Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F002223825.1_202015-12- 11] 12 sequences; 9,068,851 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq2 554 3e-152 seq11 253 2e-61 seq3 147 2e-29 seq4 118 8e-21 >seq2 Length=988320 Score = 554 bits (614), Expect = 3e-152 Identities = 1078/1572 (69%), Gaps = 36/1572 (2%) Strand=Plus/Plus Query 281329 AGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAAT 281388 ||| || ||| ||| | ||||| | || | || ||||| || || |||||||| Sbjct 97735 AGCATCATTAACCATACGTTCAATATCGTCCTTTGATAATCTACCCTTATCGTTAGTAAT 97794 Query 281389 AGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATT 281448 ||| || || || || || ||||||| | |||| ||||| | |||||||| Sbjct 97795 AGTGATCTTGCTGCTCTTACCAGTGCTTTTATCAACAGCAGATACATTCAAGATACCATT 97854 Query 281449 GGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCC 281508 ||||| | |||||| |||||||||||||| || || ||||| | || ||||| || || Sbjct 97855 AGCATCAATATCAAAAGTGACTTCAATTTGTGGTACACCTCTTGGTGCTGGTGGAATACC 97914 Query 281509 TTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAA 281568 || | || || |||| || || ||||| ||||| | || |||||||| | Sbjct 97915 ATCAAGATGGAACTTTCCAAGGAGATGGTTATCCTTAGTCATGGCTCTCTCACCCTCATA 97974 Query 281569 AATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTC-TGGATTTTT 281627 || |||||| || | | || ||||| | |||||| || || ||| || || || Sbjct 97975 AACTTGGATCAAGACACCGCTCTGGTTATCAGCATAAGTAGTGAAGACTTGTGTCTTCTT 98034 Query 281628 TACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTA 281687 | | ||| | ||||| || | ||||||| |||||||||| ||||||||| ||||||| Sbjct 98035 TGCTGGGA-TAGTTGTATTACGTTCAATAAGCTTGGTCATAACACCACCAGCAGTTTCTA 98093 Query 281688 AACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTT 281747 |||| || || | |||| ||||| | || | | || || | || | || Sbjct 98094 AACCGAGTGATAATGGAGCAACATCCAATAATAAGAGATCCTGTACGG---CAGAGGATT 98150 Query 281748 GACCAACA---AGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGAT 281804 | || || | ||||| ||||| | |||||||||||| |||||||||||||| |||| Sbjct 98151 GCTCACCATTTAAGATAGCAGCTTGTACAGCAGCACCATAAGCAACAGCTTCATCTGGAT 98210 Query 281805 TAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT--TGAAAGAAGTTGTCTTA-CCT 281861 | | | || | | | |||||| || ||| |||| |||| ||| | || | ||| Sbjct 98211 TGATTGCTTTGCATGGCTCTTTACCGTT-AAAGAATTCCTGAATCAAG--GCCTGAACCT 98267 Query 281862 TAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTT 281921 | |||||||| | || || ||||| ||||||| ||||| || | || |||| Sbjct 98268 TTGGAATACGTGTAGAACCACCAACCAATACAACATCATGTACAGATCTCTTGTCCATAC 98327 Query 281922 TTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAA 281981 | |||| | ||||| ||||| || | | | || | || | || | || | Sbjct 98328 CAGCATCCTTGAGTACTTTCTCAACTGGAGCTAAAGTTGCACGGAAGTAATCAGCGCAGA 98387 Query 281982 GTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAAT 282041 ||||||||||| | |||||| | | | || ||||||||| || || | | |||| Sbjct 98388 GTTCTTCGAATCTGGCTCTACTGATGGCAACTGAATAATCAATACCCTCATAGAGTGAAT 98447 Query 282042 CAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTG 282101 | | ||||| |||| |||||| ||||| || | | | || ||||| |||||| | Sbjct 98448 CTAACTCAATTGTAGCTTGAGTAGAAGATGACAAAGTTCTCTTTGCACGCTCACATTGAG 98507 Query 282102 TCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGT---TTTATATTTTCTCT 282158 | || ||||||| ||| ||| | || | | | ||||| | | ||| ||||||| Sbjct 98508 TTCTGAGTCTTCTTAAAGCTCTAGCATTTGAAGTTAAATCCATACCTCTATTCTTTCTCT 98567 Query 282159 TGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAG 282218 ||||||||| ||||| || || || | ||||||||||||||||| ||||| | || Sbjct 98568 TGAAATCTTGTACACAGAATTCCACGAGTCTGTTATCAAAATCTTCACCACCCAAGTGAG 98627 Query 282219 TATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACAT 282278 ||| || | |||||| | |||| |||| |||||||||| || || | | |||| Sbjct 98628 TATCACCAGCGGTAGCTTTAACTTCAAAAATACCATCTTCAATAGTTAATAATGATACAT 98687 Query 282279 CATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTC--TTGGTTT-T 282335 || || |||||||| | ||| || || | |||||| | || | | || ||| | Sbjct 98688 CAAAAGTACCACCACCTAAATCGAAGATCAATACATTTCTCTC---GCCAGTTCCTTTCT 98744 Query 282336 TATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAA 282395 ||||||||||||| |||| |||||| |||||||| || ||||| ||||||| ||||| | Sbjct 98745 TATCAAGACCATAAGCAATAGCAGCTGCAGTTGGCTCGTTAATGATTCTCATTACATTCA 98804 Query 282396 GACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAG 282455 |||||||||| |||||||| || || ||||| | |||||| || || ||||| || | Sbjct 98805 AACCAGCAATTGCACCTGCATCCTTTGTTGCTTGACGTTGTGAGTCATTGAAATAAGCTG 98864 Query 282456 GAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAG--CGCTT--GCTGTTTGT 282511 ||||||||| || |||| | ||| ||| | | ||| |||| | ||| Sbjct 98865 GAACAGTAACTACAGCAT-TCTTA---ATTTGGCGACCCAAGTATGCTTCAGAGATTTCC 98920 Query 282512 TTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCATTT 282571 ||||| || ||||| ||| | ||||||| ||| | | ||| ||| |||| | Sbjct 98921 TTCATCTTTTGTAAAACCATAGCAGAAATTTCTTCAGCATGGAATTCCTTCTTTTCACCT 98980 Query 282572 TGATATGATAC-TTCAAAATATGGTTTA---TTACCAACATTAATAACTTTAAATGGCCA 282627 || ||| | | || ||| ||| || | | ||| |||||||||||||| Sbjct 98981 AAGTAGTTTACACTGATGAT-TGGCTTATCCTTTGGACCTCTAACTACTTTAAATGGCCA 99039 Query 282628 ATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGC 282687 | ||||||| ||| || || |||| ||| | ||||||||| | ||||| || Sbjct 99040 GTGAGTCATATCACTTTGTACTGCCTGATCATCAAACTTTCTACCAATAAGACGTTTAGC 99099 Query 282688 ATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAG 282747 |||||||| || || |||||| ||| |||||| || |||||||| ||||| || Sbjct 99100 ATCAAAAACTGTGTTTTCTGGATTTCTAGCAACTTGATTCTTTGCTGCATCACCAATAAG 99159 Query 282748 ATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGC 282807 | | || || || ||||||| ||||||||||| ||||| || ||||||||||| || | Sbjct 99160 ACGCTCAGTTTCAGTAAATGCTACATATGATGGTGTTGTACGGTTACCTTGATCGTTTGG 99219 Query 282808 AATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATC 282867 || ||| || || || | ||| ||||||||| ||||| | || || |||||||| Sbjct 99220 AACAATATCTACAGTATCGTTTCTCCATACACCAACACATGAGTATGTGGTACCTAAATC 99279 Query 282868 AATACCAATAGC 282879 |||||||||||| Sbjct 99280 