Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20meleagridis_20[genbank_20GCA_5F001593445.1_202016- 03-17] 57 sequences; 8,973,200 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq23 542 2e-148 seq39 219 3e-51 seq41 154 1e-31 seq49 111 1e-18 seq14 107 1e-17 seq11 102 6e-16 seq37 96.9 3e-14 seq46 86.0 5e-11 >seq23 Length=109376 Score = 542 bits (600), Expect = 2e-148 Identities = 1072/1571 (68%), Gaps = 34/1571 (2%) Strand=Plus/Plus Query 517162 AGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAAT 517221 ||| || ||| ||| | ||||| | || | || ||||| || || |||||||| Sbjct 98944 AGCATCATTAACCATACGTTCAATATCGTCCTTTGATAATCTACCCTTATCGTTAGTAAT 99003 Query 517222 AGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATT 517281 ||| || || || || || |||||| | |||| ||||| | |||||||| Sbjct 99004 AGTGATCTTGCTGCTCTTACCAGTACTCTTATCAACAGCAGATACATTCAAGATACCATT 99063 Query 517282 GGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCC 517341 ||||| | |||||| |||||||||||||| || || ||||| | || ||||| || || Sbjct 99064 AGCATCGATATCAAAAGTGACTTCAATTTGTGGTACGCCTCTTGGTGCTGGTGGAATACC 99123 Query 517342 TTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAA 517401 || | || || |||| ||| || ||||| ||||| | | || ||||| || | Sbjct 99124 ATCAAGATGGAACTTTCCGAGAAGATGGTTATCCTTAGTCATTGCTCTCTCACCTTCATA 99183 Query 517402 AATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTT 517461 || ||||| || | | || ||||| | ||| || || || ||| | || || Sbjct 99184 AACCTGGATCAAGACACCGCTCTGGTTATCAGCATAGGTAGTGAAGACTTGAGTCTTCTT 99243 Query 517462 ACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAA 517521 || || ||||| || | ||||||| |||||||||| |||||| || |||||||| Sbjct 99244 TGCTGGGATAGTTGTATTACGCTCAATAAGCTTGGTCATAACACCACCAGCAGTTTCTAA 99303 Query 517522 ACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTG 517581 |||||| || | |||| ||||| | | | | || |||| || | ||| Sbjct 99304 ACCAAGTGATAATGGAGCAACATCCAACAATAAGAGATCCTGAACGG---CAGAGGATTG 99360 Query 517582 ACCAACA---AGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATT 517638 || || | ||||| ||||| | |||||||||||| ||||| |||||||| ||||| Sbjct 99361 CTCACCATTTAAGATAGCAGCTTGTACAGCAGCACCATAGGCAACGGCTTCATCTGGATT 99420 Query 517639 AACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT--TGAAAGAAGTTGTCTTA-CCTT 517695 | | || | | | |||||| || ||| |||| |||| || | || | |||| Sbjct 99421 GATTGCTTTGCATGGCTCTTTACCGTT-AAAGAATTCCTGAATCAAA--GCCTGAACCTT 99477 Query 517696 AGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTT 517755 |||||||| | || || ||||| ||||||| ||||| || | ||||||| Sbjct 99478 TGGAATACGTGTAGAACCACCAACCAATACAACATCATGTACAGATCTCTTATCCATACC 99537 Query 517756 TGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAG 517815 | |||| | ||||| ||||| || | | | || | || | || | || || Sbjct 99538 GGCATCCTTGAGTACTTTCTCAACTGGAGCTAAAGTTGCACGGAAGTAATCAGCGCAGAG 99597 Query 517816 TTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATC 517875 |||||||||| |||||||| | | | ||| |||||||| ||||| | | ||||| Sbjct 99598 TTCTTCGAATCTAGCTCTACTGACGGCAACAGAGTAATCAATACCTTCATAGAGTGAATC 99657 Query 517876 AACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGT 517935 | ||||| |||| |||||| ||||| || | | | || ||||| |||||| || Sbjct 99658 TAACTCAATTGTAGCTTGAGTAGAAGATGACAAAGTTCTCTTTGCACGCTCACATTGAGT 99717 Query 517936 CCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGT---TTTATATTTTCTCTT 517992 || ||||||| ||||||| | || | | | ||||| | | ||| |||||||| Sbjct 99718 TCTGAGTCTTCTTAAGGCTCTAGCATTTGTAGTTAAATCCATACCTCTATTCTTTCTCTT 99777 Query 517993 GAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGT 518052 |||||||| ||||| || ||||| | ||||||||||||||||| ||||| | ||| Sbjct 99778 GAAATCTTGCACACAGAATTCAACAAGTCTGTTATCAAAATCTTCACCACCCAAGTGAGT 99837 Query 518053 ATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATC 518112 || || | ||||| | |||| |||| |||||||||| || || | | |||||| Sbjct 99838 ATCACCAGCGGTAGCCTTGACTTCAAAAATACCATCTTCAATAGTTAATAATGATACATC 99897 Query 518113 ATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTC---TTGGTTT-T 518168 | || |||||||| | ||| || || | |||||| ||| | | || ||| | Sbjct 99898 AAAAGTACCACCACCTAAATCGAAGATCAATACATT----TCTCTCACCAGTTCCTTTCT 99953 Query 518169 TATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAA 518228 ||||||||||||| |||| |||||| |||||||| || ||||| ||||||| ||||| | Sbjct 99954 TATCAAGACCATAGGCAATAGCAGCTGCAGTTGGCTCGTTAATGATTCTCATTACATTCA 100013 Query 518229 GACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAG 518288 |||||||||| || ||||| || || ||||| | |||||| || || || || || | Sbjct 100014 AACCAGCAATTGCACCAGCATCCTTTGTTGCTTGACGTTGTGAGTCATTGAAGTAAGCTG 100073 Query 518289 GAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCA 518348 ||||||||| || |||| | | | || | || || | ||| |||| Sbjct 100074 GAACAGTAACTACAGCATTCTTAATTGGGCGGCCCAAGTATGCTTCAGAGATTTCCTTCA 100133 Query 518349 TTTTACTTAAAATCATTGATGAAATTTGTTCTG--GGGAATATTGCTTGGATTCATTTTG 518406 | || ||| | ||| | ||||||| ||| | ||| | | ||| |||| Sbjct 100134 TCTTCTGTAAGACCATAGCAGAAATTTCTTCAGCATGGA--ACTCCTTCTTTTCACCCAA 100191 Query 518407 ATA--TGATACTTCAAAATATGGTTT---ATTACCAACATTAATAACTTTAAATGGCCAG 518461 || | | || | | || |||||| || | | ||| ||||||||||||||| Sbjct 100192 GTAGCTCACAC-TGATGAT-TGGTTTGTCCTTTGGACCCCTAACTACTTTAAATGGCCAG 100249 Query 518462 TATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCA 518521 | ||||||| ||| || ||| |||| ||| | ||||||||| | || || ||| Sbjct 100250 TGAGTCATATCACTTTGTACTGCTTGATCATCAAACTTTCTACCAATAAGACGCTTAGCA 100309 Query 518522 TCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGA 518581 ||||||| ||||| ||| || | ||| |||||| || |||||||| ||||| ||| Sbjct 100310 TCAAAAACTGTATTTTCTGGGTTTCTAGCAACTTGATTCTTCGCTGCATCACCAATAAGA 100369 Query 518582 TGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCA 518641 | || || |||||||||| ||||| ||||| ||||| || |||||||||||||| | | Sbjct 100370 CGCTCAGTTTCTGTAAATGCTACATAAGATGGTGTTGTACGGTTACCTTGATCATTTGGA 100429 Query 518642 ATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCA 518701 | ||| || || || | ||| ||||||||| ||||| | ||||| ||||||||| Sbjct 100430 ACAATATCTACAGTATCGTTTCTCCATACACCAACACATGAGTATGTTGTACCTAAATCA 100489 Query 518702 ATACCAATAGC 518712 ||||||||||| Sbjct 100490 ATACCAATAGC 100500 Score = 102 bits (112), Expect = 6e-16 Identities = 206/303 (68%), Gaps = 17/303 (6%) Strand=Plus/Plus Query 322085 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGC-TAATGTTCTAAATACTCC 322143 ||||||||||| || ||||| || |||| |||| | || | ||| ||| | || Sbjct 99812 TCAAAATCTTCACCACCCAAGTGAGTATCACCAGCGGTAGCCTTGACTTCAAAA-ATACC 99870 Query 322144 ATTTGAGATATTCATTAACGAAACATCTAAAGTCCCAGCTCCTAAGTCATAAACAATTAC 322203 || | ||| | | ||| || ||||| ||||| ||| | ||||| || | | | ||| Sbjct 99871 ATCTTCAATAGTTAATAATGATACATCAAAAGTACCACCACCTAAATCGAAGATCAATAC 99930 Query 322204 GTTAC---CACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGC 322260 || | |||||||| ||| || ||| | ||| || |||| ||| || Sbjct 99931 ATTTCTCTCACCAGTTCCTTTCTTA------TCA------AGACCATAGGCAATAGCAGC 99978 Query 322261 TGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAG 322320 ||||||||| || ||||| ||| | | |||| ||||| |||||| | ||| ||| Sbjct 99979 TGCAGTTGGCTCGTTAATGATTCTCATTACATTCAAACCAGCAATTGCACCAGCATCCTT 100038 Query 322321 AGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTATTAAT 322380 |||||||| | |||| |||||| || || ||||| ||||||| || || || ||||| Sbjct 100039 TGTTGCTTGACGTTGTGAGTCATTGAAGTAAGCTGGAACAGTAACTACAGCATTCTTAAT 100098 Query 322381 AGG 322383 || Sbjct 100099 TGG 100101 >seq39 Length=423162 Score = 219 bits (242), Expect = 3e-51 Identities = 1012/1584 (64%), Gaps = 39/1584 (2%) Strand=Plus/Plus Query 517139 TTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAG 517198 || ||| |||| |||||| | ||| || ||||||| | ||| || | || | ||| Sbjct 341052 TTGTCTTCTTCGGCAAATTGCTCAGCCTCCTTAATCATACGCTCTATGTCCTCCTGTGAG 341111 Query 517199 AATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCG 517258 | ||| || || ||| || || ||||| |||| |||||| ||| ||||| Sbjct 341112 AGTCTACCCTTATCATTTGTGATGGTAATCTTCTCGGATTTACCAGTTCCCTTATCCTTT 341171 Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 ||| | || | | |||||||| | ||| | ||||| || || |||||||| || || Sbjct 341172 GCACTGACTTGTAAAATACCATCAGTATCAATCTCAAAGGTAACCTCAATTTGGGGAACA 341231 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 ||||| |||| |||||||| || | | ||| |||| ||| |||||||| || Sbjct 341232 CCTCTTGGAGCTGGTGGGATTCCAGAAAGTTCGAATTTTCCGAGAAGGTTATTATCCTTG 341291 Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT---TGATTATCTGAA 517435 || | | || |||||||| ||| |||||| | ||||| | || |||||| Sbjct 341292 GTCATTGGACGCTCACCCTCATAAACCTGGATA---AGTACAGCTGGCTGGTTATCTTGG 341348 Query 517436 TAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATT 517494 ||||| | || || |||| | || || |||| |||||||| |||| | || Sbjct 341349 TAAGTACTGAAAAC-CTGGCTCTTCTTTGTTGGAACAACGGTGTTTCTGCCAATGAGTTT 341407 Query 517495 GGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGAC 517554 ||||||| ||||| |||| || | ||| | || | |||||| ||||| | ||| | Sbjct 341408 TGTCATAACTCCACCAACTGTCTCAATACCTAAAGTTAAAGGAGTAACATCCAATAGTAA 341467 Query 517555 AATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACC 517614 | || | |||| | | |||| | || | ||||| | |||||||| Sbjct 341468 CAAATCACTACCGCCTTCACCTG-----CCAATA----TACCAGCTTGTACGGCAGCACC 341518 Query 517615 ATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT- 517673 ||| || || |||||||| || || | | | ||| | | || || | || || | Sbjct 341519 ATAAGCGACGGCTTCATCTGGGTTGATACCTCTGTTTGGCTCCTTTCCGTCAAAGAACTC 341578 Query 517674 -TTGAAAGAAG-TTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTC 517731 |||| | | ||| | ||| || ||||||| || || || || || || || || Sbjct 341579 CTTGATTAAGGCTTGAAT---CTTGGGGATACGAGTAGAACCACCGACCAAAACGATCTC 341635 Query 517732 ATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACC 517791 | |||| || || | | | | |||| | ||| || | ||| || || | Sbjct 341636 GTCTACCTCGGACTTTTTGATTCCAGCATCCTCAAGAACCTTCTTAACTGGCTCGATTGT 341695 Query 517792 CGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATA 517851 | ||| |||||||| | | | || ||||| || ||||| || | || | | | Sbjct 341696 CTTTCTGAACAAGTCAGCATTCAACTCGTCGAACTTGGCTCTGGTCAAGGTTTCGCTCAA 341755 Query 517852 ATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGC 517911 ||| | | || | |||| |||| || | | || ||| | | ||||| || || Sbjct 341756 ATCTACATCCTCCATCAAACCTTCAATCTCGACCTTAACTTGTGGAGCTGAAGAAAGAGC 341815 Query 517912 ACGTTTAGCACGTTCACATGCTGTCCT-TAGTCTTCGTAAGGCTTTTGCTGATTGATTCA 517970 | || | || ||| | || || | || | || |||| | | || || | | Sbjct 341816 TCTCTTCG-AC-TTCTCGACCTCTCTTCTAAGCCTCTGAAGGGCTCTCTTGTCAGACTTA 341873 Query 517971 A-ATCTGTTTTATATTTTCT-CTTGAA-ATCTTCAACACACCATGTTACAAGACGATTAT 518027 | ||| ||| | | ||| ||||| ||||| | | || | || | | | Sbjct 341874 ACATCC-TTTCCTGTCTTCGACTTGATGATCTTGATAAAGTGATCC-ATAACTCTCTGGT 341931 Query 518028 CAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCAT 518087 | ||||| ||||||||||| | |||| || ||||| || | ||||| || | Sbjct 341932 CGAAATCCTCACCTCCCAAGTGGGTATCACCGCTTGTAGCAACGACCTCGAAAACACCGT 341991 Query 518088 CTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT 518147 |||| | ||| |||| |||||| || |||||||||| ||| | | | | || Sbjct 341992 TATCAATGGTCAAGAGAGAAACATCAAAAGTACCACCACCCAAATCGTATACTA--AAAT 342049 Query 518148 TCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCAT 518207 | |||| | ||| ||||| | ||| | |||| || || || ||||| || | Sbjct 342050 GCTCTTCTCAGCCTTC----TTATCCAAACCGAAAGCAATTGCTGCTGCTGTTGGCTCGT 342105 Query 518208 TAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTT 518267 ||||||| | | ||||| | |||||||| || ||||| || || ||||| | | Sbjct 342106 TAATAATACGGATTACATTCAAGCCAGCAATAGCACCAGCATCCTTGGTAGCTTGACGCT 342165 Query 518268 GTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATAT 518327 | | || ||||| || || || |||||||| || |||| ||||||| ||||||| || Sbjct 342166 GAGCGTCATTAAAGTAAGCTGGGACAGTAATTACTGCATGCTTTACTTCCTTACCAAGAT 342225 Query 518328 AAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAAT 518387 |||| || ||| ||||| || ||| | ||| | |||| | |||||| | Sbjct 342226 AAGCCTCAGCGATTTCCTTCATCTTGACTAAGACCATAGCAGAAACCTCTTCTGGAGCTA 342285 Query 518388 ATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAA 518447 ||||||| ||| | | || |||| | || ||||| | | ||||||| Sbjct 342286 ATTGCTTCTTCTCACCCTTAACAGAAACTTGTATGTAAGGTTTCCCATCCCTGTTAATAA 342345 Query 518448 CTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAA 518507 || | ||||| | | || |||| |||||| | || |||||| | |||| Sbjct 342346 TTTCATATGGCAACAAAGTCTTATCCTTTTGAACGGAATCATCCTTAAAACGACGGCCAA 