Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20meleagridis_20[genbank_20GCA_5F001593445.1_202016- 03-17] 57 sequences; 8,973,200 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq23 336 1e-86 seq39 244 7e-59 seq12 187 2e-41 seq41 150 1e-30 seq49 147 1e-29 seq11 141 6e-28 seq6 134 9e-26 seq14 127 1e-23 seq45 123 2e-22 seq46 105 4e-17 >seq23 Length=109376 Score = 336 bits (372), Expect = 1e-86 Identities = 664/972 (68%), Gaps = 23/972 (2%) Strand=Plus/Minus Query 475310 GGAACTCATGACGTAACTTTACTATCACTCGAAGATGGTCTTTTCTCTGTAAGAGCAACA 475369 || ||| ||| ||| | ||| || | | ||||||||| |||| || | || || Sbjct 99906 GGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTCAAGGCTACC 99847 Query 475370 GCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGGTGTGTT 475429 ||||| ||| | || | |||||||||||||||||||| |||||||| || ||||| Sbjct 99846 GCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAACAGACTTGTTGAATTCTGTGTG 99787 Query 475430 GAAGATTTCAAGAGGAAAAATAAAGTT---GATCTTTCAACATCTGCTAAAGCATTAAGA 475486 ||||||||||||| || |||| || | ||| | | ||| ||||| ||| |||||| Sbjct 99786 CAAGATTTCAAGAGAAAGAATAGAGGTATGGATTTAACTACAAATGCTAGAGCCTTAAGA 99727 Query 475487 CGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACT 475546 | || |||||| ||||| ||||| ||| || || | || ||| |||||||| |||| Sbjct 99726 AGACTCAGAACTCAATGTGAGCGTGCAAAGAGAACTTTGTCATCTTCTACTCAAGCTACA 99667 Query 475547 GTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAA 475606 |||| | ||||| || | |||||| |||||||| | | | | || |||| | Sbjct 99666 ATTGAGTTAGATTCACTCTATGAAGGTATTGATTACTCTGTTGCCGTCAGTAGAGCTAGA 99607 Query 475607 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTC 475666 || ||||| | || ||||| ||| | ||| | | || ||||| |||| ||| Sbjct 99606 TTCGAAGAACTCTGCGCTGATTACTTCCGTGCAACTTTAGCTCCAGTTGAGAAAGTACTC 99547 Query 475667 AGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACA 475726 | ||| | | || || | || ||||| |||| | || || ||||| ||| Sbjct 99546 AAGGATGCCGGTATGGATAAGAGATCTGTACATGATGTTGTATTGGTTGGTGGTTCTACA 99487 Query 475727 AGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATG-A 475785 | |||||||| | | || || || ||||| |||||| || | || | Sbjct 99486 CGTATTCCAAAGGTTCAGGCTTTGATTCAGGAATTCTTTAACGGTAAAGAGCCA--TGCA 99429 Query 475786 AAGTG-TAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTAT 475844 ||| | ||||| |||||||| ||||| ||||| |||||||| ||||| ||||| ||| Sbjct 99428 AAGCAATCAATCCAGATGAAGCCGTTGCCTATGGTGCTGCTGTACAAGCTGCTATCTTAA 99369 Query 475845 CAGGT---CAATCA---GACGAGAAACTAAATAATATTGTACTTGTTG-ACGTAACTCCA 475897 ||| ||||| | || | | || | || |||||| | || ||||| Sbjct 99368 ATGGTGAGCAATCCTCTGCCG------TTCAGGATCTCTTA-TTGTTGGATGTTGCTCCA 99316 Query 475898 CTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACT 475957 | ||| | ||| | ||||| | ||| || ||||||| || |||||||| | ||||| Sbjct 