Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20meleagridis_20[genbank_20GCA_5F001593445.1_202016- 03-17] 57 sequences; 8,973,200 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq23 228 3e-54 seq45 156 2e-32 seq41 152 2e-31 seq11 149 2e-30 seq39 143 1e-28 seq6 138 4e-27 seq36 109 2e-18 seq17 109 2e-18 seq51 100 1e-15 seq48 100 1e-15 seq18 87.8 7e-12 >seq23 Length=109376 Score = 228 bits (252), Expect = 3e-54 Identities = 484/714 (68%), Gaps = 14/714 (2%) Strand=Plus/Minus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 ||| ||||| |||||| | || || || | |||||||| ||||| | ||| | | Sbjct 100501 AGCTATTGGTATTGATTTAGGTACAACATACTCATGTGTTGGTGTATGGAGAAACGATAC 100442 Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTAC 451032 |||||| ||| | ||||||| ||||| || || || || || | ||| ||||| Sbjct 100441 TGTAGATATTGTTCCAAATGATCAAGGTAACCGTACAACACCATCTTATGTAGCATTTAC 100382 Query 451033 GGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAA 451090 || | || | ||| | || | || || || ||||| || | ||| | || Sbjct 100381 AGAAACTGAGCGTCTTATTGGTGATGCAGCGAAGAATCAA--GTTGCTAGAAACCCAGAA 100324 Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150 || ||||| | ||||||||| ||| | ||||| | | || ||||||| | | |||||| Sbjct 100323 AATACAGTTTTTGATGCTAAGCGTCTTATTGGTAGAAAGTTTGATGATCAAGCAGTACAA 100264 Query 451151 AAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAA---TCAAAAAGGAAAGCCCTATATT 451207 | || | | || | | | | ||||| | || ||| ||| | || || | Sbjct 100263 AGTGATATGACTCACTGGCCATTTAAAGTAGTTAGGGGTCCAAA-GGACAAACCAATCAT 100205 Query 451208 CAA-GTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGT 451266 || || | || ||||||| || || | ||||||||||||| ||||||| Sbjct 100204 CAGTGTGAGCTACTTGGGTGAAAAGAAGGAGTTCCATGCTGAAGAAATTTCTGCTATGGT 100145 Query 451267 TCTTACTAAA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAG 451325 ||||| || ||||| |||| | ||| ||| | || ||| ||| |||| | Sbjct 100144 -CTTACAGAAGATGAAGGAAATCTCTGAAGCATACTTGGGCCGCCCAATTAAGAATGCTG 100086 Query 451326 TAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGAC 451385 || |||||||||| ||||| |||||||| ||||||| |||||||| || ||||| || Sbjct 100085 TAGTTACTGTTCCAGCTTACTTCAATGACTCACAACGTCAAGCAACAAAGGATGCTGGTG 100026 Query 451386 ATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCAT 451445 ||||||||||| ||||| | |||| ||||| || || || ||||||||| | || | Sbjct 100025 CAATTGCTGGTTTGAATGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTGCCT 99966 Query 451446 ATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTG 451505 |||| || | || |||| ||| | || | |||| | || | || ||||| |||| Sbjct 99965 ATGGTCTTGATAA---GAAAGGAACTGGTGAGAGAAATGTATTGATCTTCGATTTAGGTG 99909 Query 451506 GAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAA 451565 | || ||| |||| || || | | ||||||||||| | |||||||| ||||| | Sbjct 99908 GTGGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTCAAGGCTA 99849 Query 451566 CCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGAAT 