Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F002223825.1_202015-12- 11] 12 sequences; 9,068,851 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq2 607 1e-168 seq11 365 6e-96 seq5 161 1e-34 seq10 129 8e-25 seq3 105 9e-18 >seq2 Length=988320 Score = 607 bits (672), Expect = 1e-168 Identities = 1113/1605 (69%), Gaps = 43/1605 (3%) Strand=Plus/Minus Query 195295 TCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGA 195354 || |||||||||||| |||||||| || || ||||||||||||||||||||| ||| || Sbjct 99295 TCCAGCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAACGA 99236 Query 195355 TCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTT 195414 | |||||| ||| | || || || ||||| ||||||||||| ||||| || || || || Sbjct 99235 TACTGTAGATATTGTTCCAAACGATCAAGGTAACCGTACAACACCATCATATGTAGCATT 99176 Query 195415 TACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTAT 195474 ||| || | ||| ||||| |||| ||||| ||||| ||||| |||| || || Sbjct 99175 TACTGAAACTGAGCGTCTTATTGGTGATGCAGCAAAGAATCAAGTTGCTAGAAATCCAGA 99116 Query 195475 CAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCA 195534 || || || ||||| || || |||||||||||| | |||||| ||| || ||| || Sbjct 99115 AAACACAGTTTTTGATGCTAAACGTCTTATTGGTAGAAAGTTTGATGATCAGGCAGTACA 99056 Query 195535 AGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGAT 195594 | ||||| | ||||| | | | |||| ||| ||| |||||||| || || Sbjct 99055 AAGTGATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGATAAGCCAATCAT 98996 Query 195595 TAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGT 195654 | ||| | | ||||| ||||| |||| | | ||||||||||| ||||||| Sbjct 98995 CAGTGTAAACTACTTAGGTGAAAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGT 98936 Query 195655 GTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGT---AAAACTGTGAAAGATGC 195711 || ||||||||||| | | ||| | | | ||||| ||| | || |||| Sbjct 98935 TTTACAAAAGATGAAGGAAATCTCTGAAGCATACTTGGGTCGCCAAA---TTAAGAATGC 98879 Query 195712 AGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGC 195771 || || ||||| || ||||| |||| ||| |||||||| || || |||||||| || | Sbjct 98878 TGTAGTTACTGTTCCAGCTTATTTCAATGACTCACAACGTCAAGCAACAAAGGATGCAGG 98819 Query 195772 TGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTG 195830 ||| ||||| ||| | || ||| | ||||| || || || ||||| || ||||| |||| Sbjct 98818 TGCAATTGCTGGTTTGAA-TGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTG 98760 Query 195831 CTTATGGTCTGGACAAGAACAAGGAC-GAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889 |||||||||| || ||||| | | || | || | ||||||||||||||| ||| | ||| Sbjct 98759 CTTATGGTCTTGATAAGAA-AGGAACTGGCGAGAGAAATGTATTGATCTTCGATTTAGGT 98701 Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949 |||||||| |||||||| ||| | | | |||||||| |||||| || ||||| || ||| Sbjct 98700 GGTGGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTTAAAGCT 98641 Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATT-T 196008 || |||||||||||||| | |||||||||||||| ||| | || | | ||| | Sbjct 98640 ACCGCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAACAGACTCGT--GGAATTCT 98583 Query 196009 GTCT-GATGAGTTCCGTCGAAAGAATA-AG--AAAGATATTTCTGGAAATCCTAGGGCTC 196064 || | | || ||| ||||||||| || | ||| | || |||| |||| ||| Sbjct 98582 GTGTACAAGATTTCAAGAGAAAGAATAGAGGTATGGATTTAACTTCAAATGCTAGAGCTT 98523 Query 196065 TTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAA 196124 | | | || || ||| |||||| ||||| || ||||| | || ||| | ||||| Sbjct 98522 TAAGAAGACTCAGAACTCAATGTGAGCGTGCAAAGAGAACTTTGTCATCTTCTACTCAAG 98463 Query 196125 CAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACA---ACTATTACCC 196181 | | ||||| | ||||| | | ||| || ||||| ||| || | || | Sbjct 98462 CTACAATTGAGTTAGATTCACTCTATGAGGGTATTGA---TTATTCAGTTGCCATCAGTA 98406 Query 196182 GTGCACGTTTTGAAGAGTTAAACTCTGATTTGTT--TAGGAAGTGTATGGAACCTGTTGA 196239 | || | || ||||| | | |||||| || | || | || | || ||||| Sbjct 98405 GAGCCAGATTCGAAGAACTCTGCGCTGATTACTTCCGTGCAACTTTA--GCTCCAGTTGA 98348 Query 196240 ACAAGTACTTCGTGACGCAAAGATGGATAAG---TCTAAGGTTGATGAAATTGTCCTTGT 196296 ||||||| || || ||||| ||| ||| || |||| |||| | || Sbjct 98347 GAAAGTACTCAAGGATGCTGGTATGGACAAGAGATCT---GTACATGATGTTGTATTGGT 98291 Query 196297 GGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAA 196356 || || || || |||||||| ||| |||| || || ||||| || ||| Sbjct 98290 TGGTGGTTCTACACGTATTCCAAAGGTTCAGGCCTTGATTCAGGAATTCTTTAACGGTAA 98231 Query 196357 AGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGC 196416 ||| | |||| | ||||| || |||||||| |||||||||||||| || || || || Sbjct 98230 AGAGCCATGCAAAGCAATCAATCCAGATGAAGCTGTTGCTTATGGTGCTGCTGTACAAGC 98171 Query 196417 TGCTATTCTCTCAGGTGTTGA-CAAT--AATAACGTCCAAGATCTTCTGCTACTTGATGT 196473 ||||| ||| | || ||| |||| | ||| || ||||| | || | ||||| Sbjct 98170 TGCTA---TCTTAAATGGTGAGCAATCCTCTGCCGTACAGGATCTCTTATTATTGGATGT 98114 Query 196474 TGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAG 196533 ||| || |||| || ||| | ||||| || |||||||||||||| || ||||||| | Sbjct 98113 TGCTCCATTATCACTCGGTTTAGAAACTGCTGGTGGTGTTATGACCAAGCTTATTGAACG 98054 Query 196534 GAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACC 196593 || |||||||| || | |||||| ||||||||| | || ||| | ||||| || Sbjct 98053 TAATACAACTATCCCAGCAAAGAAGACACAAGTCTTCACTACTTATGCTGATAACCAGAG 97994 Query 196594 AGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACT 196653 ||||| || ||||| ||||| || || | || | |||||||||||||| || Sbjct 97993 CGGTGTCTTGATCCAAGTTTATGAGGGTGAGAGAGCCATGACTAAGGATAACCATCTCCT 97934 Query 196654 TGGAACTTTCGAT-TTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATG 196712 ||||| ||| || |||| || |||||| | ||||| |||||||| ||||| ||| | | Sbjct 97933 TGGAAAGTTCCATCTTGA-TGGTATTCCACCAGCACCAAGAGGTGTACCACAAATTGAAG 97875 Query 196713 TTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTG 196772 | || ||||| || || ||||| || | || || | |||| || || ||| Sbjct 97874 TCACTTTTGATATTGATGCTAATGGTATCTTGAATGTATCTGCTGTTGATAAAAGCACTG 97815 Query 196773 GCAA-ATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATT 196831 | || | | | ||||| ||||| || || ||||| | | || ||||| || ||| Sbjct 97814 GTAAGAGCAG-CAAGATCACTATTACTAACGATAAGGGTAGATTATCAAAGGACGATATT 97756 Query 196832 GAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAG 196876 |||||||||||| | ||||| || || |||| || || || ||| Sbjct 97755 GAACGTATGGTTAATGATGCTGAGAAATACAAGGGTGAGGATGAG 97711 >seq11 Length=1268624 Score = 365 bits (404), Expect = 6e-96 Identities = 1049/1580 (66%), Gaps = 64/1580 (4%) Strand=Plus/Plus Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357 || |||||||||||||||||| |||||||| |||||||||||| | | | |||| | | Sbjct 80940 AGTTATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAG 80999 Query 195358 TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417 ||||||||||| || ||||| ||||| || |||| || ||||| || || | || || Sbjct 81000 AGTAGAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCAC 81059 Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAA 195477 ||| |||| | | |||| || | || || ||||| | |||| || || | | Sbjct 81060 TGATGATGAGAGATTGATTGGTGAATCAGCCAAGAATCAAGCTACTATCAATCCAGTTCA 81119 Query 195478 TACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGA 195537 ||| | || |||| ||| | ||||||||||| ||| |||| | |||||| | Sbjct 81120 GACTTTGTTCGACGTAAAGAGACTTATTGGTCGTCGTTTTAAGGATGATTCTGTCCAAAA 81179 Query 195538 CGATATAAAGGACTGGT---CTTATGAAGTTGTTCCCGGTG-TGGCTGATAAGCCTATGA 195593 |||| || | || | ||||| || || | | | || |||||| | Sbjct 81180 GGATA---AGACTTTGTTACCATATGAGATTATTAACAAAGATAGC----AAGCCTTACA 81232 Query 195594 TTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGG 195653 | | ||| || | ||||||||||| ||||| || || ||||| |||| |||||| Sbjct 81233 TACAAGTTTCTGTTAAGGGTGAGAAGAAGCAATTAGCCCCAGAAGAGGTTTCCGCTATGG 81292 Query 195654 TGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAG 195713 | ||| | |||||||| || | ||| || ||| | ||||| || || |||||| Sbjct 81293 TCTTGCTCAAGATGAAAGAAATTGCTGAGGCTTATCTCGGTAAGGAAGTAAAGCATGCAG 81352 Query 195714 TTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTG 195773 | | ||||| || |||||||| | |||| | || || ||||| || ||||| |||| || Sbjct 81353 TAATTACTGTCCCAGCTTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGTG 81412 Query 195774 CTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCT 195832 ||||||| ||| | || ||| | | ||||| ||||| |||||||| || ||||||||| Sbjct 81413 CTATTGCTGGTTTGAA-TGTAATCCGTATTATTAATGAGCCAACAGCAGCAGCAATTGCT 81471 Query 195833 TATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGT 195892 | |||| |||| ||||| || ||||| | | || | | ||| | |||||| Sbjct 81472 TTTGGTTTGGATAAGAAAGCTGA-GAAGAGCA-----TTTTAGTATACGATTTGGGTGGT 81525 Query 195893 GGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACT 195952 ||||| |||||||| || || | | ||||| || | ||||| || ||||| Sbjct 81526 GGTACTTTTGATGTTTCTCTCTTGACCATTGATAACGGCGTTTTCGAGGTCGTTGCTACA 81585 Query 195953 GCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGTC 196011 ||||||||| ||| | || ||||| ||||||||| | || | || ||| || Sbjct 81586 AGTGGTGATACCCATTTGGGAGGTGAGGATTTCGATCAGAGAGTTATGGACCACTTTATC 81645 Query 196012 -TGATGAGTTCCGTCGAAAGAATAAGAAA-GAT---ATTTCTGGAAATCCTAGGGCTCTT 196066 ||| | | ||| |||| | | |||| ||| | |||| || || || ||| Sbjct 81646 AAGATCA-TCAAGTC-AAAG-ACAGGAAAGGATGTAAAGTCTGACAA---GAGAGCCCTT 81699 Query 196067 CGTCGGCTTAGGACTGCATGT-GA-ACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAA 196124 | |||||| | | | || || | || | || || | || ||||| | | ||| Sbjct 81700 CAGAAGCTTAGAAGAG-AGGTCGAGAAGT-CGAAGAGAGCCCTTTCTTCAGCTCCACAAG 81757 Query 196125 CAATGGTTGAGATTGATTCGTTGTTTGACGGA--ATTGACTTCTATAC--AACTATTACC 196180 | ||| |||||||| |||||| ||| || | ||| | ||| | ||| Sbjct 81758 TTAAGGTCGAGATTGA----AGGTTTGATGGAGGATGTAGATCTGAGCGAAACCTTGACC 81813 Query 196181 CGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAA 196240 | || || || ||||| || |||| ||||| || ||| ||| || || ||| || Sbjct 81814 AGAGCTAAGTTCGACGAGTTGAATGCTGACTTGTTCAGAAAGACTATCGAGCCAGTT-AA 81872 Query 196241 CAAGTACTTCG-TGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGG 196299 ||| || | || || || | |||||| | || ||||| || || | || || Sbjct 81873 GAAGGTTTTGGAGGATGCTGGAATCAAAAAGTCTGAAGTAGATGAGATCGTTTTGGTAGG 81932 Query 196300 AGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAG--CTTCTTCAATAATAAA 196357 || || || ||||| || ||||||||| || || || ||||| || || Sbjct 81933 TGGTTCTACTCGTATCCCTAAGATTCAAGCCTTG--ATCAAGGAGTTCTTTGATGGAAAG 81990 Query 196358 GATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCT 196417 || ||||| | || ||||| |||||||| || ||||||||||| ||||| || ||| Sbjct 81991 GAGCCAAACAGAGGAATTAACCCAGATGAAGCCGTCGCTTATGGTGCTGCCGTACAAGCT 82050 Query 196418 GCTATTCTCTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCA 196477 | ||| | |||||| || | || ||| | | || | |||||| | Sbjct 82051 GGTATCTTAGCAGGTG--------AAGGAGGT-AGTGATTTATTATTATTGGATGTTACT 82101 Query 196478 CCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAAC 196537 || || | | ||| |||| || | ||||| |||||||| || | |||| ||| ||| Sbjct 82102 CCTTTAACTTTAGGTATTGAGACTGTTGGTGGAGTTATGACAAAGCTCATTGGTAGAAAC 82161 Query 196538 ACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCA--ACGTATTCCGATAATCAACCAG 196595 || | |||| || |||||| |||| |||||| || || |||||||| |||| Sbjct 82162 ACTGTTGTTCCAACCAAGAAGAGCCAAG--TTTTCAGTACTTACCAAGATAATCAGCCAG 82219 Query 196596 GTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTT 196654 ||| | ||| || || ||||| || || || ||| || | ||||||||| | || || Sbjct 82220 CTGTACTTATCCAGGTTTATGAGGGTGAGCG-TCCAATGACTAAGGATAACAACCTCCTC 82278 Query 196655 GGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTT 196714 |||| ||||| | | || || ||| | || || ||||||||||| || ||| | ||| Sbjct 82279 GGAAAATTCGAGCTTTCTGGAATCCCACCAGCTCCAAGAGGTGTTCCCCAAATTGAGGTT 82338 Query 196715 TGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGC 196774 || || || || | |||| ||| || | || | || |||| |||| | |||| Sbjct 82339 ACTTTTGAAATTGATACTGATGGTATTTTACAAGTTAGTGCAAAGGATAAGGGTACTGGT 82398 Query 196775 AAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAA 196834 ||||| || |||||| || || ||||| ||||| | || || |||| || || || Sbjct 82399 AAATCCGAGAAGATTACTATCACAAATGATAAGGGTAGACTCTCACAGGAAGACATAGAG 82458 Query 196835 CGTATGGTTCAAGATGCGGA 196854 |||||| || | || || || Sbjct 82459 CGTATGATTAAGGAGGCTGA 82478 >seq5 Length=1067107 Score = 161 bits (178), Expect = 1e-34 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 171861 TATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920 |||||| || ||||| || || | || ||||| |||||||| | || ||||| | || Sbjct 562153 TATGCAGATTTTTGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTC 562212 Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980 ||| ||||| || || | || || |||||||| ||||||||||| || ||||| ||||| Sbjct 562213 AGATACAATTGAGAATGTTAAGGCAAAGATTCAGGATAAGGAAGGAATCCCACCTGATCA 562272 Query 171981 GCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAA 172040 ||||| | || ||||| || ||||| | || ||||| | || ||| |||||||||| Sbjct 562273 ACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAA 562332 Query 172041 CGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | ||||||| ||||| ||| ||||| | || | || ||| | |||||| Sbjct 562333 CATTCAAAAAGAGTCCACTTTACACTTAGTCTTGAGACTTAGAGGTGGT 562381 Score = 159 bits (176), Expect = 5e-34 Identities = 175/233 (75%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| || ||||| || || | || ||||| |||||||| | || ||||| Sbjct 562377 GTGGTATGCAGATTTTTGTCAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAAC 562436 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| ||||| || || | || || ||||||||||||||||| || || ||||| | Sbjct 562437 CTTCAGATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAGGGAATCCCACCTG 562496 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 |||| ||||| | || ||||| || ||||| | || ||||| | || ||| |||| | Sbjct 562497 ATCAACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGACT 562556 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| ||||||| ||||||||| |||| | || | ||||| | |||||| Sbjct 562557 ACAACATTCAAAAAGAGTCTACTTTACATTTAGTATTGAGGCTCAGAGGTGGT 562609 Score = 152 bits (168), Expect = 7e-32 Identities = 173/232 (75%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| || || || || || | || ||||| |||||||| | || ||||| Sbjct 562605 GTGGTATGCAGATTTTCGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAAC 562664 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| ||||| || || | || || |||||||| ||||||||||| || ||||| | Sbjct 