AATACCAATAGC 99291 Score = 93.3 bits (102), Expect = 3e-13 Identities = 202/300 (67%), Gaps = 17/300 (6%) Strand=Plus/Plus Query 85960 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCCA-ATGTTCTAAATACTCC 86018 ||||||||||| || ||||| || |||| |||| | || | ||| ||| | || Sbjct 98603 TCAAAATCTTCACCACCCAAGTGAGTATCACCAGCGGTAGCTTTAACTTCAAAA-ATACC 98661 Query 86019 ATTTGAGATATTCATTAACGAAACATCTAATGTCCCAGCTCCTAAGTCATAAACAATTAC 86078 || | ||| | | ||| || ||||| || || ||| | ||||| || | | | ||| Sbjct 98662 ATCTTCAATAGTTAATAATGATACATCAAAAGTACCACCACCTAAATCGAAGATCAATAC 98721 Query 86079 GTTAC---CACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGC 86135 || | | |||||| ||| || ||| | ||| || |||| ||| || Sbjct 98722 ATTTCTCTCGCCAGTTCCTTTCTTA------TCA------AGACCATAAGCAATAGCAGC 98769 Query 86136 TGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAG 86195 ||||||||| || ||||| ||| | | |||| ||||| |||||| | | | ||| Sbjct 98770 TGCAGTTGGCTCGTTAATGATTCTCATTACATTCAAACCAGCAATTGCACCTGCATCCTT 98829 Query 86196 AGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTATTAAT 86255 |||||||| | |||| |||||| ||||| ||||| ||||||| || || || ||||| Sbjct 98830 TGTTGCTTGACGTTGTGAGTCATTGAAATAAGCTGGAACAGTAACTACAGCATTCTTAAT 98889 >seq11 Length=1268624 Score = 253 bits (280), Expect = 2e-61 Identities = 1023/1586 (65%), Gaps = 43/1586 (3%) Strand=Plus/Minus Query 281306 TTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAG 281365 || ||| |||| |||||| | ||| || ||||||| | ||| || | || | ||| Sbjct 82499 TTGTCTTCTTCGGCAAATTGCTCAGCCTCCTTAATCATACGCTCTATGTCTTCCTGTGAG 82440 Query 281366 AATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCG 281425 | ||| || || ||| || |||||||| |||| |||||| || ||||| Sbjct 82439 AGTCTACCCTTATCATTTGTGATAGTAATCTTCTCGGATTTACCAGTACCCTTATCCTTT 82380 Query 281426 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 281485 ||| | || | | |||||||| | ||| | ||||| || || |||||||| || || Sbjct 82379 GCACTAACTTGTAAAATACCATCAGTATCAATTTCAAAAGTAACCTCAATTTGGGGAACA 82320 Query 281486 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 281545 ||||| |||| |||||||| || | | ||| |||| || || ||||| ||| Sbjct 82319 CCTCTTGGAGCTGGTGGGATTCCAGAAAGCTCGAATTTTCCGAGGAGGTTGTTATCCTTA 82260 Query 281546 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT---TGATTATCTGAA 281602 || | | || |||||||| ||| |||||| | ||||| | ||||||||| Sbjct 82259 GTCATTGGACGCTCACCCTCATAAACCTGGATA---AGTACAGCTGGCTGATTATCTTGG 82203 Query 281603 TAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATT 281661 ||||| | || ||| ||| | || || |||| ||||||||| |||| | || Sbjct 82202 TAAGTACTGAAAACT-TGGCTCTTCTTGGTTGGAACAACAGTGTTTCTACCAATGAGCTT 82144 Query 281662 GGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGAC 281721 ||||||| |||||| | || || | ||| | || | |||||| ||||| | || | Sbjct 82143 TGTCATAACTCCACCAACAGTCTCAATACCTAAAGTTAAAGGAGTAACATCCAATA--AT 82086 Query 281722 AATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACC 281781 |||| || | | || || ||| | | ||| | ||||| | |||||||| Sbjct 82085 AATA-----AATCACTACCTCC--TTCACCTGCTAAGATACCAGCTTGTACGGCAGCACC 