Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20meleagridis_20[genbank_20GCA_5F001593445.1_202016- 03-17] 57 sequences; 8,973,200 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq23 435 4e-117 seq46 201 1e-46 seq39 179 5e-40 seq11 170 2e-37 seq41 98.7 1e-15 seq2 98.7 1e-15 >seq23 Length=109376 Score = 435 bits (482), Expect = 4e-117 Identities = 1105/1661 (67%), Gaps = 36/1661 (2%) Strand=Plus/Plus Query 6510 TCATTTGATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGACCTTTTTCGCGTACTTTT 6569 |||| | ||| |||||| || | | ||||| ||||| | ||| || || | Sbjct 98862 TCATGTTATAGAGGTAGTTCTCCAAAGAGTTCTTAGCCTCAATCTTGAGTCTGTTCTGCT 98921 Query 6570 CATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATA 6629 |||| ||| | || || || || ||||| | ||||| |||||| || || || |||| Sbjct 98922 CATCCTCACCCTTGTATTTCTCAGCATCATTAACCATACGTTCAATATCGTCCTTTGATA 98981 Query 6630 ATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAG 6689 |||| |||||||| || ||||| || ||||| | ||||| | |||||| ||| Sbjct 98982 ATCTACCCTTATCGTTAGTAATAGTGATCTTGCTGCTCTTACCAGTACTCTTATCAACAG 99041 Query 6690 CACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTAC 6749 || ||||||||| |||||||| ||||| | ||| || | || | |||||||||| | Sbjct 99042 CAGATACATTCAAGATACCATTAGCATCGATATCAAAAGTGACTTCAATTTGTGGTACGC 99101 Query 6750 CCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCG 6809 | || ||||| | ||||||||| | || || | || || | | ||||||| | | Sbjct 99102 CTCTTGGTGCTGGTGGAATACCATCAAGATGGAACTTTCCGAGAAGATGGTTATCCTTAG 99161 Query 6810 CCTTCTTACGTTCACCTTCATAGACTTTAATT--GTCACCGCAGGTTGATTATCTTGTGC 6867 | | | ||||||||||| || | || | |||||| || ||||| Sbjct 99162 TCATTGCTCTCTCACCTTCATAAACCTGGATCAAGACACCGCTC--TGGTTATCAGCATA 99219 Query 6868 CGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGT 6927 || | ||||| ||| ||||| | ||| || || ||||| | | ||||| | ||| Sbjct 99220 GGTAGTGAAGACTTGAGTCTTCTTTGCTGGGATAGTTGTATTACGCTCAATAAGCTTGGT 99279 Query 6928 CATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAG 6987 ||||| |||||| |||||| | ||||| || | || | || ||||| | ||| || Sbjct 99280 CATAACACCACCAGCAGTTTCTAAACCAAGTGATAATGGAGCAACATCCAACAATAAGAG 99339 Query 6988 GTCTTGAACAG-ATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGT 7046 || ||||| | | | | || |||| ||||||| || ||||| || | || || | Sbjct 99340 ATCCTGAACGGCAGAGGATTGCT-CACCATTTAAGATAGCAGCTTGTACAGCAGCACCAT 99398 Query 7047 ATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCG 7106 | || || || ||||| || || || | ||| | |||||||||||||| | ||| Sbjct 99399 AGGCAACGGCTTCATCTGGATTGATTGCTTTGCATGGCTCTTTACCGTTAAAGAATTCCT 99458 Query 7107 ATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCA 7166 | || |||| || || || ||||| || ||||| ||||| || | |||| | Sbjct 99459 GAATCAAAGCCTGAACCTTTGGAATACGTGTAGAACCACCAACCAATACAACATCATGTA 99518 Query 7167 CTTTCGAT---TTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATT 7223 | ||| ||||| || | || ||| ||| || || || | | | | Sbjct 99519 CA---GATCTCTTATCCATACCGGCATCCTTGAGTACTTTCTCAACTGGAGCTAAAGTTG 99575 Query 7224 TACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAAT 7283 |||||| | || || ||||| || || | || | | | || | || ||| Sbjct 99576 CACGGAAGTAATCAGCGCAGAGTTCTTCGAATCTAGCTCTACTGACGGCAACAGAGTAAT 99635 Query 7284 CAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTC 7343 ||| || || || | ||||| | ||||| || | ||| | | || || || |||| Sbjct 99636 CAATACCTTCATAGAGTGAATCTAACTCAATTGTAGCTTGAGTAGAAGATGACAAAGTTC 99695 Query 7344 GCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATAT 7403 |||||| |||||||| |||| | | | | ||| | | || | | || Sbjct 99696 TCTTTGCACGCTCACATTGAGTTCTGAGTCTTCTTAAGGCTCTAGCATTTGTAGTTAAAT 99755 Query 7404 CTTT--CT-TATGTTTACGTTTAAACTCTT---CAGAGAAGTGTCGAAGGAGTCTCGAAT 7457 | | || ||| || | || || |||| || |||| | || ||||| || Sbjct 99756 CCATACCTCTATTCTTTCTCTTGAAATCTTGCACACAGAATTC---AACAAGTCTGTTAT 99812 Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517 | |||||||||||||||||||| ||||| || ||||| || ||||||||||| ||||| Sbjct 99813 CAAAATCTTCACCACCCAAGTGAGTATCACCAGCGGTAGCCTTGACTTCAAAAATACCAT 99872 Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577 ||||||| |||| || || |||||||| ||||||||||| | || || || | ||| | Sbjct 99873 CTTCAATAGTTAATAATGATACATCAAAAGTACCACCACCTAAATCGAAGATCAATACAT 99932 Query 7578 TCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637 | | || | | |||||||| ||||| || || ||||| || || ||||| || | Sbjct 99933 TTCTCTCACCAGTTCCTTTCTTATCAAGACCATAGGCAATAGCAGCTGCAGTTGGCTCGT 99992 Query 7638 TAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 |||| || | | ||| |||| |||||||| | | ||||| || || ||||| ||| Sbjct 99993 TAATGATTCTCATTACA-TTCAAACCAGCAATTGCACCAGCATCCTTTGTTGCTTGACGT 100051 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || || || || ||||| || || || || || || || | | | | | || | Sbjct 100052 TGTGAGTCATTGAAGTAAGCTGGAACAGTAACTACAGCATTCTTAATTGGGCGGCCCAAG 100111 Query 7757 TACGATTCCGCGATATCTTTCATTTTG-GTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 || | ||| | ||| || ||||| || |||||| |||| | ||||| |||||||| Sbjct 100112 TATGCTTCAGAGATTTCCTTCATCTTCTGTAAGA-CCATAGCAGAAATTTCTTCAGCATG 100170 Query 7816 AAACTGTTTCGTTTCACC---GTTAAAATCA-ACTTCAATCATGGGTTTATCCGCAGCAC 7871 |||| ||| ||||||| || | ||| ||| || || ||||| ||| | || Sbjct 100171 GAACTCCTTCTTTTCACCCAAGT--AGCTCACACTG--ATGATTGGTTTGTCCTTTGGAC 100226 Query 7872 CGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACT 7931 | | || ||| | | ||| | ||||||| ||| || ||| || ||||| Sbjct 100227 CCCTAACTACTTTAAATGGCCAGTGAGTCATATCACTTTGTACTGCTTGATCATCAAACT 100286 Query 7932 TTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGT 7991 |||| || ||||||||||| |||||||||||||| |||| ||||| | || ||| | Sbjct 100287 TTCTACCAATAAGACGCTTAGCATCAAAAACTGTATTTTCTGGGTTTCTAGCAACTTGAT 100346 Query 7992 TCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGG 8051 ||||||| || || || |||||||| || | |||| ||||| || || || ||||| | Sbjct 100347 TCTTCGCTGCATCACCAATAAGACGCTC---AGTTTCTGTAAATGCTACATAAGATGGTG 100403 Query 8052 TCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGA 8111 | || || || ||||| || || | || ||| ||||| |||||| ||| || || | Sbjct 100404 TTGTACGGTTACCTTGATCATTTGGAACAATATCTACAGTATCGTTTCTCCATACACCAA 100463 Query 8112 CGCACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGA 8152 | || || || ||||| |||||||||||||| || ||| || Sbjct 100464 CACATGAGTATGTTGTACCTAAATCAATACCAATAGCTGGA 100504 >seq46 Length=385502 Score = 201 bits (222), Expect = 1e-46 Identities = 1155/1827 (63%), Gaps = 53/1827 (3%) Strand=Plus/Minus Query 104368 TAATACATACCCGTTTTTAAACCAGTTTTCCACGCGTACATGTGCATAGACGAAAGTTTT 104427 ||||| || || ||||||||||| ||||||| | || | |||||||| || | ||| Sbjct 13938 TAATAAATGCCTGTTTTTAAACCTTTTTTCCAACCATAAAAATGCATAGATGATAACTTT 13879 Query 104428 G--AAATTGTTGGACTCTCGACGAATAAGTTCATACTTTGACTTTGGTCTATATACACAC 104485 | |||||| | | | || | | ||||| | ||| ||| | ||| || Sbjct 13878 GCAAAATTG--GCATTTTCCATATGGATGTTCAAAGATTGTGATTGACAAACATATGGAC 13821 Query 104486 CTCTATCCGCCGCCATATCGATGATTGTTTTTTGACTCATTTCCCATACGGTTTTATACA 104545 | ||||| || |||||||| || | ||| ||||| | |||||||| || || ||||| | Sbjct 13820 CCCTATCTGCAGCCATATCAATTACTGTCTTTTGCTTAATTTCCCAAACAGTCTTATAAA 13761 Query 104546 ATTCCTTAAGATCATCGGGTATATCAATAATGTTTTGAACAGACCCATTTGCCTTCACCA 104605 || | ||| || || || || || ||||||| | ||||| || | | Sbjct 13760 GCTCACGTATATCCTCCGGGATTGTAAGTATATTTTGAATACTGCCATTA---TTTGCAA 13704 Query 104606 TAAGAT-CT--TTCA--TTTCCTTCGACCAGAGTCCACGTTCTTTCAAATCGTTTACTAA 104660 | | || || || | || | || ||| | ||| ||||| ||||| |||| ||| Sbjct 13703 TGATATTCTGCTTAAGCTTATCATC--CCATAACCCAAGTTCTAGTAAATCATTTAGTAA 13646 Query 104661 ATGTTTGTTTACGACGACAAATTCACCCGCGAGTGTTCGTCTCAAATAGATATTGGTCGT 104720 ||| ||||| || | || ||||| | ||| | | ||| || || | || Sbjct 13645 ATGCGGATTTACTACAAAGAACTCACCAGATAGTACCCTACGGTGATAAATGTTTGAAGT 13586 Query 104721 ATACGGTTCGAAACACTCGTTGTTCCCTAAAATCTGGGATGTGGATGCGGTAGGCATAGG 104780 | || || |||| ||||||||| |||||||| || || ||||| || || ||||| || Sbjct 13585 GAATGGCTCAAAACTCTCGTTGTTACCTAAAATTTGTGAAGTGGAGGCTGTTGGCATTGG 13526 Query 104781 TGCAAGAAGAAGACTATTCATAGTTCCTTTCTTAACAAGTTTACGCATG---GCATTCCA 104837 | | | | | ||| | | || | || || | || | | || ||| Sbjct 13525 AGATATTAATAAAGAATTACGAATACCATATTTGGAAATTCTATCTTTAAGTGAATCCCA 13466 Query 104838 ATCGTATCGACCACTAAACTTTGGGT--CTCGATCCCACATATCGAATTGAAGAATACCT 104895 ||| | | || | | | | || ||| |||||||||| ||||| | ||||||| Sbjct 13465 ATCACAAAGCCC--TGAGTCTGGCGTAACTC---CCCACATATCAAATTGTAAAATACCT 13411 Query 104896 TTACTAAACGGTGACCCCTTAAACGTTTCATAAGGACCGTACATTTCGGCAAGTTCACAC 104955 ||||| || || || | | | ||||| || || || || |||| ||||| ||||| Sbjct 13410 TTACTTGCAGGAGAACCATAATATGTTTCGTATGGTCCATATTTTTCCGCAAGCTCACAG 13351 Query 104956 GACGATTCGAGTGATGCGTGGTAGATAGTTTCGAATATATCAATGTTGAGTTTTCTCGAT 