562665 CTTCAGATACAATTGAGAATGTTAAGGCAAAGATTCAGGATAAGGAAGGAATCCCACCTG 562724 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 |||| ||||| | || ||||| || ||||| | || ||||| | || ||| |||||| Sbjct 562725 ATCAACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATT 562784 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| ||||||| ||||| ||| ||||| | || | || ||| | || || Sbjct 562785 ACAACATTCAAAAAGAGTCCACTTTACACTTAGTCTTGAGACTTAGAGGCGG 562836 >seq10 Length=1316356 Score = 129 bits (142), Expect = 8e-25 Identities = 1153/1831 (63%), Gaps = 50/1831 (3%) Strand=Plus/Plus Query 77870 GACTTTGAATTTGGGTATTTTGGATTGAAGACTCTCGAAAAAAGTTACCTGCAGTACATG 77929 || ||||||| || ||||||| || || ||||| |||| | || || | | || Sbjct 445746 GATTTTGAATATGATTATTTTGCCTTCAAAACTCTAGAAAGATCCTATCTTCTTAAAATT 445805 Query 77930 GATGGAAAGCTCATGGAGACACCTCAATACTTATTCATGCGTGTTTCTATTGGTATTCAT 77989 || || | |||| | ||| ||| | | | ||||| |||||| |||||||||| Sbjct 445806 GACAACAAAGTTGTGGAAAGACCACAACATCTTCTGATGCGGGTTTCTTGTGGTATTCAT 445865 Query 77990 GGAAATGATATTCCAGCGGTACTTGAAACGTATGATAAAATGTC-CAATGGTATGTTTAT 78048 | ||||||| ||| | ||||||||| ||||| | || ||| ||| |||| Sbjct 445866 TGTGGTGATATTGAAGCTGCACTTGAAACATATGAGTTGTTATCGCAAAAATAT-TTTAC 445924 Query 78049 TCACGCAACACCTACTTTGTTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTT 78108 ||| |||||||| || | |||||| |||| || || || || || |||||||||||||| Sbjct 445925 TCATGCAACACCCACACTCTTTAATTCAGGCACGCCGCGACCTCAAATGTCATCTTGTTT 445984 Query 78109 CCTACTTGCAAATAAGGAGGACTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGC 78168 |||| | | || || || || || ||||| | | || || || | || || Sbjct 445985 TTTACTCAGGATTCCAGAAGATTCAATAAACGGTATCTTTGACACACTAACTAAATGCGC 446044 Query 78169 TCAGATTTCTAAGTGGGCTGGTGGTATAGGTCT-TCA-TATTCACGATGTTCGTGCAAAC 78226 | ||| |||| || ||||| | || | || || | || || | | ||| Sbjct 446045 AAACATTAGTAAGACTGCAGGTGGCCTTGGGGTGGCAGTAAGTA--ATATTAGAG-GAAC 446101 Query 78227 AAGTCCA-GGATTAGAGGAACTAATGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGT 78285 || || ||| ||||||| ||||| ||| ||||| | ||||| ||||| | || Sbjct 446102 TGGTTCATATATTCGAGGAACAAATGGGAGATCTAATGGATTAATTCCGATGCTGCGCGT 446161 Query 78286 ATTCAATGCTACAGCACGCTATGTCAACCAAGCGGGTCGTAGG----AAGGGGTCATTCG 78341 | |||| || || | ||| | | |||| || | | | |||| | |||| | Sbjct 446162 TTATAATGACACTGCTAGGTATATTGATCAAGGTGGAGGGAAGCGTAAAGGTGCCATT-G 446220 Query 78342 CTATGTACCTTGAACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACC 78401 | || || | ||||| ||||||| ||||| | || ||| | ||| || | || | Sbjct 446221 CAATTTATTTGGAACCATGGCACGTTGATGTTGTAGAGTTTATTGAAATTAGGAAGAATC 446280 Query 78402 AGGGTGACGAGGAAGCTCGATGCAGGGATTTATTCACTGCTATGTGGATTCCGGATCTTT 78461 | || | || || |||| | ||| | || |||| | ||| |||| ||||| | Sbjct 446281 ATGGAAAGGAAGAGATGAGATGTCGCGATCTCTTTCCTGCCCTTTGGGTTCCTGATCTGT 446340 Query 78462 