82033 Query 281782 ATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT- 281840 ||| || || |||||||| || |||| | ||| | | || |||| || || | Sbjct 82032 ATAAGCGACGGCTTCATCTGGGTTAATTCCTCTGTTTGGCTCCTTTCCATCAAAGAACTC 81973 Query 281841 -TTGAAAGAAG-TTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTC 281898 |||| | | ||| | |||||| ||||||| || || || || || || || || Sbjct 81972 CTTGATCAAGGCTTGAAT---CTTAGGGATACGAGTAGAACCACCTACCAAAACGATCTC 81916 Query 281899 ATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACC 281958 || || | || || | | | | |||| ||||| || | ||| || || | | Sbjct 81915 ATCTACTTCAGACTTTTTGATTCCAGCATCCTCCAAAACCTTCTTAACTGGCTCGATAGT 81856 Query 281959 AGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATA 282018 ||| |||||||| | | | || ||||| |||||||| || | || | | Sbjct 81855 CTTTCTGAACAAGTCAGCATTCAACTCGTCGAACTTAGCTCTGGTCAAGGTTTCGCTCAG 81796 Query 282019 ATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGC 282078 ||| | | || | |||| |||| || | | || ||| | | ||||| || || Sbjct 81795 ATCTACATCCTCCATCAAACCTTCAATCTCGACCTTAACTTGTGGAGCTGAAGAAAGGGC 81736 Query 282079 ACGTTTAGCACGTTCACATGCTGTCCT-TAGTCTTCGTAAGGCTTTTGCTGATTGA-TTC 282136 | || | || ||| | || || | || |||| |||| | | || || || Sbjct 81735 TCTCTTCG-AC-TTCTCGACCTCTCTTCTAAGCTTCTGAAGGGCTCTCTTGTCAGACTTT 81678 Query 282137 AAATCTGTTTTATAT-TTTCTCTTGAA-ATCTTCAACACACCATGTTACAAGACGATT-- 282192 | ||| ||| | | ||| ||||| ||||| | | || | || || | Sbjct 81677 ACATCC-TTTCCTGTCTTTGACTTGATGATCTTGATAAAG---TGGTCCATAACTCTCTG 81622 Query 282193 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 282252 ||| ||||| ||||||||||| | |||| || ||||| || | ||||| || Sbjct 81621 ATCGAAATCCTCACCTCCCAAATGGGTATCACCACTTGTAGCAACGACCTCGAAAACGCC 81562 Query 282253 ATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 282312 | |||| | ||| |||| ||||||| || |||||||||| ||| | | | | Sbjct 81561 GTTATCAATGGTCAAGAGAGAAACATCAAAAGTACCACCACCCAAATCGTATACTA--AA 81504 Query 282313 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 282372 || | |||| | ||| | ||||| | |||| | |||| || || || ||||| || Sbjct 81503 ATGCTCTTCTCAG-CTT---TCTTATCCAAACCAAAAGCAATTGCTGCTGCTGTTGGCTC 81448 Query 282373 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 282432 ||||||||| | | ||||| | ||||||||| || ||||| || || || || | Sbjct 81447 ATTAATAATACGGATTACATTCAAACCAGCAATAGCACCAGCATCCTTGGTAGCCTGACG 81388 Query 282433 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAAT 282492 || | ||| ||||| || || || |||||||| || |||| ||||||| || || | Sbjct 81387 CTGAGCATCATTAAAGTAAGCTGGGACAGTAATTACTGCATGCTTTACTTCCTTACCGAG 81328 Query 282493 ATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGA 282552 |||||| || ||| |||||| || || | ||| | |||| | |||||| | Sbjct 81327 ATAAGCCTCAGCAATTTCTTTCATCTTGAGCAAGACCATAGCGGAAACCTCTTCTGGGGC 81268 Query 282553 ATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAAT 282612 ||||||| ||| | | || |||| | || || || || | ||||| Sbjct 81267 TAATTGCTTCTTCTCACCCTTAACAGAAACTTGTATGTAAGGCTTGCTATCTTTGTTAAT 81208 Query 282613 AACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACC 282672 || | | |||| | | || |||| ||| ||| | || |||||| | ||| Sbjct 81207 AATCTCATATGGTAACAAAGTCTTATCCTTTTGGACAGAATCATCCTTAAAACGACGACC 81148 Query 282673 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGC 282732 ||| | || ||| | || || | ||| | |||||| | | |||||||| ||||| Sbjct 81147 AATAAGTCTCTTTACGTCGAACAAAGTCTGAACTGGATTGATAGTAGCTTGATTCTTGGC 81088 Query 282733 TGCATCTCCAATCAGATGT-TCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGAT 282791 || || ||||||| || | || || || ||||| ||||||||||| || | |||| Sbjct 81087 TGATTCACCAATCA-ATCTCTCATCATCAGTGAATGATACATATGATGGTGTAATACGAT 81029 Query 282792 TACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAA 282851 ||||||| ||||| | |||||| || ||| ||||||| | | | ||| ||||| | Sbjct 81028 TACCTTGTTCATTTGGAATAATCTCTACTCTACCATTCTTGTAGATACCAACACATGAAT 80969 Query 282852 AAGTTGTTCCTAAATCAATACCAATA 282877 |||| || |||||||| ||||||||| Sbjct 80968 AAGTAGTACCTAAATCGATACCAATA 80943 Score = 102 bits (112), Expect = 6e-16 Identities = 269/403 (67%), Gaps = 22/403 (5%) Strand=Plus/Plus Query 68852 TTGTCGCCTACCATTTGTTTCAATCTCTGATAATATGTCGGACCAATAAAAATTTTA-AC 68910 || ||| | ||||| ||||| | ||||||||| || || || |||||||| ||| | || Sbjct 826815 TTATCGTCAACCATATGTTTTAGTCTCTGATAGTAAGTTGGCCCAATAAAGATTCTCGAC 826874 Query 68911 TGGTAATTTTTTACCATTCATTCCATTATACATAGTTTCATTACCCCATTCTTCATAACC 68970 | ||| | || || | ||||| ||||| |||||| || ||| ||| || | Sbjct 826875 TCC-AATCTCTTTCCCGTATGGCCATTGTACATTACTTCATTTCC--ATTTTTCTGAAAC 826931 Query 68971 AGCAGCAACTAATTCATCGT-TA---ATGGCATTAAGATCAACACTTGTAAATGGTGTTG 69026 | | ||||| | | || || || | | || || | ||||| || |||| Sbjct 826932 --CCGGAACTATGTAAACGGCTAGATATCTCTTCAACTGTAATTTTCGTAAAAGGAGTTG 826989 Query 69027 CATCGCCATACACTCCTTTAACTGCACATAGTTTTCCTAATAAACATTCAATAAGTTGCC 69086 ||||||| | || ||||| || ||| || ||| || | || ||||||||| | || | Sbjct 826990 CATCGCCCTCCAATCCTTGAATTGCGCACGCTTTGCCAAGTAGACATTCAATTAAATGGC 827049 Query 69087 CAATAGTCATACGTTTGGGCATACAATTAGGATTGATAATAATATCGGGAATTAATCCAG 69146 |||| |||||||| || ||| || |||||| |||||||| || ||||| | ||| Sbjct 827050 CAATTGTCATACGCGAAGGAATAGCATGAGGATTCATAATAATGTCTGGAATAATCCCAT 827109 Query 69147 ATTTACTGAATAACATATCTGCTCGATGAGCTTTGTAT------CCAATGGTACCTTTTT 69200 || | ||| |||||| ||| || | ||||| || || ||||| |||| Sbjct 827110 CTTGTGTAAATGGCATATC--CTC----AGTTCTGTATGTTATACCGATTGTACCCTTTT 827163 Query 69201 GACCTGCTCTTGACGAAAATTTATCACCTACATTGGGAATTCT 69243 | || ||| || | ||| ||||| || |||| || ||||| Sbjct 827164 GGCCATGTCTAGATGCAAACTTATCTCCAACATGAGGTATTCT 827206 >seq3 Length=1102581 Score = 147 bits (162), Expect = 2e-29 Identities = 337/493 (68%), Gaps = 27/493 (5%) Strand=Plus/Plus Query 281322 ATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTAT 281381 |||||| ||||||||| |||||| ||||||||| | | || | | ||| || || Sbjct 859935 ATTCTTCAGCTTCTCTGATCATTTTCTCAATTTCAGCACCACTTAGACCTCCA-GAAGAT 859993 Query 281382 TAGTAATAGTAATATTCTTGGATTTGTTT---GTTGATTTATCAGCGGCAGTCACATTAA 281438 | |||||| || | | || ||| ||| ||||| |||||| ||| ||||| | Sbjct 859994 TG--AATAGTGATCT-CGTG--TTTCTTTCCAGTTGACTTATCAATTGCACCAACATTCA 