105015 | || || | ||| | ||||| || || || | | || | ||| | | | Sbjct 13350 CTAGCGTCAAGAGCTGCATAATAGATGACCTCAAAGATTTGTTTATTCAATTTCTTAGCT 13291 Query 105016 TCTTCTGAACCGAATGTCATTCTTAACATGATAAACACGTCAGCGAGACCCTGAACACCA 105075 | || || || ||| | | | ||| ||||| |||||||||||| |||| ||| Sbjct 13290 CCCTCCGACTCGTATGGTAAACGAAGCATCATAAAACAGTCAGCGAGACCTTGAATGCCA 13231 Query 105076 ATACCGATGGGTCTGTGACGCATATTTGAACGTTTCCCGTTTTCGGTTGGGTAAAAGTTT 105135 || || | || | || | | ||| || ||| | | || | | || | | | Sbjct 13230 ATCCCCAATGGACGATGCCTTAAATTCGATTTTTTACATTCTT---TAAGAGAATAATAT 13174 Query 105136 TTA---TCAATAACCTTGTTTAAGTTACGTGTAACCATTTTCGTAACACGATGTAACTCT 105192 | ||||| | || || || || | ||||| || || ||||| | ||||| Sbjct 13173 CCAACGTCAATTATTTTATTCAAATTCCTTGTAATCACCTTTGTAACTTCTTTTAACTTA 13114 Query 105193 TCATGGTTAAAC---TCGTTCTTCTCGACATCAACGTATTTTGGTAACGCGATTGATGCG 105249 ||| | |||| | ||| || | | || ||| | ||||| | | || || || Sbjct 13113 TCAAAATCAAACGTCTTGTTATTTTTGTCAACAA---ACTTTGGAAGGCCAATAGACGCC 13057 Query 105250 AGATTACATACGGCGGTTTCTTCCTTATCCGTAAACTCCAGAATTTCTGTACACAAATTT 105309 |||||||| ||||| ||| ||| | || |||||| ||||| || || || || Sbjct 13056 AGATTACAAACGGCAACTTCGTCCGCACTAGTGTACTCCATGATTTCAGTGCATAAGTTA 12997 Query 105310 GATGATTTAATCGTACCAACGTGTTTATGGTTCGACTTTTC--ATTACACGCGTCTTTGT 105367 ||| ||| ||||| | | ||| || || |||||| ||| || ||||| | Sbjct 12996 CTTGAGACAATAGTACCCAAATTTTTCTGATT--ACTTTTACTATTTGCAGCATCTTTAT 12939 Query 105368 AAAGCATATATGGGGTTCCCGTTTCACTTTGGGATTTAATAATTGCTTTCCAAATCTCCG 105427 || ||| |||| |||||||| ||| |||| | | | ||| ||||| | | Sbjct 12938 AACAAATAAATGGTGTTCCCGTCTCAATTTGAGCCTGCAAGATTAAGAACCAAAGTTTCT 12879 Query 105428 AAGCTGGTACAAC--TTTAGTTGCGATACCTTCAGATTCGTATTTCTCGTAAAGATCTTC 105485 ||| | || | ||| || | |||| || || | || || || | | Sbjct 12878 GCGCT--TTCATCGTTTTCCTTCCACGGCCTTGTTTCTCATACTCTTCATATAGCTTCTT 12821 Query 105486 AAACTCTTTACCGTACACGTCT-GAAAGACCCTTTGCCTG-ATCAGGACAAAACAATGAC 105543 ||| || | ||| | || ||| | || |||| || | ||| || || | | | | Sbjct 12820 AAAGTCATCACCCCAAACATCTTGCAATCCCCT--GCATTCATCCGGGCACATTAGAGTC 12763 Query 105544 CAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAAG 105603 |||| ||| |||||| | | |||||||| ||| |||| ||| | ||| | |||| Sbjct 12762 CAATCTTGATCCTTTTCAACTCTCTCCATGAACAGATCAGGAACCCAGAGGGCAGGAAAG 12703 Query 105604 AGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGA 105663 || || ||||| ||| |||||| | || ||||| | |||||| | ||| || | | Sbjct 12702 AGATCGCGACATCTCATCTCTTCCTTCCCGTGATTTTTCCTAATTTCAATAAACTCTACA 12643 Query 105664 ATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCTTTACGACGCCCCGC---T 105720 | ||| ||||||| ||||| ||||| | |||||| | |||||||| ||| | | Sbjct 12642 ACATCAACGTGCCACGGTTCCAAATAAATTGCAATGGCACCTTTACGCTTCCCTCCACCT 12583 Query 105721 TGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGAT 105780 |||| | ||| || || || ||||| || || ||||| ||||| | || | ||| Sbjct 