TTATGAAGAGAGTTGAGGAAGGAGGTA-AATGGTCTCTTTTCTGTCCAGATAAGACTAAG 78520 | ||| | |||||||| |||||| | | ||| |||| | || |||||| | | || Sbjct 446341 TCATGGAAAGAGTTGA-GAAGGATCAAGATTGGACTCTAATGTGCCCAGATGA-ATGCAG 446398 Query 78521 GGTCTTTC-AGATGTATACGGGGAAGAATTCGAAAAATTGTACACTAAATACGAAGAGGA 78579 || || | |||||| | || || || || | || | || | || || | | Sbjct 446399 GGGATTGCAAGATGTTTGGGGCGATGATTTTAAGAAGCTATATGAAGAGTATGAGAAACA 446458 Query 78580 AGGTCTCGCTATTAAGACAATTGATGCATCTGAACTATGGAAAGCTATTATCAAAAG-TC 78638 ||| | | | || || || | || |||| ||| || | | | | | || Sbjct 446459 AGGCCGTGGAAGGAAAACGATGAAAGCGCAGAAACTTTGG-TTCTTAATCTTACAGGCTC 446517 Query 78639 AAACAGAGACCGGCACCCCGTATATGCTATACAAAGACAGCTG-TAACAGAAAGTCTAAC 78697 ||| ||||| || || || | ||| || ||||| |||| || || || |||| Sbjct 446518 AAATTGAGACGGGGACACCATTTATTTGTTATAAAGA-TGCTGCAAATAGCAAAAGTAAC 446576 Query 78698 CAAAAGAACCTAGG---TGTCATCAAAAGCTCTAACCTTTGCACAGAAATTCTGGAATAC 78754 || || || | || | | | ||| |||| | ||||||||||| | |||||| Sbjct 446577 CAGAAAAATTTGGGAACTATTGTTTCAAG---TAACTTATGCACAGAAATCATAGAATAC 446633 Query 78755 ACGGATAAGAATGAAACAGCTGTATGTAATCTAGGGTCTATCGCTCTACCAAAGTTTGTT 78814 || ||| | ||| || || |||||||| | |||||| | || |||||||| ||| Sbjct 446634 ACTAGCAAGGACGAAGTTGCCGTTTGTAATCTGGCGTCTATTGGCCTTCCAAAGTTCGTT 446693 Query 78815 GATCGAGAATTA-AAGACATTTGATTATTCAAAGCTCCACGAAATTACAAAAATCGTAAC 78873 ||| | ||| | ||||| ||||||| | ||| | | ||| |||| || | | || Sbjct 446694 GAT-AAAAATAACAAGACGTTTGATTTTGATAAGTTAAAAGAAGTTACGAAGGTGATTAC 446752 Query 78874 TAAAAATTTAAATCGTGTAATTGACCGTAACTACTA-CCCAGTCGAGACTGCTAAATATT 78932 | ||||| ||| | |||||| | || || | | ||| || |||| | | Sbjct 446753 GAGGAATTTGAATAAATTGATTGACGTTGGATATTATTCTCTTAAAGAATG-TAAAAACT 446811 Query 78933 CTAATATGAAACATAGACCAATTGGTCTAGGTGTTCAAGGATTGGCAGA-TGTATTCAAC 78991 | ||| | | |||| | ||| | || | || ||||||| | ||||| ||| |||| Sbjct 446812 CGAATTTAAGACATCGTCCATTGGGGATTGGCATTCAAGGGCTCGCAGACTGT-TTCATG 446870 Query 78992 TTGTGTGGTCTTCCCTTCGATTGCGAAGATTCAAGGACTATGAATGCTCATATTTTCGAG 79051 || | || | || | ||| | || | | | || | ||| || || || || Sbjct 446871 ATGCTTCGTATGCCATACGAGTCTGAGGGAGCTAAGAAGTTAAATAAACAAATCTTTGAA 446930 Query 79052 ACTATTTATCATGCAGCTTTAGAAGCAAGTTCAGAACTTGCTGAAATTAATGGGCCTTAT 79111 ||| ||| |||||||| | || || || | || ||||| |||| |||| || || Sbjct 446931 GTTATCTATTATGCAGCTCTCGATGCTAGCTGTGAGCTTGCAGAAAAATATGGTCCATAC 446990 Query 79112 GAGAGTTTCGAGGGTTCACCCGCTTCACAAGGTCTTCTTCAACCAGATCTATGGGAAGGT 79171 || | | ||||| || || | ||| || | ||| ||| | |||| || | Sbjct 446991 GAAACATATTCCGGTTCGCCTGCGAGTAAGGGTATTTTACAATTTGATATGTGGGGAGTT 447050 Query 79172 GAAGCTAAATACAGTGGTCGTTACGATTGGGATGCAATGAGAAAGCGTGTAATGACGA-- 79229 | | | || ||| | || ||||||||| | | |||| | | | | | Sbjct 447051 ACACC---AGACTCTGGACTTTGTGATTGGGATTCGCT--TAAAGATAGGATTTCCAAAT 447105 Query 79230 AGGGTCTGAGAAACAGTCTTCTCGTAGCACCAATGCCCACTGCTTCGACGGCTCAGATCC 