451619 || |||||||||||| | || ||||||||| ||||||| | |||| |||| Sbjct 99848 CCGCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAACAGACTTGTTGAAT 99795 >seq45 Length=133594 Score = 156 bits (172), Expect = 2e-32 Identities = 169/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||||||||| || |||| || || || || ||| | || ||||| | || Sbjct 55064 ATGCAGATTTTCGTTAAGACCTTGACAGGAAAGACCATCACTTTAGAAGTTGAGCCTTCA 55123 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || | |||| ||| ||||||||||||||||||||||| ||||||||| Sbjct 55124 GATACTATCGAGAATGTTAAGGCAAAGATTCAAGATAAGGAAGGAATTCCACCTGATCAA 55183 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || |||| |||||| | || ||||| |||||| | | ||||| || Sbjct 55184 CAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAAC 55243 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || | ||||||||||| ||||| ||||| Sbjct 55244 ATTCAAAAAGAGTCCACTTTACACTTAGTATTGAGACTTAGAGG 55287 Score = 143 bits (158), Expect = 1e-28 Identities = 166/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| ||||| || |||| || || ||||| ||| | || |||||| | || Sbjct 54608 ATGCAGATTTTTGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTCA 54667 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || | |||| ||| ||||||||||||||||||||||| ||||||||| Sbjct 54668 GATACTATCGAGAATGTTAAGGCAAAGATTCAAGATAAGGAAGGAATTCCACCTGATCAA 54727 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || |||| || ||| | || ||||| ||||| | | ||||| || Sbjct 54728 CAACGTTTGATCTTTGCAGGAAAGCAATTAGAGGATGGTAGAACCCTCTCTGATTACAAC 54787 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || | || |||||||| ||||| || || Sbjct 54788 ATTCAAAAAGAGTCTACCTTACATTTAGTATTGAGACTCAGGGG 54831 Score = 129 bits (142), Expect = 2e-24 Identities = 163/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || |||| || || || || ||| | || ||||| | || Sbjct 54836 ATGCAGATTTTCGTCAAGACTTTGACGGGAAAGACCATCACTTTGGAAGTTGAGCCTTCA 54895 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| |||| ||| |||||||||||||| || || || ||||||||| Sbjct 54896 GATACAATTGAGAACGTTAAGGCAAAGATTCAAGATAAGGAGGGGATACCACCTGATCAA 54955 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || |||| |||||| | || ||||| |||||| | | ||||| || Sbjct 54956 CAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAAC 55015 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || | || |||||||| ||||| || || Sbjct 55016 ATTCAAAAAGAGTCTACCTTACATTTAGTATTGAGACTCAGGGG 55059 >seq41 Length=345200 Score = 152 bits (168), Expect = 2e-31 Identities = 234/331 (71%), Gaps = 11/331 (3%) Strand=Plus/Plus Query 451274 AAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 |||||||||||||| || ||| ||| ||||| || | |||| || |||||| Sbjct 72425 AAAATGAAAGAAACTGCTGAAACTTATCTTGGTAGAAGTGTAAAGCATGCTGTTATTACT 72484 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || || || || || |||||| | || || ||||||||||| ||||| || ||| || Sbjct 72485 GTACCAGCCTACTTTAATGATTCTCAGCGTCAAGCAACTAAGGATGCTGGCTCTATAGCA 72544 