99315 TTATCACTTGGTTTAGAAACTGCTGGTGGTGTTATGACCAAGCTTATTGAGCGTAATACA 99256 Query 475958 CCTATCCCATGCAAAAAAT-CAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGT 476016 |||||||| ||||| || | |||| || | || ||| ||||||| || | ||| Sbjct 99255 ACTATCCCA-GCAAAGAAGACTCAAGTCTTCACTACCTATGCTGATAACCAGAGCGGTGT 99197 Query 476017 AACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAAC 476076 ||||| | | ||||||||| ||| | | ||||| ||||| | || |||| Sbjct 99196 CTTGATCCAGGTTTATGAAGGTGAGAGAGCAATGACTAAGGATAACCATCTTCTCGGAAA 99137 Query 476077 TTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTT 476136 || ||||||| |||||||| || || || ||||| || || ||||||||||| ||||| Sbjct 99136 GTTCCATCTTGATGGTATTCCACCAGCACCAAGAGGCGTACCACAAATTGAAGTCACTTT 99077 Query 476137 TGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAACAAGAG 476196 |||||| ||||| |||||||| | ||||| ||||| |||||| || | ||||| Sbjct 99076 TGATATCGATGCTAATGGTATCTTGAATGTATCTGCTGTTGATAAGAGTACTGGTAAGAG 99017 Query 476197 TAAAAATATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGTAT 476256 | || || |||||||| ||| || |||||||| | | || | ||| ||||||| Sbjct 99016 CAGCAAGATCACTATTACTAACGATAAGGGTAGATTATCAAAGGACGATATTGAACGTAT 98957 Query 476257 GGTTGATGAAGC 476268 |||| |||| || Sbjct 98956 GGTTAATGATGC 98945 Score = 239 bits (264), Expect = 3e-57 Identities = 393/557 (71%), Gaps = 15/557 (3%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || ||||||||||||||||| || || ||| ||||| | ||| ||| ||| | || Sbjct 100500 GCTATTGGTATTGATTTAGGTACAACATACTCATGTGTTGGTGTATGGAGAAACGATACT 100441 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 ||||| || || | ||||| |||||||| | ||||||||||| ||||| | ||||| Sbjct 100440 GTAGATATTGTTCCAAATGATCAAGGTAACCGTACAACACCATCTTATGTAGCATTTACA 100381 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 |||||||| | ||||||||| ||||| || || |||||| ||| || || | ||| Sbjct 100380 GAAACTGAGCGTCTTATTGGTGATGCAGCGAAGAATCAAGTTGCTAGAAACCCAGAAAAT 100321 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || ||||||||||||| | | |||||| | || ||||||||| | || ||| | Sbjct 100320 ACAGTTTTTGATGCTAAGCGTCTTATTGGTAGAAAGTTTGATGATCAAGCAGTACAAAGT 100261 Query 474569 GATATGCGTCATTGGCCTTTTAAGGT-GATAAATGT--TGGTGGTAAACCATATAT-AG- 474623 |||||| ||| ||||| ||||| || | || || | |||||| || || Sbjct 100260 GATATGACTCACTGGCCATTTAAAGTAGTTAGGGGTCCAAAGGACAAACCAATCATCAGT 100201 Query 474624 --AAGCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGT 474681 ||| ||| | ||||||| || | || | ||| |||||||| | ||||| Sbjct 100200 GTGAGC--TACTTG--GGTGAAAAGAAGGAGTTCCATGCTGAAGAAATTTCTGCTATGGT 100145 Query 474682 TTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGAC--AAGAAGTAACTGATGCA 474739 ||| || ||||| ||| | | |||| ||||| | || ||| |||| Sbjct 100144 CTTACAGAAGATGAAGGAAATCTCTGAAGCATA-CTTGGGCCGCCCAATTAA-GAATGCT 