342405 Query 518508 TTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTG 518567 | | || ||| |||| || | ||| | |||||| || | ||||||| ||||||| Sbjct 342406 TAAGTCTCTTTACATCGAACAAAGTCTGAACTGGATTGATAGTGGCTTGATTCTTGGCTG 342465 Query 518568 CATCTCCAATCAGATGTTCTGTC-TCTGTAAATGAAACATATGATGGAGTTGTGCGATTA 518626 || ||||| | || | || || || ||||| ||||||||||| || | |||||| Sbjct 342466 ACTCACCAATTA-ATCTCTCATCATCAGTGAATGATACATATGATGGTGTAATACGATTA 342524 Query 518627 CCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAA 518686 ||||| ||||| | |||||| || ||| ||||||| | | | ||| ||||| | || Sbjct 342525 CCTTGTTCATTTGGAATAATCTCTACTCTACCATTCTTGTAGATACCAACACATGAATAA 342584 Query 518687 GTTGTTCCTAAATCAATACCAATA 518710 || || |||||||| ||||||||| Sbjct 342585 GTAGTACCTAAATCGATACCAATA 342608 >seq41 Length=345200 Score = 154 bits (170), Expect = 1e-31 Identities = 341/495 (69%), Gaps = 31/495 (6%) Strand=Plus/Minus Query 517155 ATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATC--TTCAGAGAATCTTCCGCGATT 517212 |||||| ||||||||| |||||| ||||||||| | | | | ||| | ||| || Sbjct 73610 ATTCTTCAGCTTCTCTGATCATTTTCTCAATTTCAGCACTGCTAAGA--CCTCCA-GAAG 73554 Query 517213 ATTAGTAATAGTAATATTCTTGGATTTGTTT---GTTGATTTATCAGCGGCAGTCACATT 517269 ||| |||||| || | | || ||| ||| ||||| || ||| |||| ||||| Sbjct 73553 ATTG--AATAGTGATCT-CGTG--TTTCTTTCCAGTTGACTTGTCAATGGCACCAACATT 73499 Query 517270 AAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGC 517329 | ||| ||||| ||||| | |||||| ||||||||||||||||| |||||||| | || Sbjct 73498 CATAATTCCATTTGCATCAATATCAAAGGTGACTTCAATTTGAGGAACCCCTCTAGGCGC 73439 Query 517330 AGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCG 517389 || || || || || | |||| ||| || ||||||||| || |||| || Sbjct 73438 TGGAGGAATTCCAATCATTTCAAATTGTCCAAGCAACTTATTATCTGCAGCAAATTCTCT 73379 Query 517390 TTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATAC 517449 ||| || | ||||| || || |||| |||||| ||||||| | ||| | ||||| Sbjct 73378 TTCTCCTTGGAAAACTTTAATTCCAACTTGAGTTTGGTTATCTGCAGCAGTGGAGAATAC 73319 Query 517450 TCTGGAT-TTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTG-GTCATAATACCA 517507 | ||| | |||||| || ||||| || ||||||| ||| | || | || | || || Sbjct 73318 T-TGGCTCTTTTTAGTGGGGATTGTAGTATTTCTATTAATTA-ATCGAGTAAAAACTCCT 73261 Query 517508 CCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT-TTTGAAG 517566 || ||||||| ||| | ||| | || || || || | || | || || |||| Sbjct 73260 CCCAAAGTTTCTATACCTAAAGATAAGGGTGTAACGTCGAGTAACAAAAGATCCTTGA-- 73203 Query 517567 TTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGC 517626 |||| || || ||| || | | ||||| |||||||| || ||||||||| Sbjct 73202 --TTTC-TCCCTT----CAA----AACACCGGCTTGTATAGCAGCTCCCATTGCAACAGC 73154 Query 517627 TTCATCAGGATTAAC 517641 ||| ||||| ||||| Sbjct 73153 TTCGTCAGGGTTAAC 73139 Score = 91.5 bits (100), Expect = 1e-12 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 322244 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 322303 |||||||| || |||||||| ||||| |||||||| ||| | |||| ||| || || Sbjct 72600 CCGTATGCCAGGGCTGCTGCTGTTGGCTCATTAATGATTCTTGTCACATTTAAGCCTGCT 72541 Query 322304 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 