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTA 451453 || |||||||| |||| |||||||| || |||||||| || || ||||| ||| | Sbjct 72545 GGCTTAAATGTGACAAGAATCATTAATGAGCCAACAGCAGCAGCCCTGGCATACGGAAT- 72603 Query 451454 GGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACT 451513 ||||| || |||| | |||| || ||| | ||| || || ||||| || Sbjct 72604 GGAAA--------AAGCAGATGGCAAAACAATCGCAGTTTATGACTTGGGAGGAGGTACC 72655 Query 451514 CATGATACTTCTGTACTTTCA-ATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGG 451572 ||||| |||| | ||| | ||| | ||| || |||||||| || ||||||||||| Sbjct 72656 TTTGATATTTCTAT-CTTAGAGATTCTTGGTGGAGTGTTTGAAGTTAAAGCAACCAATGG 72714 Query 451573 TGATACTCATCTAGGAGGTGAAGATATTGAT 451603 ||||| |||||||| ||||| ||||| Sbjct 72715 AAATACTTCCCTAGGAGGAGAAGACTTTGAT 72745 Score = 109 bits (120), Expect = 2e-18 Identities = 272/409 (67%), Gaps = 22/409 (5%) Strand=Plus/Plus Query 451988 GTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGT 452047 || || ||||| |||||||||||| || ||||| | ||||| | | || | | ||| Sbjct 73139 GTTAACCCTGACGAAGCTGTTGCAATGGGAGCTGCTATACAAGCCGGTGTTTTGA-AGG- 73196 Query 452048 TCAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGA 452107 || |||| | | ||| || ||||| | || || ||||| ||||| | || Sbjct 73197 ---------GAGAAATCAAG-GATCTTTTGTTACTCGACGTTACACCCTTATCTTTAGGT 73246 Query 452108 GTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGT 452167 | ||||| || ||| | | ||| |||||||| || ||| | || || | Sbjct 73247 ATAGAAACTTTGGGAGGAGTTTTTACTCGATTAATTAATAGAAATACTACAATCCCCACT 73306 Query 452168 AAAAAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACC---AGGTGTAACTATTCAA 452224 |||||||| ||| ||| || || ||||||||| | || || || || || Sbjct 73307 AAAAAGAGCCAAGTATTCTCCACTGCTGCAGATAACCAAACTCAAGTTGGAATTA---AA 73363 Query 452225 GTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTT--ACTC 452282 || || |||||||| | | | | | ||||||||| || ||| ||||| | | Sbjct 73364 GTTTTCCAAGGAGAAAGAGAATTTGCTGCAGATAATAAGTTGCTTGGACAATTTGAAATG 73423 Query 452283 TTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTG 452342 || || ||||||| ||| || || ||||||||||||| | |||| |||| ||| Sbjct 73424 ATTGGAA--TTCCTCCAGCGCCTAGAGGGGTTCCTCAAATTGAAGTCACCTTTGATATTG 73481 Query 452343 ATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAA 452391 |||||||||| ||| | ||||| |||| |||| || ||| ||||||| Sbjct 73482 ATGCAAATGGAATTATGAATGTTGGTGCCATTGACAAGTCAACTGGAAA 73530 >seq11 Length=225008 Score = 149 bits (164), Expect = 2e-30 Identities = 328/486 (67%), Gaps = 13/486 (3%) Strand=Plus/Plus Query 364565 TATTCCATCTTTAGTTGATGGATTTAAACCTTCTCAAAGAAAAATTTTTTATGGAGCAAA 364624 ||||||| |||| | ||||| || |||||| ||||||||| | ||| || | | Sbjct 75143 TATTCCAAATTTATTAGATGGTTTAAAACCTGGACAAAGAAAAGTACTTTTTGCAACC-- 75200 Query 364625 TTTAAGAGGATTAGAAAAAGATCAAGTAAAAGTAGCTCAATTAGCAGGTTTTGTATCTGA 364684 ||||| | | || | || || | ||||| || |||||||| |||| ||| |||| Sbjct 75201 TTTAAAAAAAAGCTTAATA-ATGAACTTAAAGTTGCACAATTAGCTGGTTATGTTGCTGA 