100087 Query 474740 GTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGA 474799 ||| ||||||||||||| || || ||||| || |||||||||||||| || ||||| || Sbjct 100086 GTAGTTACTGTTCCAGCTTACTTCAATGACTCACAACGTCAAGCAACAAAGGATGCTGGT 100027 Query 474800 AGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCT 474859 |||||| ||| | ||||| | | || ||||| || ||||| ||||| || |||| Sbjct 100026 GCAATTGCTGGTTTGAATGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTGCC 99967 Query 474860 TATGGTCTTGATAAGAA 474876 ||||||||||||||||| Sbjct 99966 TATGGTCTTGATAAGAA 99950 >seq39 Length=423162 Score = 244 bits (270), Expect = 7e-59 Identities = 398/562 (71%), Gaps = 16/562 (3%) Strand=Plus/Minus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 |||||||| |||||||| |||||||| ||||| | | | | | ||||||| |||| Sbjct 342607 ATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAGAGTA 342548 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 || || ||| | ||||| ||||||||| | | |||||||||||||| || || ||||| Sbjct 342547 GAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCACTGAT 342488 Query 474452 ACTGA-ACATCTTATTGGAGATGCTGCTAAATATCAAGCTGC-ATCTAATCCTGTTAATA 474509 ||| | || | ||||| || | || || ||||||| | ||| ||||| ||| | | Sbjct 342487 GATGAGAGAT-TAATTGGTGAGTCAGCCAAGAATCAAGCCACTATC-AATCCAGTTCAGA 342430 Query 474510 CTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTT---GATGATACCACTGTCCAAT 474566 || | || |||| || ||| | ||||| ||| |||| |||||| || || ||| Sbjct 342429 CTTTGTTCGATGTAAAGAGACTTATTGGCCGTCGTTTTAAGGATGATTCC---GTTCAAA 342373 Query 474567 CTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG 474626 |||| | | | ||| | | | | || || | ||| ||||| || ||| ||| Sbjct 342372 AGGATAAGACTTTGTTGCCATATGAAATTATTAACAGGGATGGGAAACCTTACATACAAG 342313 Query 474627 CAATACACGCA--GGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTT 474684 | | | ||||| | || ||||| | || ||| | ||||| | ||||| || Sbjct 342312 T--TTCTGTTAAGGGTGAGAAGAAGCAATTAGCTCCAGAAGAGGTTTCTGCTATGGTCTT 342255 Query 474685 AGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAA 474743 || ||| ||||| ||| ||| ||| | |||||||| | ||||||| ||||||||| Sbjct 342254 AGTCAAGATGAAGGAAATCGCTGAGG-CTTATCTTGGTAAGGAAGTAAAGCATGCAGTAA 342196 Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 ||||||| ||||| || |||||||| |||| |||||||| || || ||||| || | Sbjct 342195 TTACTGTCCCAGCTTACTTTAATGACGCTCAGCGTCAAGCTACCAAGGATGCTGGTGCTA 342136 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 |||| || | ||||| | ||||||||||| || ||||||||||| ||| |||||| | Sbjct 342135 TTGCTGGCTTGAATGTAATCCGTATTATTAACGAGCCAACAGCAGCAGCAATTGCTTTCG 342076 Query 474864 GTCTTGATAAGAATTCTGACAA 474885 || | |||||||| |||| || Sbjct 342075 GTTTGGATAAGAAGGCTGAGAA 342054 >seq12 Length=160301 Score = 187 bits (206), Expect = 2e-41 Identities = 272/377 (72%), Gaps = 28/377 (7%) Strand=Plus/Plus Query 297322 GTTTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTATCCTTTT 297381 ||||| |||||||||||||||||||||||||||||||| | ||| ||||||| ||| Sbjct 20163 GTTTTTGATTGTTGGTTTGAATCAGGTTCTATGCCTTACGCATCTATTAATTATCCATTT 20222 Query 297382 GAAAATTCCGAAATTTTAGACACTTCACAAGATTATATT----GCAGATTTTATAACAGA 297437 |||||| | | |||| | || | || |||||| ||||||||| | ||| Sbjct 20223 GAAAAT-CAGGAATTGT------TTAATAA---TATATTCCCTGCAGATTTTGTTGGAGA 20272 Query 297438 ATCAATTGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCTATATT 297497 | | |||||||||||||| |||||||| || ||| | || | || ||||| |||| Sbjct 20273 AGGTTTAGATCAAACAAGAGGATGGTTTTACACATTAATGGTATTATCAACAGCACTATT 20332 Query 297498 TAACAAACCAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTGATGGACA 297557 | | ||||||| ||||||||| | ||||| | || | ||| || ||||||| | Sbjct 20333 TGATCAACCAGCTTTTAAAAATATTATTGTGAATGGCTTGGTTTTGGCTTCTGATGGTAA 20392 Query 297558 AAAAATGTCAAAAAG--TAAAGGTAATTATCCTGATCCA---AATATTTTGATGGATAAA 297612 ||||||||||||||| |||| || ||||| |||||| ||||| | | |||| Sbjct 20393 AAAAATGTCAAAAAGATTAAA--AAACTATCCCGATCCATTGGATATTGTTA---ATAAG 20447 Query 297613 TATGGTGCAGATACTTTACGTCTTTATTTATTATCAA--CACCTGTAGTTAAAGCCGAAT 297670 |||||||||||| |||| | |||||| | ||||| |||| || |||| ||| ||| Sbjct 20448 TATGGTGCAGATTCTTT--GAGATTATTTTTAATCAACTCACCAGTTGTTAGAGCAGAAA 20505 Query 297671 CAATTAAATTTGATGAA 297687 | | | |||| | ||| Sbjct 20506 CTTTAAGATTTAAAGAA 20522 Score = 156 bits (172), Expect = 3e-32 Identities = 335/493 (68%), Gaps = 16/493 (3%) Strand=Plus/Plus Query 295795 GATGGACCTCCATTTGCTACAGGAACTATG-CATTATGGACATATTTTAGTCTCAACTAT 295853 |||||||||||||||||||||||| ||| || ||||| ||||| | | ||| | Sbjct 18696 GATGGACCTCCATTTGCTACAGGA-CTACCACACTATGGTCATATACTTGCAGGTACTGT 18754 Query 295854 TAAAGATACCATGACTAGATATTTAACAATGAATGGTTATCAAGTTAATATGGGAATTGG 295913 ||||||| | || |||||| ||| || || ||| | | | | | || Sbjct 18755 TAAAGATGTAGTTACAAGATATGCAACCCAAAAAGGATATTACTGCGAGAGAAGGTTCGG 18814 Query 295914 TTGGGATTGCCATGGAGTTCCAATTGAA-ATG---TTGGCTaaaaaaaCTATCGGATATA 295969 |||||||| |||||| | || | ||| ||| ||| | || | || | ||| Sbjct 18815 ATGGGATTGTCATGGATTGCCGGTAGAACATGAAATTG-----ATAAGCAATT--AAATA 18867 Query 295970 TCACAA--AGA-AAGATTTATTGGAATACGGTATTGATCGTCATAATGATATTTGTCGTG 296026 |||||| ||| ||||| | ||| | ||||| ||| | ||||||| ||| | Sbjct 18868 TCACAAGCAGAGAAGATGTTTTGAGTAAAGGTATAGATTTTTATAATGAGTCATGTAGAT 18927 Query 296027 ATATGGTATTAAAATGTACTGATAAATGGTATTCTGATTTTGAGAGAATTGGAAGATGGA 296086 || ||||||| || |||| | ||| | || | |||| ||| ||||||||| || Sbjct 18928 CAATTGTATTAAGATATACTCGAGAGTGGAAATCAACTGTTGAAAGAGTTGGAAGATTGA 18987 Query 296087 TTGATATTAATAATGAATATAAAACAATGGATAAAAATTTTATGGAATCTGTTATTTGGT 296146 | || || |||||| |||||||| |||||| |||||| ||| || |||| ||| Sbjct 18988 TCGACTTTGATAATGGTTATAAAACTATGGATTTAAATTTCATGCAAACTGTGTGGTGGG 19047 Query 296147 CATTTAAACAACTTTATGAAAAGGAAATGATTTTTGAAGGTTATAAAGTTATGCCTTATT 296206 |||||| || |||| ||| ||| | | ||| | || ||||| ||| ||||| |||| Sbjct 19048 TATTTAAGCAGCTTTTTGATAAGAATCTTGTTTATAGAGCTTATAGAGTAATGCCATATT 19107 Query 296207 CTACTGGTTGCAATACACCATTATCTCATTTTGAGGCAAAACAAAATTATAAAGAGATTA 296266 |||| | ||| ||||||| |||| ||||||| || ||||||||||| ||| Sbjct 19108 CTACAGCATGCGCTACACCACTATCCAATTTTGAATGTAACTTGAATTATAAAGACGTTA 19167 Query 296267 TTGATCCATCTGT 296279 |||||||||||| Sbjct 19168 GTGATCCATCTGT 19180 >seq41 Length=345200 Score = 150 bits (166), Expect = 1e-30 Identities = 264/380 (69%), Gaps = 16/380 (4%) Strand=Plus/Plus Query 475790 GTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT 475849 || || ||||| |||||||||||| ||||||||| | ||||| | | |||| ||| Sbjct 73139 GTTAACCCTGACGAAGCTGTTGCAATGGGAGCTGCTATACAAGCCGGTGTTTTGA-AGG- 73196 Query 475850 CAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGT 475909 |||||| | || || || | | | ||||| || || | || |||||| Sbjct 73197 ---------GAGAAA-TCAAGGATCTTTTGTTACTCGACGTTACACCCTTATCTTTAGGT 73246 Query 475910 CTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGC 475969 | ||||| | ||||| || | ||| | ||| | ||||||||| | ||||| Sbjct 73247 ATAGAAACTTTGGGAGGAGTTTTTACTCGATTAATTAATAGAAATACTACAATCCCCACT 73306 Query 475970 AAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATC 476029 ||||| ||||||| |||||| | | ||||| ||||| || || || | Sbjct 73307 AAAAAGAGCCAAGTATTCTCCACTGCTGCAGATAACCAAACTCAAGTTGGAATTAAAGTT 73366 Query 476030 TTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGA-ACTTTTAATCTTGA 476088 || |||| |||||| |||| || ||||||||| |||||| | ||| || ||| Sbjct 73367 TTCCAAGGAGAAAGAGAATTTGCTGCAGATAATAAGTTGCTTGGACAATTTGAAA--TGA 73424 Query 476089 A-GGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATG 476147 || |||||||| || || ||||| ||||||||||||||||| || ||||||||||||| Sbjct 73425 TTGGAATTCCTCCAGCGCCTAGAGGGGTTCCTCAAATTGAAGTCACCTTTGATATTGATG 73484 Query 476148 CAAATGGTATTCTTAATGTT 476167 ||||||| ||| | |||||| Sbjct 73485 CAAATGGAATTATGAATGTT 73504 Score = 120 bits (132), Expect = 2e-21 Identities = 139/185 (75%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 474681 TTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGG-ACAAGAAGTAACTGATGCA 474739 |||| | ||||||||| |||| || | |||||||| | ||| |||| |||| Sbjct 72417 TTTTGGAAAAAATGAAAGAAACTGCTGAAACTTATCTTGGTAGAAGT-GTAAAGCATGCT 72475 Query 474740 GTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGA 474799 || |||||||| ||||| || |||||||||||||| |||||||||||||| ||||| || Sbjct 72476 GTTATTACTGTACCAGCCTACTTTAATGATTCTCAGCGTCAAGCAACTAAGGATGCTGGC 72535 Query 474800 AGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCT 474859 || ||||| | ||||| | | || |||||||| ||||||||||| || || || Sbjct 72536 TCTATAGCAGGCTTAAATGTGACAAGAATCATTAATGAGCCAACAGCAGCAGCCCTGGCA 72595 Query 474860 TATGG 474864 || || Sbjct 72596 TACGG 72600 >seq49 Length=416705 Score = 147 bits (162), Expect = 1e-29 Identities = 131/164 (80%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 817100 GATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAATA 817159 ||||| ||||| ||||| |||||||| ||||||||| | |||||||| ||||||||||| Sbjct 93581 GATTTCTCATCACCAAACATTGCAAAAGAAATGCATGTGGGACACTTAAGATCTACAATC 93522 Query 817160 ATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACAAAGAATAAAT 817219 ||||| || | | |||||| | ||||| || |||| ||||||| |||||| ||| Sbjct 93521 ATTGGCGACACAATATGTAGAGTTCTTGAATATTTAGGATTTGAAGTATTAAGAATTAAT 93462 Query 817220 CATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCATA 817263 || |||| |||||||| || |||||||||||| | |||| ||| Sbjct 93461 CACGTTGGAGATTGGGGTACTCAATTTGGTATGCTTATTGAATA 93418 >seq11 Length=225008 Score = 141 bits (156), Expect = 6e-28 Identities = 349/516 (68%), Gaps = 39/516 (8%) Strand=Plus/Minus Query 355249 CCAGTGCCAATACCTTCTGTTCCATTAACTAAAATCATTGGAATTACAGGTACATAAAAT 355308 || || ||||| || || || ||||| || |||||||||||||||| ||||| ||| || Sbjct 75577 CCTGTACCAATTCCATCAGTACCATTTACCAAAATCATTGGAATTATTGGTACGTAATAT 75518 Query 355309 ACTGGTTCAATCATTT---TATTATC-TTCAAATTGATGTTGCAATACATCAAAATCATG 355364 | |||||||| || || ||| | ||||| | ||| |||| | | |||| Sbjct 75517 AAAGGTTCAATTTGTTGTCCATCATCATACAAAT--AAGTT--AATAAAGGATCATCAGC 75462 Query 355365 TTGTATGAAAATATATTTAGTTAATTGATTGAGTTGTGTGAAGATATATCG---TGCACT 355421 | | |||||||||| |||| ||| | |||| || || ||||| || ||||| Sbjct 75461 CTCTGGGAAAATATATCTAGTCCATTTAGATAGTTTAGTAAATATATAACGAGCAGCACT 75402 Query 355422 TGCATTATCTTTGCCTCC--ACTTAATCTTGTACCAAATTGACCATTGGGAAGTAATAAA 355479 ||| |||||| || || ||| ||| |||||||||||||| || || || | Sbjct 75401 TGC---ATCTTTTCCACCTTCCTT--TCTACTACCAAATTGACCACATGGCTCTAGTAGA 75347 Query 355480 TTTATGTTGTTACTTCCAACATAATTTTGTGCCATTTT---TATTATAGTTTCAGTCATT 355536 |||| || |||||||||||| ||||||||||||| || ||| || ||| || | | Sbjct 75346 TTTAGATTATTACTTCCAACAAAATTTTGTGCCATATTAACAATTGTACTTT--GT-AAT 75290 Query 355537 GACTGTTCTCCATGATGATATTTAGTTCTTTTCGAAACTGCACCTTGTAATTCAGATACT 355596 || ||||||||||||||| | | || | ||| ||| ||||| | ||| Sbjct 75289 GATGATTCTCCATGATGATAAGCACTATGTTCAGCAACATAACCAGCTAATTGTGCAACT 75230 Query 355597 TTAATTTCTTCTTTATAAATACCTTCTTCCTCTGAA----CCATACAATACTTTTCTTTG 355652 |||| ||| | ||| | ||| || | | || || | | |||||||||||| Sbjct 75229 TTAAGTTCATTATTA-----AGCTTTTT--TTTAAAGGTTGCAAAAAGTACTTTTCTTTG 75177 Query 355653 AGATGGTTTAAGACCGTCAGCTATGTTAGGTATTGATCTCATATTATC--ATCGACTGAA 355710 ||||| | ||| || || || || || ||||| || |||| ||| ||| | Sbjct 