322363 || ||| ||| ||||||||| | ||| | |||||||| || |||||||||||| Sbjct 72540 ATAGAGCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAGGCTGGTACAGTA 72481 Query 322364 ATAACTGC 322371 ||||| || Sbjct 72480 ATAACAGC 72473 Score = 89.7 bits (98), Expect = 4e-12 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 518189 GCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCA 518248 || || || ||||| |||||||| ||||| ||||| | || || || || ||| Sbjct 72588 GCTGCTGCTGTTGGCTCATTAATGATTCTTGTCACATTTAAGCCTGCTATAGAGCCAGCA 72529 Query 518249 TCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCA 518308 || ||||| ||||| | || ||||| ||||| || || || ||||||||||| |||| Sbjct 72528 TCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAGGCTGGTACAGTAATAACAGCATGC 72469 Query 518309 GTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTT 518352 |||| | |||||| ||||| || |||| ||||||||| Sbjct 72468 TTTACACTTCTACCAAGATAAGTTTCAGCAGTTTCTTTCATTTT 72425 >seq49 Length=416705 Score = 111 bits (122), Expect = 1e-18 Identities = 135/183 (74%), Gaps = 1/183 (1%) Strand=Plus/Minus Query 870794 AAAATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTA 870853 ||| | ||||| |||| || || ||||| ||||| |||||||||||| | ||||| ||| Sbjct 93593 AAAGTAATTGTGGATTTCTCATCACCAAACATTGCAAAAGAAATGCATGTGGGACACTTA 93534 Query 870854 AGATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTT 870913 ||||| || || ||||| || | || ||||| || | ||| | ||| || || Sbjct 93533 AGATCTACAATCATTGGCGACACAATATGTAGAGTTCTTGAATATTTAGGATTTGAAGTA 93474 Query 870914 TATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTATATT 870973 | | |||||||| || || |||||||| |||||||| |||||| | |||| ||| || Sbjct 93473 TTAAGAATTAATCACGTTGGAGATTGGGGTACTCAATTTGGTATGCTTATTGAATAT-TT 93415 Query 870974 AAA 870976 ||| Sbjct 93414 AAA 93412 >seq14 Length=135702 Score = 107 bits (118), Expect = 1e-17 Identities = 166/236 (70%), Gaps = 12/236 (5%) Strand=Plus/Plus Query 303976 GTAAATGGTGTTGCATCGCCATACACTCCTTTAACTGCACATAGTTTTCCTAATAAACAT 304035 ||||| || ||||||||||| | || ||||| || |||||| |||||| | || |||| Sbjct 76520 GTAAAAGGAGTTGCATCGCCCTCCAATCCTTGAATTGCACACGCTTTTCCAAGTAGACAT 76579 Query 304036 TCAATAAGTTGCCCAATAGTCATACGTTTGGGCATACAATTAGGATTGATAATAATATCG 304095 ||||| | || ||||| |||||||| || ||| || |||||| || ||||| || Sbjct 76580 TCAATTAAATGACCAATTGTCATACGCGAAGGAATAGCATGAGGATTCATGATAATGTCT 76639 Query 304096 GGAATTAATCCAGATTTACTGAATAACATATCTGCTCGATGAGCTTTGTAT------CCA 304149 ||||| | |||| || | ||| |||||| ||| || | ||||| || Sbjct 76640 GGAATAATTCCATCTTGTGTAAATGGCATATC--CTC----AGTTCTGTATGTTATGCCG 76693 Query 304150 ATGGTACCTTTTTGACCTGCTCTTGACGAAAATTTATCACCTACATTGGGAATTCT 304205 || ||||| ||||| || ||| || | ||| ||||| || |||| || ||||| Sbjct 76694 ATTGTACCCTTTTGGCCATGTCTGGATGCAAACTTATCTCCAACATGAGGTATTCT 76749 >seq11 Length=225008 Score = 102 bits (112), Expect = 6e-16 Identities = 329/502 (66%), Gaps = 13/502 (3%) Strand=Plus/Plus Query 636275 TATTATGATTTCATTCACAAAGAACTTATTACTTTTTCTGTGGATGACGTTCT--TAGAT 636332 |||| |||||| ||||| ||||||||| | || || || ||| | || ||||| Sbjct 75084 TATTTTGATTTTATTCATAAAGAACTTGTA--TTATTTAGTAGATATGATACTACTAGAT 