75259 Query 364685 CCGGGTAGCTTATCATCACGGTGAGGCAAGTTTAATGGGAGCAATAATTGGAATGGCACA 364744 | ||||||||||| || || || ||| | |||| || |||||||| Sbjct 75260 ACATAGTGCTTATCATCATGGAGAATCATCATTACAAAGTACAATTGTTAATATGGCACA 75319 Query 364745 AAATTTTGTTGGAAGTAATAATGTAAATTTACTAGAACCAAAAGGACAATTTGGAAGTCG 364804 |||||||||||||||||||||| ||||| ||||||| ||| || |||||||| ||| | Sbjct 75320 AAATTTTGTTGGAAGTAATAATCTAAATCTACTAGAGCCATGTGGTCAATTTGGTAGTAG 75379 Query 364805 --AGTAATGGGAGGTAAAGATTC---TGCCAGCCCACGTTATATTTGGACCAAACTTGAA 364859 || || || || |||||| | ||| | |||||||| | || ||||| Sbjct 75380 AAAGGAA--GGTGGAAAAGATGCAAGTGC---TGCTCGTTATATATTTACTAAACTATCT 75434 Query 364860 AAAGTGGCAGGATTAATATTTAGAAAAGAAGATAATCCAATTTTAAATTATATTAATGAT 364919 ||| | | ||| || || | | | ||| |||| | |||| |||| | ||||| Sbjct 75435 AAATGGACTAGATATATTTTCCCAGAGGCTGATGATCCTTTATTAACTTATTTGTATGAT 75494 Query 364920 GATGGATTAATGGTTGAACCTGAATTTTATCTTCCTATTATTCCTATGATTTTAGTAAAT 364979 |||||| | |||||||| || ||| | || || ||||| |||||||| |||||| Sbjct 75495 GATGGACAACAAATTGAACCTTTATATTACGTACCAATAATTCCAATGATTTTGGTAAAT 75554 Query 364980 GGAGCAACAGGCATTGGTACTGGTTTCTCCACCTCAATCCCTTGTTACCATCCACAAGAA 365039 || | || |||||||| |||| | ||| | ||| ||| ||||| |||| Sbjct 75555 GGTACTGATGGAATTGGTACAGGTTGGAGTAGTTCAGTTCCTAATTATAATCCAAAAGAT 75614 Query 365040 TTAATT 365045 ||||| Sbjct 75615 ATAATT 75620 Score = 122 bits (134), Expect = 3e-22 Identities = 398/597 (67%), Gaps = 40/597 (7%) Strand=Plus/Plus Query 363743 AGGAATTCCTAAACTAGAAGATGCTAATAAAGCAGGAACAAAAGATGCTCATAAATGTGG 363802 |||||| || ||||| |||||||| || |||| || | || || | |||||| Sbjct 74333 AGGAATCCCAAAACTTGAAGATGCAAACGAAGCTGGTGGACCCCATTCTAAAAAATGTAC 74392 Query 363803 A-TTATATTTAGCAGAGGGAGATTCTGCTCT---TTCTATGATTCTGTCAGGGTTATCAA 363858 ||||| ||| | || || ||||||||| |||| || ||| |||| ||||| | Sbjct 74393 TCTTATACTTA-CTGAAGGTGATTCTGCTAAAACTTCT-TG--TCTTGCAGGATTATCTA 74448 Query 363859 GTAAAGATAGAAATTTTTATGGTGCCTTTCCGTTAAAAGGAAAATTATTAAATGTAAGAG 363918 | | |||| | | || ||| | ||||| ||| || ||| | |||||||| |||| Sbjct 74449 TTGTTGGTAGAGACTATTTTGGAGTATTTCCATTACGGGGTAAACTTTTAAATGTTAGAG 74508 Query 363919 AAGCATCAGTTAAACAAATTATGGGAAATGATGAGATATCAAACCTTaaaaaaaTTTTAG 363978 | || ||| |||||||| || | |||| ||| ||| ||| || ||||| || | Sbjct 74509 AGGCTTCATTTAAACAACAAATTAGTAATGTTGAAATACAAAATATTCTTAAAATATTGG 74568 Query 363979 GATTACGTAATGAATTTAAATATGAAATGGATGAAGAATTTAATACTTTAAGATATGGAA 364038 ||||| ||| || | |||||||| | ||| | | | ||| ||||||||||| Sbjct 74569 GATTATGTATTGGACAAAAATATGATA---ATGGACCAGTCAAT---TTAAGATATGGTT 74622 Query 364039 AAGTAATAATTTTATGTGATTCAGATGTAGATGGAAGTCATATTAAGGGACTAATTTTAA 364098 |||| | | |||| |||| ||||| || |||||||| ||||| ||| | | Sbjct 74623 CTTTAATGCTAATGACTGATCAAGATCATGATGGTAGCCATATTAAAGGACTCATTATCA 74682 Query 364099 ATATGTTTCAT-AGTATGTGGCCTAATCTT-TTAAAAAGAGAAGGTT-TTATTACAACTA 364155 || | | ||| | ||| ||||| | | | || | ||| | || ||| |||| | Sbjct 74683 ATTTAATACATTATTAT-TGGCCAAGTTTAATTCATTTTAGAGGATTCTTAAAACAATT- 