75176 TCCAGGTTTTAAACCATCTAATAAATTTGGAATAGATCTAGTAGTATCATATCTACT--A 75119 Query 355711 AATGAAATAAGTTCGCGATGAATAAAATCATAATAT 355746 ||| | | |||||| ||||||||||||| ||||| Sbjct 75118 AATAATACAAGTTCTTTATGAATAAAATCAAAATAT 75083 >seq6 Length=322908 Score = 134 bits (148), Expect = 9e-26 Identities = 136/177 (77%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 480593 ATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTG 480652 ||| ||||||| |||||||||| |||||| | ||||||||||||||| || | ||| || Sbjct 207036 ATTGTAATCAGATAGAGTTCTGCCATCTTCCAATTGCTTTCCAGCAAAGATCAAACGCTG 206977 Query 480653 TTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 ||||||||||||||| || ||||| || || |||||| || ||| ||||||||||| Sbjct 206976 TTGATCAGGAGGAATGCCCTCCTTATCCTGGATCTTTGCCTTTACATTCTCAATAGTATC 206917 Query 480713 AGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || | ||| | || || || || || || ||||| ||||| |||||||| Sbjct 206916 CGAAGGTTCAACTTCCAATGTGATGGTCTTCCCTGTTAGAGTTTTAACAAAAATTTG 206860 >seq14 Length=135702 Score = 127 bits (140), Expect = 1e-23 Identities = 235/337 (70%), Gaps = 16/337 (5%) Strand=Plus/Plus Query 269140 GCTCTAGAGTGAGTTTTATCGCCCACCATTTGTTTTAAACGCTGATAATATGTCGGACCA 269199 ||||||| ||| |||||||| | ||||| ||||||| | ||||| || || || ||| Sbjct 76343 GCTCTAGCATGAATTTTATCGTCAACCATATGTTTTAGTCTTTGATAGTAAGTTGGTCCA 76402 Query 269200 ATAAATATT-TTGACATGCATTTTTTCTCCCGTCATACCATTTGTCATTGTTTCATTTCC 269258 || || ||| ||||| | || | | | ||| || ||||| |||| ||||||||| Sbjct 76403 ATGAAGATTCTTGAC-TCCAATCTCTTTCCTGTATGGCCATTGTACATTACTTCATTTCC 76461 Query 269259 CCATGCTTC--ATATCCG----TATG-AAACTAGTTCATCATTTATTTTATTAATATCTA 269311 || ||| | |||| |||| |||| | || || | || | | || | Sbjct 76462 --ATTTTTCTGAAATCCAGAACTATGTAAACGGCTAGAT-ATCTCTTCAACTGTGATTTT 76518 Query 269312 CACCTGTAAATGGTGTCGCATCACCATATACTCCTTTAATAGCACATACTTTTCCTAATA 269371 | ||||| || || ||||| || | | ||||| ||| ||||| ||||||| | || Sbjct 76519 C----GTAAAAGGAGTTGCATCGCCCTCCAATCCTTGAATTGCACACGCTTTTCCAAGTA 76574 Query 269372 GACATTCAATCAATTGTCCAATGGTCATACGTTTTGGCATACAATTAGGATTAATAATAA 269431 |||||||||| || || ||||| |||||||| || ||| || |||||| || |||| Sbjct 76575 GACATTCAATTAAATGACCAATTGTCATACGCGAAGGAATAGCATGAGGATTCATGATAA 76634 Query 269432 TATCTGGCACAAGTCCAGATTTAGTAAATGGCATATC 269468 | ||||| | || |||| || |||||||||||||| Sbjct 76635 TGTCTGGAATAATTCCATCTTGTGTAAATGGCATATC 76671 >seq45 Length=133594 Score = 123 bits (136), Expect = 2e-22 Identities = 133/176 (76%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || ||||||| || ||||| ||| || | ||||||||| ||||| || | ||||||| Sbjct 54786 TTGTAATCAGAGAGGGTTCTACCATCCTCTAATTGCTTTCCTGCAAAGATCAAACGTTGT 54727 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 |||||||| |||||||||||||| |||||||||||| || ||| || |||||||| Sbjct 54726 