860048 Query 281439 GAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAG 281498 ||| ||||| ||||| | |||||| ||||||||||||||||| |||||||| | || | Sbjct 860049 TAATTCCATTTGCATCAATATCAAAGGTGACTTCAATTTGAGGAACCCCTCTGGGTGCTG 860108 Query 281499 GTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTT 281558 | || || || || | |||| ||| || |||||||| || |||| || || Sbjct 860109 GAGGAATTCCCATCATTTCAAATTGTCCAAGCAACTTATTATCAGCAGCAAATTCTCTTT 860168 Query 281559 CACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTC 281618 | || | ||||| || || |||| ||||||||| |||| | ||| | |||||| Sbjct 860169 CTCCTTGGAAAACTTTAATTCCAACTTGAGTTTGATTGTCTGCAGCAGTGGAGAATACT- 860227 Query 281619 TGGAT-TTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTG-GTCATAATACCACC 281676 ||| | |||||| || ||||| || ||||| | ||| | || | || | || ||||| Sbjct 860228 TGGCTCTTTTTAGTGGGTATTGTGGTATTTCTGTTAATTA-ATCGAGTAAAAACTCCACC 860286 Query 281677 AGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT-TTTGAAGTT 281735 ||||| | ||| | ||| | || || || || | || | || || |||| Sbjct 860287 CAAAGTTTCAATACCTAAAGATAAGGGTGTAACGTCGAGTAACAAAAGATCCTTGA---- 860342 Query 281736 TTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 281795 |||| || || ||| || | | ||||| |||||||| || ||||||||||| Sbjct 860343 TTTC-TCCCTT----CAA----AACACCAGCTTGTATAGCAGCTCCCATTGCAACAGCTT 860393 Query 281796 CATCAGGATTAAC 281808 | ||||| ||||| Sbjct 860394 CGTCAGGGTTAAC 860406 Score = 96.9 bits (106), Expect = 3e-14 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 86119 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 86178 |||||||||||||||||||| ||||| |||||||| ||| | |||| ||| || || Sbjct 860945 CCGTATGCAAGAGCTGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAGCCTGCT 861004 Query 86179 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 86238 || ||| ||| ||||||||| | ||| | |||||||| || ||||| |||||| Sbjct 861005 ATAGAGCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTA 861064 Query 86239 ATAACTGC 86246 ||||| || Sbjct 861065 ATAACAGC 861072 Score = 93.3 bits (102), Expect = 3e-13 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 || || |||| ||| || || ||||| |||||||| ||||| ||||| | || || Sbjct 860945 CCGTATGCAAGAGCTGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAGCCTGCT 861004 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463 || || ||||| ||||| ||||| | || ||||| ||||| || || || |||||| Sbjct 861005 ATAGAGCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTA 861064 Query 282464 ATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTT 282519 ||||| |||| |||| | | |||| ||||| || |||| ||||||||| Sbjct 861065 ATAACAGCATGCTTTACACTTCTACCAAGATAAGTTTCGGCAGTTTCTTTCATTTT 861120 >seq4 Length=1103974 Score = 118 bits (130), Expect = 8e-21 Identities = 334/503 (66%), Gaps = 15/503 (3%) Strand=Plus/Plus Query 401131 TATTATGATTTCATTCACAAAGAACTTATTACTTTTTCTGTGGATGACGTTCT--TAGAT 401188 |||| |||||| ||||| ||||||||| | || || || ||| | || ||||| Sbjct 213462 TATTTTGATTTTATTCATAAAGAACTTGTA--TTATTTAGTAGATATGATACTACTAGAT 213519 Query 