Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20meleagridis_20[genbank_20GCA_5F001593445.1_202016- 03-17] 57 sequences; 8,973,200 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq6 87.8 1e-12 >seq6 Length=322908 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 18827 CTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCG 18886 || || || | |||||| || |||||||| || ||||||||||| | | ||| || | Sbjct 207071 CTCAATACTAAGTGCAAAGTGGACTCCTTCTGGATATTGTAATCAGATAGAGTTCTGCCA 207012 Query 18887 TCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTG 18946 || |||| || || || ||| | || | | ||| ||||| || | |||||| || Sbjct 207011 TCTTCCAATTGCTTTCCAGCAAAGATCAAACGCTGTTGATCAGGAGGAATGCCCTCCTTA 206952 Query 18947 TCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATG 19006 || || || ||||| | | | |||||| ||| || ||| | || ||| Sbjct 206951 TCCTGGATCTTTGCCTTTACATTCTCAATAGTATCCGAAGGTTCAACTTCCAATGTGATG 206892 Query 19007 GTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATTTT 19044 || || ||||||| |||||| |||||||||||||| || Sbjct 206891 GTCTTCCCTGTTAGAGTTTTAACAAAAATTTGCATCTT 206854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414572512001458