74740 Query 364156 TGAACACTCCAATTGTTAAAGCAACAAAAGGA---AAAGAAATATTAAAATTTTATAATT 364212 || |||||| || |||||||| | |||||| || ||||| | | || | || || Sbjct 74741 TGT-CACTCCTATCGTTAAAGCCAAAAAAGGTTCTAATGAAATCTCA---TTCTTTACTT 74796 Query 364213 TAACTGATTATGATAATTGGAGAAATGATAATA----ATAC--AAAAGGATATTATATTA 364266 || ||| ||||| | |||||||| |||| | || ||| |||| | ||| Sbjct 74797 TATATGAATATGAACAATGGAGAAAAAGTAATTCATCAAACTTAAATGGATGG-AGATTC 74855 Query 364267 AA-TATTACAAAGGATTAGGAACATCT---GATTCTAAAGAAGCTAAAGAATATTTT 364319 || ||||| ||||| ||||| |||||| ||| | ||| ||||||||||||| Sbjct 74856 AAGTATTATAAAGGTTTAGGTACATCTACAGATCTT---GAATTTAAAGAATATTTT 74909 >seq39 Length=423162 Score = 143 bits (158), Expect = 1e-28 Identities = 445/684 (65%), Gaps = 15/684 (2%) Strand=Plus/Minus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 ||||| || ||| | || || || | ||||||||| ||| | ||| | ||||| | ||| Sbjct 342607 ATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAGAGTA 342548 Query 450977 GAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGAT 451036 || ||||| ||||||| ||||| || | ||| || |||| ||| || || ||| Sbjct 342547 GAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCACTGAT 342488 Query 451037 TCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAAAACA 451094 || ||| | | || | | || || ||||| | | | ||| | | | Sbjct 342487 GATGAGAGATTAATTGGTGAGTCAGCCAAGAATCAA--GCCACTATCAATCCAGTTCAGA 342430 Query 451095 CAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAG 451154 | | | |||| || | | ||||||||| | | | |||||| | || ||||| | Sbjct 342429 CTTTGTTCGATGTAAAGAGACTTATTGGCCGTCGTTTTAAGGATGATTCCGTTCAAAAGG 342370 Query 451155 AGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTAA 451214 | || | || || | ||||| | | || | || || || || || ||||| Sbjct 342369 ATAAGACTTTGTTGCCATATGAAATTATTAACAGGGATGGGAAACCTTACATACAAGTTT 342310 Query 451215 ATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTA 451274 | ||| ||||| | || || ||||| ||||| |||| ||||||| |||| | Sbjct 342309 CTGTTAAGGGTGAGAAGAAGCAATTAGCTCCAGAAGAGGTTTCTGCTATGGT-CTTAGTC 342251 Query 451275 AA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 || ||||| |||| || || ||| ||||| ||| | |||||||||||||| Sbjct 342250 AAGATGAAGGAAATCGCTGAGGCTTATCTTGGTAAGGAAGTAAAGCATGCAGTAATTACT 342191 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || || ||||| || ||||| || || || ||||| || || ||||| || ||||||| Sbjct 342190 GTCCCAGCTTACTTTAATGACGCTCAGCGTCAAGCTACCAAGGATGCTGGTGCTATTGCT 342131 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTA 451453 || || ||||| | || |||||||| || || |||||||| || | || | || | Sbjct 342130 GGCTTGAATGTAATCCGTATTATTAACGAGCCAACAGCAGCAGCAATTGCTTTCGGTTTG 342071 Query 451454 GGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACT 451513 | | ||||| | || || | |||||||||| ||||| ||||| || ||| Sbjct 342070 G-------ATAAGAA--GGCTGAGAAGAGCATTTTAGTATACGATTTGGGTGGTGGTACT 342020 Query 451514 CATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGT 451573 |||| |||| | | | ||||| | || || || || || || || | ||| Sbjct 342019 TTTGATGTTTCTCTCTTGACCATTGATAACGGTGTTTTCGAGGTCGTTGCTACAAGCGGT 341960 Query 451574 GATACTCATCTAGGAGGTGAAGAT 451597 ||||| || | |||||||| ||| Sbjct 341959 GATACCCACTTGGGAGGTGAGGAT 341936 >seq6 Length=322908 Score = 138 bits (152), Expect = 4e-27 Identities = 165/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| |||||||| || || || || || || || | || |||||| | || Sbjct 206857 ATGCAAATTTTTGTTAAAACTCTAACAGGGAAGACCATCACATTGGAAGTTGAACCTTCG 206916 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | | || ||| || || |||||||| || ||||||||||||||| Sbjct 206917 GATACTATTGAGAATGTAAAGGCAAAGATCCAGGATAAGGAGGGCATTCCTCCTGATCAA 206976 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||||| || || | || || ||| | |||||||| |||||| | | ||||| ||| Sbjct 206977 CAGCGTTTGATCTTTGCTGGAAAGCAATTGGAAGATGGCAGAACTCTATCTGATTACAAT 207036 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || | ||||||||||| ||||| ||||| Sbjct 207037 ATCCAGAAGGAGTCCACTTTGCACTTAGTATTGAGACTTAGAGG 207080 >seq36 Length=17887 Score = 109 bits (120), Expect = 2e-18 Identities = 129/172 (75%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 412289 TTCCAAAACGACCACTTCTACCAATTCTATGTATAAAAGTTTCATGATTTTTAGGTAAAT 412348 ||||||| | || ||||| ||||||||||| ||| | ||| | ||| ||||||| || Sbjct 2339 TTCCAAATCTGCCGCTTCTTCCAATTCTATGAATATATAATTCTTTATTATTAGGTAGAT 2280 Query 412349 CATAATTTATAACTAATTTAACCTCAGGAATATCTATCCCCCGTGCTAATAAATCAGTTG 412408 | || |||| |||||| || || | | | ||| || || | | | ||||||| |||| Sbjct 2279 CGTAGTTTACAACTAAGTTGACTTGTTGTACATCAATGCCTCTTCCCCATAAATCTGTTG 2220 Query 412409 TTAATAAAATTCGTGTTTTTCCCTCTCTAAATTCATCTACAATTTTACTTCT 412460 | | || || |||||||||||| |||||||| || ||| |||| || ||||| Sbjct 2219 TAATTAGAACTCGTGTTTTTCCTTCTCTAAAATC-TCT-CAATATTTCTTCT 2170 >seq17 Length=119807 Score = 109 bits (120), Expect = 2e-18 Identities = 136/186 (73%), Gaps = 3/186 (2%) Strand=Plus/Plus Query 96115 TACTTTACTAATGTTTAATGCTGGGCTCCAGTTATTTTTTAAAATATCTAAACAAATTGC 96174 |||| | |||| |||| || || |||||| || |||||||||||| || ||||| || Sbjct 78527 TACTGTTCTAAGAGTTAAAGCAGGACTCCAGGCATCTTTTAAAATATCCAAGCAAATAGC 78586 Query 96175 ACCTGT---AGTACTAATATTTGGATGATAAATAGGAGTTTTAAATATAATTTTAGGAGG 96231 ||||| | || |||||| ||||| |||| || ||||| ||| ||| ||||| Sbjct 78587 TCCTGTTTGACTAGAAATATTCGGATGCCAAATTCTTGTGATAAATTTAACTTTTGGAGG 78646 Query 96232 CTTATATGGATAGTCTTCAGGAAAAGTAATTTCTAATTGGAATACTCCACCCTCATAGGG 96291 | |||||||| |||| || | | |||| || | |||||||| || || ||||| || Sbjct 78647 TTCGTATGGATATTCTTTTGGGACAATAATATCAAGTTGGAATATACCTCCTTCATATGG 78706 Query 96292 TGTTCC 96297 |||||| Sbjct 78707 TGTTCC 78712 >seq51 Length=221446 Score = 100 bits (110), Expect = 1e-15 Identities = 178/257 (69%), Gaps = 2/257 (1%) Strand=Plus/Plus Query 248791 ATTTTCATTGGTCCTATGTTTTATTTGAGACTTAAACATATGGTACTTGATAAAGTTCAT 248850 ||||| |||| ||||| | ||| | | | ||||||||||| ||||||||| | ||| Sbjct 