75141 Query 636333 CTGTTCCTAATTTAATGGATGGATTTAAACCATCACATCGCAAAGTATTTTATGGTTCTG 636392 || |||| |||||| | ||||| || ||||| ||| | |||||| ||| || | Sbjct 75142 CTATTCCAAATTTATTAGATGGTTTAAAACCTGGACAAAGAAAAGTACTTTTTGCAACCT 75201 Query 636393 TTGAAAAGAATATTTATAAGCAAGAGATTAAAGTATCAGATTTGACTGGTTTTGTCTC-G 636451 || |||| || || |||| || ||||||| || | || |||||| ||| | | Sbjct 75202 TTAAAAAAAAGCTTAATAATGAAC---TTAAAGTTGCACAATTAGCTGGTTATGTTGCTG 75258 Query 636452 AATATGACGAAATATCATCATGGTGATCAATCATTATCATCAACTATTGTCGGAATGGCT 636511 || || | ||||||||||| || ||||||| | || ||||| ||||| Sbjct 75259 AACATAGTGCT-TATCATCATGGAGAATCATCATTACAAAGTACAATTGTTAATATGGCA 75317 Query 636512 CAAAATTATGTGGGAAGTAACAATCTCAATTTGTTAATGCCATTGGGAATGTTTGGATCT 636571 ||||||| ||| |||||||| ||||| ||| | || ||||| || ||||| | Sbjct 75318 CAAAATTTTGTTGGAAGTAATAATCTAAATCTACTAGAGCCATGTGGTCAATTTGGTAGT 75377 Query 636572 AGATTGACCGGAGGTAAAGATTCAGCGAGTCCTAGGTATTTGAACACTAAATTAGATGAT 636631 ||| | || || |||||| || | || | ||| | |||||| || | | Sbjct 75378 AGAAAGGAAGGTGGAAAAGATGCAAGTGCTGCTCGTTATATATTTACTAAACTATCTAAA 75437 Query 636632 TTGGCAAAGAAAATCTTCATTGATTATGATTTTGATATTCTTCAAC--ATCAGTCAGAAG 636689 | | | | | || ||| || |||| | | || || ||| || || || | Sbjct 75438 TGGACTAGATATATTTTCCCAGAGGCTGATGATCCT-TTATT-AACTTATTTGTATGATG 75495 Query 636690 ATAATTGTCGAATTGAACCTGTTTATTATGCTCCTATTATTCCAATGATACTTGTAAATG 636749 || | |||||||||| | ||||| | || || ||||||||||| | ||||||| Sbjct 75496 ATGGACAACAAATTGAACCTTTATATTACGTACCAATAATTCCAATGATTTTGGTAAATG 75555 Query 636750 GAGCTGAAGGAATTGGTACTGG 636771 | |||| ||||||||||| || Sbjct 75556 GTACTGATGGAATTGGTACAGG 75577 >seq37 Length=17717 Score = 96.9 bits (106), Expect = 3e-14 Identities = 120/162 (74%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 396953 TCGAATGGATTATCAACATTGAAT-TTTTTGCGATAACCAAGATCTACAAGTAATCTGTC 397011 ||||| ||||| ||| ||| | |||||| | | ||||| | | |||||||||||| Sbjct 12626 TCGAAAGGATTGGAAACTTTGTAGATTTTTGGAACATCCAAGG-CGAAAAGTAATCTGTC 12684 Query 397012 AGCAACATATTTAATATATTGAGACATTAGTTCAGAATTCATACCAAGAAGTTTACACGG 397071 ||||||| ||| ||||||||| | ||| ||| || |||||||||| ||| | | || Sbjct 12685 AGCAACAAATTCAATATATTGGGCCATAAGTCTCGAGTTCATACCAATAAGATCAACAGG 12744 Query 397072 AAGAGAATCATTAATAAATTCTTCTTCAATTTCAATCGCTTC 397113 |||||||||| || ||| | | ||| | ||||| ||||| Sbjct 12745 AAGAGAATCACAAAGAAAGTTTCTTTCGACTTCAACAGCTTC 12786 >seq46 Length=385502 Score = 86.0 bits (94), Expect = 5e-11 Identities = 105/142 (74%), Gaps = 1/142 (1%) Strand=Plus/Minus Query 668849 TTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCT 668908 |||| |||||||||||| ||| | ||||||||||||| || ||| | || ||| | | Sbjct 334699 TTAA-AGGTAAAGAAGGACGTTTCAGAGGAAATTTGAGTGGTAAAAGAGTTGATTTTAGT 334641 Query 668909 GCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTT 668968 | | | || |||||| || ||||||| ||||||| | ||||||||| || ||| | Sbjct 334640 GGAAGAACTGTTATTTCTCCTGATCCTAATATTGAAGTTGATGAAGTTGTGGTACCTATG 334581 Query 668969 ATTATTGCTAAAAATCTTACTT 668990 || ||||| || || | |||| Sbjct 334580 ATCATTGCAAAGAAATTAACTT 334559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780819571472242