12582 TGATCAATATACCTAGCAGTGTCATTATAAACACGCAACATCGGAATTAATCCGTTGGAC 12523 Query 105781 GTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAAC-CC 105839 |||||||||| || ||||||| ||| | || | | | || || || || || Sbjct 12522 CTTCCATTTGTCCCTCGAATATATGAACCAGTTCCTCTAATATTACTCAC-TGCCACTCC 12464 Query 105840 AATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTC 105899 || || || || |||||| || || || | ||| ||| || ||||||||| Sbjct 12463 AAGGCCACCTGCAGTCTTACTAATGTTTGCGCATTTAGTTAATGTGTCAAAAATACCGTT 12404 Query 105900 GATACTATCTTCCTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTGGGTGTACC 105959 || |||||| | || | | ||||| ||||||||||| |||| || || || Sbjct 12403 TATTGAATCTTCTGGAATCCTGAGTAAAAAACAAGATGACATTTGAGGTCGTGGCGTGCC 12344 Query 105960 AGCATTGAACAGAGTTGGTGTTGCATGAATGAACAAACCTTTCGATAACGCTTCGTATGT 106019 | ||| || || || |||||||||||| | || | || ||||||| |||||||| Sbjct 12343 TGAATTAAAGAGTGTGGGTGTTGCATGAGTAAAATATTTTTGCGATAACAACTCGTATGT 12284 Query 106020 TTCCAGGACGTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCATATAGAGATA 106079 || || | |||||||| | ||||| ||| || || ||||| |||| Sbjct 12283 CTCAAGTGCAGCTTCAATATCACCACAGTGAATCCCACAAGAAACCCGCATCAGAAGATG 12224 Query 106080 TTGGGGTGTTTCAATAATTTCACCGTCAATTTTCTGGAGATACCCTTTTTCAAGTGTTTT 106139 || ||| |||| | || || ||||||||| | ||||| | |||| || ||||| Sbjct 12223 CTGTGGTCTTTCCACAACTTTGTTGTCAATTTTAAGAAGATAGGATCTTTCCAGGGTTTT 12164 Query 106140 TAAACCAAAATACCCAAACTCAAAATC 106166 || ||||||| || | |||||||| Sbjct 12163 GAAGGCAAAATAATCATATTCAAAATC 12137 >seq39 Length=423162 Score = 179 bits (198), Expect = 5e-40 Identities = 458/691 (66%), Gaps = 16/691 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| ||||| |||||||| ||||| || || || ||| || || | ||| Sbjct 341931 TCGAAATCCTCACCTCCCAAGTGGGTATCACCGCTTGTAGCAACGACCTCGAAAACACCG 341990 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 |||||| | || | ||||||||||| ||||||||||||| || | | | | | Sbjct 341991 TTATCAATGGTCAAGAGAGAAACATCAAAAGTACCACCACCCAAATCGTATACTAAAATG 342050 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || | || | | ||||||| | |||| | || || || || || ||||| || Sbjct 342051 CTCTTCTCAGCCT------TCTTATCCAAACCGAAAGCAATTGCTGCTGCTGTTGGCTCG 342104 Query 7637 TTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 |||||||||| || ||| |||| ||||||||||| | ||||| || || ||||| || Sbjct 342105 TTAATAATACGGATTACA-TTCAAGCCAGCAATAGCACCAGCATCCTTGGTAGCTTGACG 342163 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || | || |||||||| || ||||| || | || || | | | |||| |||||| || Sbjct 342164 CTGAGCGTCATTAAAGTAAGCTGGGACAGTAATTACTGCATGCTTTACTTCCTTACCAAG 342223 Query 7756 ATACGATTCCGCGATATCTTTCATTTTG-GTAAGAACCATCGATGAAATCTCTTCAGCCG 7814 ||| | || ||||| || ||||| ||| |||| ||||| | |||| |||||| | | Sbjct 342224 ATAAGCCTCAGCGATTTCCTTCATCTTGACTAAG-ACCATAGCAGAAACCTCTTCTGGAG 342282 Query 7815 CAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGG 7874 | || || ||| | ||||| |||| | ||||| || ||||| | || | | | Sbjct 342283 CTAATTGCTTCTTCTCACCCTTAACAGAAACTTGTATGTAAGGTTT---CCCATCCCTGT 342339 Query 7875 GGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTC 7934 |||| | ||| | | | || |||| | ||| || | ||| ||| | Sbjct 342340 TAATAATTTCATATGGCAACAAAGTCTTATCCTTTTGAACGGAATCATCCTTAAAACGAC 342399 Query 7935 TTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCT 7994 || ||||| | |||| |||| || | || | || || || | | ||| |||| Sbjct 342400 GGCCAATAAGTCTCTTTACATCGAACAAAGTCTGAACTGGATTGATAGTGGCTTGATTCT 342459 Query 7995 TCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCG 8054 | || | || || || | | |||| | || || || | || || ||||| || Sbjct 342460 TGGCTGACTCACCAATTAATCTCTCATCA---TCAGTGAATGATACATATGATGGTGTAA 342516 Query 8055 TTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGC 8114 | ||||| ||||| || || | |||||| ||||| | | || | ||| || || | Sbjct 342517 TACGATTACCTTGTTCATTTGGAATAATCTCTACTCTACCATTCTTGTAGATACCAACAC 342576 Query 8115 ACGAATACGTTGTTCCTAAATCAATACCGAT 8145 | ||||| || || |||||||| ||||| || Sbjct 342577 ATGAATAAGTAGTACCTAAATCGATACCAAT 342607 Score = 127 bits (140), Expect = 3e-24 Identities = 360/551 (65%), Gaps = 9/551 (2%) Strand=Plus/Plus Query 6611 TCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTA 6670 || ||||| || | || | ||| ||||||||||| || || |||||||| ||||||||| Sbjct 341094 TCTATGTCCTCCTGTGAGAGTCTACCCTTATCATTTGTGATGGTAATCTTCTCGGATTTA 341153 Query 6671 CCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTT 6730 || | ||||||| | ||||| || | |||||||||| | ||||| || || | Sbjct 341154 CCAGTTCCCTTATCCTTTGCACTGACTTGTAAAATACCATCAGTATCAATCTCAAAGGTA 341213 Query 6731 ACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCA 6790 || | |||||| || ||| || || || | ||| || || | | || ||| | || Sbjct 341214 ACCTCAATTTGGGGAACACCTCTTGGAGCTGGTGGGATTCCAGAAAGTTCGAATTTTCCG 341273 Query 6791 AGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCA 6850 || | | |||||| | | | | ||| ||||| ||||| || | || || || Sbjct 341274 AGAAGGTTATTATCCTTGGTCATTGGACGCTCACCCTCATAAACCTGGATAAGTACAGCT 341333 Query 6851 GGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTT 6910 || || |||||||| || ||| | || ||||| | ||||| || ||| Sbjct 341334 GGCTGGTTATCTTGGTAAGTACTGAAAACCTGGCTCTTCTTTGTTGGAACAACGGTGTTT 341393 Query 6911 CTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTC 6970 || ||| | ||||||| ||||| | || || | || | || | ||| || Sbjct 341394 CTGCCAATGAGTTTTGTCATAACTCCACCAACTGTCTCAATACCTAAAGTTAAAGGAGTA 341453 Query 6971 ACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCT 7030 || ||||| ||||||| || || | | |||||||| | || || | ||| Sbjct 341454 ACATCCAATAGTAACAAATC----AC---TAC--CGCCTTCACCTGCCAATATACCAGCT 341504 Query 7031 TGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTA 7090 || || | || || || ||||| || ||||| ||||| || | | || | || || Sbjct 341505 TGTACGGCAGCACCATAAGCGACGGCTTCATCTGGGTTGATACCTCTGTTTGGCTCCTTT 