44680 ATTTTTGTTGGCCCTATTTATTACCAAAAATTGAAACATATGGTTCTTGATAAAATGCAT 44739 Query 248851 TCCAGAAGTATGGGTCCTAGACAAGCTATTACTAGACAACCCATGGAAGGACGTTCTAAA 248910 | ||| | | |||||| |||||| |||| |||||||||| |||||| | ||||| Sbjct 44740 GCAAGAGGAAGGGGTCCAAGACAAATCCTTACCAGACAACCCACTGAAGGAAGATCTAAG 44799 Query 248911 GATGGAGGTCTTAAAATTGGAGAGATGGAAAAAGATGCAATGGTTGCTCATGGAATAGGA 248970 |||||||| || |||| || ||||| | |||| | || ||| ||||| | | Sbjct 44800 GATGGAGGCCTACGTCTTGGTGAAATGGAGAGAGATTGTTTAGTAGCTTATGGAGCAAGC 44859 Query 248971 CAATTCTTAAAAGAACGAATGATGGAAAATTCTGA-TATAACCACAATAATGGTTTGTGA 249029 | |||||| ||| || | ||| ||||| || | | | | |||| || ||| | Sbjct 44860 AACCTCTTAATTGAAAGACTTATGTTGAATTCAGACGTTTTCGAAACTAAT-GTATGTAA 44918 Query 249030 TAAATGTGGAACTTTTG 249046 | ||||||| ||||| Sbjct 44919 TCAATGTGGTCTTTTTG 44935 >seq48 Length=721171 Score = 100 bits (110), Expect = 1e-15 Identities = 170/244 (70%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 420714 ATCAATTCCTCTTCTTCCAGCTCGTCCTGCCATTTGAAGAAATTCATCAGTTCGTAAGAA 420773 ||||| |||||||||||||||| || |||||| | |||||| ||| ||| || Sbjct 361236 ATCAAGACCTCTTCTTCCAGCTCTACCGCTCATTTGGATAAATTCCCCAG-AGTTAACAA 361178 Query 420774 TCTTCTACCACAAT-CATCATATTTAGATAATCCAGTAAATACAACAGTTTTTGTAGGCA 420832 | | ||| | | ||||| |||| | | |||||| | ||| ||||||| ||||| Sbjct 361177 TTCTGTACTCCTTTCCATCAAATTTTCTAAGTGAAGTAAAAATAACCGTTTTTGCAGGCA 361118 Query 420833 TATTTACACCAACAGAAAAAGTTTCAGTTGCTAACAAAACTTTAATTAAtttttttGAAT 420892 | || | || | ||||||||| ||||| | || | |||||||| ||| | | Sbjct 361117 TGTTAATTCCCATAGAAAAAGTCTCAGTAGAAAATAGTACTTTAATAAATGACTCCCCAA 361058 Query 420893 AAAGAATTTCAACAATTTCTTTTAAAATAGGAATTATACCAGAATGATGATATGCCACAC 420952 |||||| ||||| ||||| |||| || ||||| || ||| ||||||| | | | || Sbjct 361057 AAAGAAGCTCAACTATTTCCTTTACAACAGGAAGTAAACCTCCATGATGAATTCCGATAC 360998 Query 420953 CTCT 420956 |||| Sbjct 360997 CTCT 360994 >seq18 Length=102505 Score = 87.8 bits (96), Expect = 7e-12 Identities = 166/240 (69%), Gaps = 6/240 (3%) Strand=Plus/Minus Query 420706 CCAAATGTATCAATTCCTCTTCTTCCAGCTCGTCCTGCCATTTGAAGAAATTCATCAGTT 420765 ||||| ||||||||||||||||||||||||| ||||| |||||| | ||||| || Sbjct 76273 CCAAAAGTATCAATTCCTCTTCTTCCAGCTCTTCCTGACATTTGTGTATATTCAGAAGAG 76214 Query 420766 CGTAAGAATCTTCTACCACAATCATCATATTTAGATAAT-CCAGTAAATACAACAGTTTT 420824 | | | ||| | | |||||||||| |||| | ||||||||||| || | | Sbjct 76213 AGAAGTATTCTGTTTTTTCTTCCATCATATTT-TTTAATACTAGTAAATACAATAGATCT 76155 Query 420825 TGTAGGCATATTTACACCAACAGAAAAAGTTTCAGTTGCTAACAAAACTTTAATTAAt-- 420882 | || ||| | || | ||| | || |||||||| || || || || |||||| Sbjct 76154 AGCTGGACAATTAATTCCCATAGATATTGTCTCAGTTGCAAATAATACCTTGATTAATCC 76095 Query 420883 ttttttGAATAAAGAATTTCAACAATTTCTTTTAAAATAGGAATTATACCAGAATGATGA 420942 | | ||||||| || ||| |||||||| | ||| |||| || ||| ||| ||| Sbjct 76094 TCTGGTGAATAA--GATCTCAGTCATTTCTTTGATAATTGGAAGCATTCCACTATGGTGA 76037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975716957108156