Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20meleagridis_20[genbank_20GCA_5F001593445.1_202016- 03-17] 57 sequences; 8,973,200 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq6 91.5 1e-13 >seq6 Length=322908 Score = 91.5 bits (100), Expect = 1e-13 Identities = 166/240 (69%), Gaps = 5/240 (2%) Strand=Plus/Minus Query 16702 CATTTAC-CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGT 16760 || |||| || |||| || |||| ||| | |||| ||||||||||| || || |||| Sbjct 207091 CAATTACACCACCTCTAAGTCTCAATACTAAGTGCAAAGTGGACTCCTTCTGGATATTGT 207032 Query 16761 AGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGT 16820 | || | | ||| || | || |||||||| || || ||| | || | |||||||| | Sbjct 207031 AATCAGATAGAGTTCTGCCATCTTCCAATTGCTTTCCAGCAAAGATCAAACGCTGTTGAT 206972 Query 16821 CCACAGGCACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCC 16878 | ||| | |||||| || || || ||||| ||| || | | | ||| || Sbjct 206971 CAGGAGGAATGCCCTCCTTATCCTGGATCTTTGC--CTTTACATTCTCAATAGTATCCGA 206914 Query 16879 GGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 || || ||||| |||||||| || || || || ||||| |||||||| ||||| || Sbjct 206913 AGGTTCAACTTCCAATGTGATGGTCTTCCCTGTTAGAGTTTTAACAAAAATTTGCATCTT 206854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087718590430