || |||||||| ||||||||| Sbjct 82457 TCTATGTCTTCCTGTGAGAGTCTACCCTTATCATTTGTGATAGTAATCTTCTCGGATTTA 82398 Query 6671 CCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTT 6730 || | ||||||| | ||||| || | |||||||||| | ||||| || || | Sbjct 82397 CCAGTACCCTTATCCTTTGCACTAACTTGTAAAATACCATCAGTATCAATTTCAAAAGTA 82338 Query 6731 ACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCA 6790 || | |||||| || ||| || || || | ||| || || | | || ||| | || Sbjct 82337 ACCTCAATTTGGGGAACACCTCTTGGAGCTGGTGGGATTCCAGAAAGCTCGAATTTTCCG 82278 Query 6791 AGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCA 6850 || | |||||||| | | | | ||| ||||| ||||| || | || || || Sbjct 82277 AGGAGGTTGTTATCCTTAGTCATTGGACGCTCACCCTCATAAACCTGGATAAGTACAGCT 82218 Query 6851 GGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTT 6910 || ||||||||||| || ||| | ||| ||||| | ||||| || ||| Sbjct 82217 GGCTGATTATCTTGGTAAGTACTGAAAACTTGGCTCTTCTTGGTTGGAACAACAGTGTTT 82158 Query 6911 CTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTC 6970 || ||| | | ||||||| ||||| | ||| || | || | || | ||| || Sbjct 82157 CTACCAATGAGCTTTGTCATAACTCCACCAACAGTCTCAATACCTAAAGTTAAAGGAGTA 82098 Query 6971 ACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCT 7030 || ||||| | ||| | || || | | | |||||||| | |||||| | ||| Sbjct 82097 ACATCCAATAATAATAAATC----AC---TACCT--CCTTCACCTGCTAAGATACCAGCT 82047 Query 7031 TGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTA 7090 || || | || || || ||||| || ||||| |||||||| | | || | || || Sbjct 82046 TGTACGGCAGCACCATAAGCGACGGCTTCATCTGGGTTAATTCCTCTGTTTGGCTCCTTT 81987 Query 7091 CCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACC 7150 || | ||| | ||| | || |||||| || ||||| || || || ||||| ||| Sbjct 81986 CCATCAAAGAACTCCTTGATCAAGGCTTGAATCTTAGGGATACGAGTAGAACCACCTACC 81927 Query 7151 AAAACGATTTCATTCACTTTCGATTTATCGAT 7182 |||||||| |||| |||| || || | ||| Sbjct 81926 AAAACGATCTCATCTACTTCAGACTTTTTGAT 81895 >seq4 Length=1103974 Score = 159 bits (176), Expect = 4e-34 Identities = 337/499 (68%), Gaps = 9/499 (2%) Strand=Plus/Minus Query 183161 CCGGTACCAATACCTTCAGTTCCATTTACCAAAACGGTCGGTAATATAGGAACATAATAG 183220 || |||||||| || ||||| ||||||||||||| | || | ||| ||||||||||| Sbjct 213955 CCTGTACCAATTCCATCAGTACCATTTACCAAAATCATTGGAATTATTGGAACATAATAT 213896 Query 183221 TCAGGTTCGATTTGTTTACCGTCGTCGTCGAGATAGTTTAATACTGGATCATC----TTT 183276 |||||| ||||||| || || || | | ||| |||||| |||||||| | | Sbjct 213895 AAAGGTTCAATTTGTTGTCCATCATCATATAAATAAGTTAATAAAGGATCATCAGCCTCT 213836 Query 183277 GGGATCAAAAAGTATTCTCGCGTTTTTAGTCAATTTTGTAAATATATACCTGGTTTGACT 183336 |||| ||| ||| || | ||||| | || ||||||||||| | | ||| Sbjct 213835 GGGA---AAATATAT-CTAGTCCATTTAGATAGCTTAGTAAATATATAACGAGCAGCACT 213780 Query 183337 CGCGTCTTTACCACCCATGAGACGTGTACCAAATTGACCACATGGTTCGAGTAAATTAAT 183396 || ||||| ||||| | |||||||||||||||||||||| | | ||| | Sbjct 213779 TGCATCTTTTCCACCTTCTTTTCTACTACCAAATTGACCACATGGTTCTAACAGATTTAG 213720 Query 183397 ATTATTCGACCCCGTAAAATTATGTGCTAATTTTACAATTGTATCTGCCAAAGAGACTTC 183456 |||||| || |||||| || || | || ||||| ||| | || || ||| Sbjct 213719 ATTATTACTTCCAACAAAATTTTGAGCCATATTAACAATAGTACTTTGTAATGATGATTC 213660 Query 183457 ACCGTGGTGATACGATGTTTTTTCCGAAACGTATGCGGCTAATTGCGCAACCTTCATTTC 183516 || || ||||| | | | ||| | ||| || | |||||||| ||||| || | ||| Sbjct 213659 TCCATGATGATAAGCACTATGTTCAGCAACATAACCAGCTAATTGTGCAACTTTAAGTTC 213600 Query 183517 AGATGTAAGATTCTTTGTGAAACACGCGTATAACACTTTTCGTTGGGATGGTTTTAAACC 183576 | |||| || ||| | || || | | ||||||| ||| ||||||||||| Sbjct 213599 ATTATTAAGCTTTTTTTTAAATGTTGCAAAAAGTACTTTTCTTTGTCCAGGTTTTAAACC 213540 Query 183577 ATCTGAAACGTGTGCAATCGACCTTTTCAAATCAGCAAGACTGAAATTTACAAGATCTTT 183636 |||| | | | || ||| || || | |||| ||| || |||||| ||||| Sbjct 213539 ATCTAATAAATTTGGAATAGATCTAGTAGTATCATATCTACTAAATAATACAAGTTCTTT 213480 Query 183637 ATGAATAAAATCAGAAATA 183655 ||||||||||||| ||||| Sbjct 213479 ATGAATAAAATCA-AAATA 213462 >seq3 Length=1102581 Score = 104 bits (114), Expect = 3e-17 Identities = 209/303 (69%), Gaps = 13/303 (4%) Strand=Plus/Plus Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 |||| ||||||| ||| ||||||||||||| ||| || | || | |||||| | | | Sbjct 860036 GCACCAACATTCATAATTCCATTTGCATCAATATCAAAGGTGACTTCAATTTGAG--GAA 860093 Query 6749 CCCCTC--GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCG 6806 |||||| ||||| | ||||| ||| | | |||||| ||||| || | ||||| | Sbjct 860094 CCCCTCTGGGTGCTGGAGGAATTCCCATCATTTCAAATTGTCCAAGCAACTTATTATCAG 860153 Query 6807 TCGC--CTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTG 6864 || |||| | ||| |||| | ||||||||| || || |||||| ||| Sbjct 860154 CAGCAAATTCT--CTTTCTCCTTGGAAAACTTTAATTCCAACTTGAGTTTGATTGTCTGC 860211 Query 6865 TGCCGTTGAGAAGA-TTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCG 6923 || || ||||| | || | ||||| |||| || || || |||||||| ||| | Sbjct 860212 AGCAGTGGAGAATACTTGGCTCTTT-TTAGTGGGTATTGTGGTATTTCTGTTAATTAATC 860270 Query 6924 GGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTA 6983 | || | || ||||||| |||||| | || | ||| | ||||| ||||| ||||| Sbjct 860271 GAGTAAAAACTCCACCCAAAGTTTCAATACCTAAAGATAAGGGTGTAACGTC---GAGTA 860327 Query 6984 ACA 6986 ||| Sbjct 860328 ACA 860330 Score = 86.0 bits (94), Expect = 8e-12 Identities = 197/291 (68%), Gaps = 8/291 (3%) Strand=Plus/Plus Query 7493 GTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCA 7552 || ||||| |||||||| | || || ||| | ||| | |||| ||| || ||||| Sbjct 860837 GTTGCTTTAACTTCAAACACTCCGCCAAGAATCTCTAAAATAGAAATATCGAAAGTACCT 860896 Query 7553 CCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTAC 7612 || |||| ||| ||| | || | || | | | ||| | | || || | ||||| Sbjct 860897 CCTCCCAAATCATAAAC---TGCGATTGTTTTGCCATCT--GCTTTT-TCCATTCCGTAT 860950 Query 7613 GCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGT 7671 || | ||| || || ||||| |||||||| || | ||| || || || || |||| Sbjct 860951 GCAAGAGCTGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAG-CCTGCTATAGA 861009 Query 7672 TGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGAC 7731 | ||||| || || ||||| || || ||||| |||||||| || || || || | || Sbjct 861010 GCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTAATAAC 861069 Query 7732 CGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTT 7782 || | | | || | |||| ||||| | ||| || | ||||||||||| Sbjct 861070 AGCATGCTTTACACTTCTACCAAGATAAGTTTCGGCAGTTTCTTTCATTTT 861120 >seq1 Length=874029 Score = 96.9 bits (106), Expect = 4e-15 Identities = 280/420 (67%), Gaps = 27/420 (6%) Strand=Plus/Plus Query 11280 ATCAAATCTACCGGGGCGTAATAACGCATCGTCGAGTATATCGATACGGTTTGTTGCACC 11339 ||||||||| || || ||| ||| ||| || | || ||| ||| |||||| | | Sbjct 744245 ATCAAATCTTCCTGGACGTGTTAATGCAGGATCTAATACATCAGAACGATTTGTTCCTGC 744304 Query 11340 TATAACAACAATTTCAGTTTCATTCTCGAAA-CCATCCATTTCTGTTAATAAT-TGGTTA 11397 || ||| | | | || | | ||| ||| |||||||||||| || ||| || ||| Sbjct 744305 TAAAACTATTACTCCATTATT-TTCAGTAAATCCATCCATTTCTAC-AAGAATCTGATTA 744362 Query 11398 ATTGTTTGTTCACGCTCATCGTTTG------CCGCAAACCCATTCATACTTCT------T 11445 | || ||| | |||||| || | | ||||| ||| | ||| | | Sbjct 744363 AGAGTGCTTTCTCTCTCATCATTAGATGAAGCAGCAAATCCACCCC--CTTTTGCACGCT 744420 Query 11446 TTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACG--GTTGATTTTCACGTG 11503 ||||| |||| |||||||||||||| ||||| | ||||| | | | ||||| | || Sbjct 744421 TTCTT-CCAACTGCATCAATTTCATCAATAAAAACAATACTTGGAGATAATTTT--CTTG 744477 Query 11504 CCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACG 11563 || | ||||| || | ||||| |||| || | || ||||| || |||| || Sbjct 744478 CCTGTGAAAATAATTCTCTTACTCTACTTGCACCCATTCCAACAAAAATCTCAATAAA-- 744535 Query 11564 ATGAC--CCCGAACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAA 11621 || || || || | || ||| || || || |||||| || | ||| |||||| Sbjct 744536 ATCACTTCCAGATATATAAAAAAATGGTACATTAGCTTCACCAGCAACAGCTTTTGCTAA 744595 Query 11622 AAGTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCACC 11681 | ||||||||| ||||||||| ||| ||||| ||||| |||||||||| ||||| Sbjct 744596 TAATGTTTTACCGGTACCTGGTGGTCCTACCAATAAAGCACCTTTTGGTATTTTTGCACC 744655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132704730080