341564 Query 7091 CCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACC 7150 |||| ||| | ||| | | |||||| || ||||| || || || ||||||||| Sbjct 341565 CCGTCAAAGAACTCCTTGATTAAGGCTTGAATCTTGGGGATACGAGTAGAACCACCGACC 341624 Query 7151 AAAACGATTTC 7161 |||||||| || Sbjct 341625 AAAACGATCTC 341635 >seq11 Length=225008 Score = 170 bits (188), Expect = 2e-37 Identities = 342/502 (68%), Gaps = 15/502 (3%) Strand=Plus/Minus Query 183161 CCGGTACCAATACCTTCAGTTCCATTTACCAAAACGGTCGGTAATATAGGAACATAATAG 183220 || |||||||| || ||||| ||||||||||||| | || | ||| || || ||||| Sbjct 75577 CCTGTACCAATTCCATCAGTACCATTTACCAAAATCATTGGAATTATTGGTACGTAATAT 75518 Query 183221 TCAGGTTCGATTTGTTTACCGTCGTCGTCGAGATAGTTTAATACTGGATCATC----TTT 183276 |||||| ||||||| || || || | | ||| |||||| |||||||| | | Sbjct 75517 AAAGGTTCAATTTGTTGTCCATCATCATACAAATAAGTTAATAAAGGATCATCAGCCTCT 75458 Query 183277 GGGATCAAAAAGTATTCTCGCGTTTTTAGTCAATTTTGTAAATATATACCTGGTTTGACT 183336 |||| ||| ||| || | ||||| | ||| ||||||||||| | | ||| Sbjct 75457 GGGA---AAATATAT-CTAGTCCATTTAGATAGTTTAGTAAATATATAACGAGCAGCACT 75402 Query 183337 CGCGTCTTTACCACC---CATGAGACGTGTACCAAATTGACCACATGGTTCGAGTAAATT 183393 || ||||| ||||| | | || ||||||||||||||||||| || |||| ||| Sbjct 75401 TGCATCTTTTCCACCTTCCTTTCTAC---TACCAAATTGACCACATGGCTCTAGTAGATT 75345 Query 183394 AATATTATTCGACCCCGTAAAATTATGTGCTAATTTTACAATTGTATCTGCCAAAGAGAC 183453 | |||||| || |||||| ||||| | || ||||||||| | || || Sbjct 75344 TAGATTATTACTTCCAACAAAATTTTGTGCCATATTAACAATTGTACTTTGTAATGATGA 75285 Query 183454 TTCACCGTGGTGATACGATGTTTTTTCCGAAACGTATGCGGCTAATTGCGCAACCTTCAT 183513 ||| || || ||||| | | | ||| | ||| || | |||||||| ||||| || | Sbjct 75284 TTCTCCATGATGATAAGCACTATGTTCAGCAACATAACCAGCTAATTGTGCAACTTTAAG 75225 Query 183514 TTCAGATGTAAGATTCTTTGTGAAACACGCGTATAACACTTTTCGTTGGGATGGTTTTAA 183573 |||| |||| || ||| | || || | | ||||||| ||| |||||||| Sbjct 75224 TTCATTATTAAGCTTTTTTTTAAAGGTTGCAAAAAGTACTTTTCTTTGTCCAGGTTTTAA 75165 Query 183574 ACCATCTGAAACGTGTGCAATCGACCTTTTCAAATCAGCAAGACTGAAATTTACAAGATC 183633 ||||||| | | | || ||| || || | |||| ||| || |||||| || Sbjct 75164 ACCATCTAATAAATTTGGAATAGATCTAGTAGTATCATATCTACTAAATAATACAAGTTC 75105 Query 183634 TTTATGAATAAAATCAGAAATA 183655 |||||||||||||||| ||||| Sbjct 75104 TTTATGAATAAAATCA-AAATA 75084 >seq41 Length=345200 Score = 98.7 bits (108), Expect = 1e-15 Identities = 222/328 (68%), Gaps = 8/328 (2%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| || ||||| || || | | |||| || ||| ||||| |||||||| | || Sbjct 72745 ATCAAAGTCTTCTCCTCCTAGGGAAGTATTTCCATTGGTTGCTTTAACTTCAAACACTCC 72686 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 || ||| | ||| | |||| |||||| ||||| || |||| |||| ||| | | Sbjct 72685 ACCAAGAATCTCTAAGATAGAAATATCAAAGGTACCTCCTCCCAAGTCATAAAC---TGC 72629 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | | || | | | ||| | | || || | ||||| || | || || || ||||| || Sbjct 72628 