401189 CTGTTCCTAATTTAATGGATGGATTTAAACCATCACATCGCAAAGTATTTTATGGTTCTG 401248 || |||| |||||| | ||||| || ||||| ||| | |||||| ||| || | Sbjct 213520 CTATTCCAAATTTATTAGATGGTTTAAAACCTGGACAAAGAAAAGTACTTTTTGCAACAT 213579 Query 401249 TTGAAAAGAATATTTATAAGCAAGAGATTAAAGTATCAGATTTGACTGGTTTTGTCTC-G 401307 || |||| || || |||| || ||||||| || | || |||||| ||| | | Sbjct 213580 TTAAAAAAAAGCTTAATAATGAAC---TTAAAGTTGCACAATTAGCTGGTTATGTTGCTG 213636 Query 401308 AATATGACGAAATATCATCATGGTGATCAATCATTATCATCAACTATTGTCGGAATGGCT 401367 || || | ||||||||||| || ||||||| | |||||||| |||||| Sbjct 213637 AACATAGTGCT-TATCATCATGGAGAATCATCATTACAAAGTACTATTGTTAATATGGCT 213695 Query 401368 CAAAATTATGTGGGAAGTAACAATCTCAATTTGTTAATGCCATTGGGAATGTTTGGATCT 401427 ||||||| ||| |||||||| ||||| ||| ||||| |||| || ||||| | Sbjct 213696 CAAAATTTTGTTGGAAGTAATAATCTAAATCTGTTAGAACCATGTGGTCAATTTGGTAGT 213755 Query 401428 AGATTGACCGGAGGTAAAGATTCAGCGAGTCCTAGGTATTTGAACACTAAATTAGATGAT 401487 ||| || || |||||| || | || | ||| | ||||| || | | Sbjct 213756 AGAAAAGAAGGTGGAAAAGATGCAAGTGCTGCTCGTTATATATTTACTAAGCTATCTAAA 213815 Query 401488 TTGGCAAAGAAAATCTTCATTGATTATGATTTTGATATTCTTCAACATCAGTCAGAAGAT 401547 | | | | | || ||| || |||| | | || || ||| | | | | | ||| Sbjct 213816 TGGACTAGATATATTTTCCCAGAGGCTGATGATCCT-TTATT-AAC-TTATTTATATGAT 213872 Query 401548 AATTG---TCGAATTGAACCTGTTTATTATGCTCCTATTATTCCAATGATACTTGTAAAT 401604 || | | |||||||||| | ||||||| ||| || ||||||||||| | |||||| Sbjct 213873 GATGGACAACAAATTGAACCTTTATATTATGTTCCAATAATTCCAATGATTTTGGTAAAT 213932 Query 401605 GGAGCTGAAGGAATTGGTACTGG 401627 || |||| ||||||||||| || Sbjct 213933 GGTACTGATGGAATTGGTACAGG 213955 Score = 98.7 bits (108), Expect = 7e-15 Identities = 223/340 (66%), Gaps = 33/340 (10%) Strand=Plus/Plus Query 399172 ATTACTTATGTACCTGGTCTATATAAAATTTATGATGAAGTAATTGTAAATGCGGCAGAT 399231 |||| ||||||||||||| ||||||| |||| ||||||| | | || ||||| || ||| Sbjct 211257 ATTAATTATGTACCTGGTTTATATAAGATTTTTGATGAAATCTTAGTTAATGCTGCTGAT 211316 Query 399232 CATAA--CAAGAGA-------------------------TGTCAAACATGTAATATTATC 399264 ||| | ||||| | | ||| ||||| | ||| Sbjct 211317 GTTAAAGCTAGAGAAATTTCAACTAAAAATAATCATATTTTTGAAAAATGTACTTGTATT 211376 Query 399265 AAAGTTGATATCGATC---AAAAAACAGGTCAAATTTCTGTTTGGAATAATGGTGATGGT 399321 |||||||| || || |||||| || ||||| |||| | ||| |||| || || Sbjct 211377 AAAGTTGAAATTAATAGAGAAAAAAAAG---AAATTACTGTATTTAATGATGGAGAAGGA 211433 Query 399322 ATTGATGTAGCAATTCATAAAGAACATAATATATGGGTACCATCAATGATTTTTGGAGAA 399381 || | | ||| |||| ||||||| | ||| || ||| | | ||||||||| | Sbjct 211434 ATACCAATTGAAATACATAGAGAACATCAAGTATATGTTCCAGAATTAATTTTTGGACAT 211493 Query 399382 CTTTTAACGTCTACTAATTACGATAAAAACGAGGAAAAAACTGTTGGTGGTAAAAATGGT 399441 | ||||| ||| |||||| ||| | || || || | | | ||| || | ||||||| Sbjct 211494 TTATTAACTTCTGATAATTATGATGATAATGAAGATAGAGTTACTGGAGGAAGAAATGGT 211553 Query 399442 TTTGGCGCTAAGCTTGCTAATATTTATTCTGTTGAATTTA 399481 ||||| || || ||| ||||||| | ||| ||||||| Sbjct 211554 TTTGGAGCAAAACTTACTAATATATTCTCTAAAGAATTTA 211593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740629810850712