79289 | ||| | | || ||| | || | |||||||| || || || || | || || Sbjct 447106 ATGGTATTCGTAATTCTCTATTGATATCTCCAATGCCAACAGCATCCACTTCACAAATTT 447165 Query 79290 TCGGTAATAATGAGTGTTTTGAACCATACACTACAAACATATATCTTCGTCGCACATTAG 79349 | ||||| |||||| ||||||| |||| ||| | ||||| |||| |||| | | || Sbjct 447166 TAGGTAACAATGAGAGTTTTGAGCCATTCACCTCGAACATTTATCATCGTAGGGTACTAT 447225 Query 79350 CTGGTGAATTTGTTGTGGTTAACAAACATCTTGTTGAA-GATTT-GAAGAAGTTAGGTCT 79407 ||||||| || |||| || || || |||| | || ||||| ||| || ||| Sbjct 447226 CTGGTGAGTTCTTTGTAGTAAATCCGCA-CTTGCTAAATGATTTACTAGAGCTTGGGTTA 447284 Query 79408 TTGGTCAAAAGAGATGAA--AGACT-TAATGGTCAAAGCCGGAGGGAGTGTGCAAAACAT 79464 | || | || | | || ||| | | || | |||| || ||| | ||||| || Sbjct 447285 TGGGATGATAG-GCTTAAGCAGAATATTATTG-CAAA--TAATGGCAGTATTCAAAATAT 447340 Query 79465 AGTAGAGATACCAGATAATATTAAAAATCTTTATAAGACTGTTTGGGAAATTAGCCAAAA 79524 | | || || || |||| | |||||||||||||| |||||||| | ||||| Sbjct 447341 ACTTACAATTCCGGAGGATATACGTGAGCTTTATAAGACTGTATGGGAAATCAAGCAAAA 447400 Query 79525 ATGTATTATCGACATGGCAGCGGACAGGGGTCGTTTTATCTGTCAATCACAATCTATGAA 79584 | || || ||||| || || ||||||| | | | |||||||| |||||| |||| Sbjct 447401 GACAGTAATTGATATGGCTGCAGATAGGGGTCCATATGTTTGTCAATCGCAATCTTTGAA 447460 Query 79585 TTTGTTTTTAGAGTCACCTACAATTGGAAAAATATCCTCTATGCACATGTATGCGTGGAA 79644 | | | || ||| ||| ||| |||| |||||||| | |||| ||||| Sbjct 447461 CATCCATATGGAAAATGCTAACTTTGCAAAGTTATCATCTATGCATTTTTATGGTTGGAA 447520 Query 79645 GTCTGGACTCAAGACAGGTATGTACTACTTG 79675 || || || ||||| || || || ||| Sbjct 447521 AAAAGGTCTAAAAACAGGCATTTATTATTTG 447551 >seq3 Length=1102581 Score = 105 bits (116), Expect = 9e-18 Identities = 201/296 (68%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 196454 GATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTT 196513 |||||| || |||| || ||| ||||| |||| | ||| ||||||| |||||| ||| Sbjct 860337 GATCTTTTGTTACTCGACGTTACACCCTTATCTTTAGGTATTGAAACTTTGGGTGGAGTT 860278 Query 196514 ATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCA 196573 | ||| | | ||| | || || || || || || ||||| ||| ||||| || || Sbjct 860277 TTTACTCGATTAATTAACAGAAATACCACAATACCCACTAAAAAGAGCCAAGTATTCTCC 860218 Query 196574 ACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGT 196633 || | | || |||||| | ||| ||| |||| | |||||||| | | Sbjct 860217 ACTGCTGCAGACAATCAAACTCAAGTTGGAATTAAAGTTTTCCAAGGAGAAAGAGAATTT 860158 Query 196634 GCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGA 196693 || ||||| | | |||||| || || ||| ||| ||||| | ||||||||| Sbjct 860157 GCTGCTGATAATAAGTTGCTTGGACAATTTGAAATGATGGGAATTCCTCCAGCACCCAGA 860098 Query 196694 GGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGT 196749 || ||||| || ||| | || ||| ||||| || |||||||||||| | || || Sbjct 860097 GGGGTTCCTCAAATTGAAGTCACCTTTGATATTGATGCAAATGGAATTATGAATGT 860042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862301320640