GATTGTTTTGCCATCT--GCTTTT-TCCATTCCGTATGCCAGGGCTGCTGCTGTTGGCTC 72572 Query 7636 ATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 |||||| || | ||| || || || || |||| | ||||| || || ||||| | Sbjct 72571 ATTAATGATTCTTGTCACATTTAAG-CCTGCTATAGAGCCAGCATCCTTAGTTGCTTGAC 72513 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 | || ||||| ||||||||||| || || || | || || | | | || | |||| | Sbjct 72512 GCTGAGAATCATTAAAGTAGGCTGGTACAGTAATAACAGCATGCTTTACACTTCTACCAA 72453 Query 7755 GATACGATTCCGCGATATCTTTCATTTT 7782 |||| | ||| || | ||||||||||| Sbjct 72452 GATAAGTTTCAGCAGTTTCTTTCATTTT 72425 Score = 89.7 bits (98), Expect = 7e-13 Identities = 206/303 (68%), Gaps = 13/303 (4%) Strand=Plus/Minus Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 |||| ||||||| ||| ||||||||||||| ||| || | || | |||||| | | | Sbjct 73509 GCACCAACATTCATAATTCCATTTGCATCAATATCAAAGGTGACTTCAATTTGAG--GAA 73452 Query 6749 CCCCTC--GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCG 6806 |||||| || || | ||||| || | | |||||| ||||| || | ||||| | Sbjct 73451 CCCCTCTAGGCGCTGGAGGAATTCCAATCATTTCAAATTGTCCAAGCAACTTATTATCTG 73392 Query 6807 TCGC--CTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTG 6864 || |||| | ||| |||| | ||||||||| || || ||| |||||| Sbjct 73391 CAGCAAATTCT--CTTTCTCCTTGGAAAACTTTAATTCCAACTTGAGTTTGGTTATCTGC 73334 Query 6865 TGCCGTTGAGAAGA-TTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCG 6923 || || ||||| | || | ||||| |||| || || || |||||||| ||| | Sbjct 73333 AGCAGTGGAGAATACTTGGCTCTTT-TTAGTGGGGATTGTAGTATTTCTATTAATTAATC 73275 Query 6924 GGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTA 6983 | || | || || |||| |||||| | || | ||| | ||||| ||||| ||||| Sbjct 73274 GAGTAAAAACTCCTCCCAAAGTTTCTATACCTAAAGATAAGGGTGTAACGTC---GAGTA 73218 Query 6984 ACA 6986 ||| Sbjct 73217 ACA 73215 >seq2 Length=732862 Score = 98.7 bits (108), Expect = 1e-15 Identities = 168/240 (70%), Gaps = 8/240 (3%) Strand=Plus/Plus Query 11446 TTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACG--GTTGATTTTCACGTG 11503 ||| | |||| ||||||||||||||| ||||| | ||||| | | | ||||| | || Sbjct 608102 TTCCTTCCAACCGCATCAATTTCATCAATAAAAACAATACTTGGAGATAATTTT--CTTG 608159 Query 11504 CCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACG 11563 | | ||||| || | ||||| |||| || | || ||||| || |||| || Sbjct 608160 CTTGTGAAAATAATTCTCTTACTCTACTTGCACCCATTCCAACAAAAATCTCAATAAA-- 608217 Query 11564 ATGAC--CCCGAACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAA 11621 || || || || | || ||| || || || |||||| || | ||| |||||| Sbjct 608218 ATCACTTCCAGATATATAAAAAAATGGTACATTAGCTTCACCAGCAACAGCCTTTGCTAA 608277 Query 11622 AAGTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCACC 11681 | ||||||||| ||||||||| ||| |||||| |||||| ||||||| || ||||| Sbjct 608278 TAATGTTTTACCGGTACCTGGTGGTCCTACTAATAAAGCACCCTTTGGTATCTTTGCACC 608337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132347467880