TGATCAGGTGGAATTCCTTCCTTATCTTGAATCTTTGCCTTAACATTCTCGATAGTATCT 54667 Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || | ||| | || ||||| || || || | ||||||||| ||||| || Sbjct 54666 GAAGGTTCAACTTCCAAAGTGATAGTCTTTCCTGTCAAAGTCTTAACAAAAATCTG 54611 Score = 116 bits (128), Expect = 2e-20 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 480572 AAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTT 480631 ||||| ||| | ||| || || ||||||| |||||||| ||| || | ||| || Sbjct 55262 AAGTGGACTCTTTTTG--AATGTTGTAATCAGAGAGAGTTCTACCATCCTCTAATTGTTT 55205 Query 480632 TCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTG 480691 ||| ||||| || | ||||||||||||||| |||||||||||||| |||||||||||| Sbjct 55204 TCCTGCAAAGATCAAACGTTGTTGATCAGGTGGAATTCCTTCCTTATCTTGAATCTTTGC 55145 Query 480692 TTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751 || ||| || |||||||| | | | ||| | || || || || || || | Sbjct 55144 CTTAACATTCTCGATAGTATCTGAAGGCTCAACTTCTAAAGTGATGGTCTTTCCTGTCAA 55085 Query 480752 AGTCTTAACGAAAATTTG 480769 |||||||||||||| || Sbjct 55084 GGTCTTAACGAAAATCTG 55067 Score = 100 bits (110), Expect = 2e-15 Identities = 130/177 (73%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || ||||||| |||||||| ||| || | ||| ||||| ||||| || | ||||||| Sbjct 55014 TTGTAATCAGAGAGAGTTCTACCATCCTCTAATTGTTTTCCTGCAAAGATCAAACGTTGT 54955 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 |||||||| || || || ||||| |||||||||||| || || ||||| ||||| Sbjct 54954 TGATCAGGTGGTATCCCCTCCTTATCTTGAATCTTTGCCTTAACGTTCTCAATTGTATCT 54895 Query 480714 G-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | || || ||| || || || || || || | |||||| |||||||| || Sbjct 54894 GAAGGCTCAACTTCCAA-AGTGATGGTCTTTCCCGTCAAAGTCTTGACGAAAATCTG 54839 >seq46 Length=385502 Score = 105 bits (116), Expect = 4e-17 Identities = 330/504 (65%), Gaps = 28/504 (6%) Strand=Plus/Minus Query 894849 TTATAATGGTTTTGAACCAAGTGGTAGAATACATATTGCACAAGC---ATT-AATAACAG 894904 |||| |||| ||||| || || ||||| |||||||||||| ||| || | || Sbjct 250160 TTATGATGGATTTGAGCCTTCAGGAAGAATGCATATTGCACAATGTATATTGAAGACCAT 250101 Query 894905 TAATGAATACAAATGAAATTATTTCTTGTGGAGGAAGGATGATAATTTATATTGCTGATT 894964 ||||| | | || | || | | | ||||| | | | || | ||| | || |||| Sbjct 250100 TAATGTAAATAAGTTAACTGAAT----GTGGATGCATTTTCGTATTCTATGTAGCAGATT 250045 Query 894965 TATTTGCAAAAATGAATaaaaaaaTGGATTCTGATCTTGATAAAATAAAAGATGTAGGTT 895024 ||||| | | ||||| || |||| |||||||| ||||| || ||| ||| Sbjct 250044 GGTTTGCTCTACTCAATAATAAGATGGGCGGCGATCTTGAGAAAATCAAGATTGTTGGTG 249985 Query 895025 TATATTTCATTGAAGTTTTTAAAGCATGTGGTATTAATATGTCTGAAACAAAGTTTATTT 895084 |||||| || | | | || || || || ||||| | | || ||| ||| Sbjct 249984 AATATTTTGTTCACATATGGAAGGCTGCAGGAATGGATATGACAAATGTAAGATTTGTTT 249925 Query 895085 GGTCAAGTGATTTATTTAATA---AAAATCCTGAAAAATATTTTACAAGATTGTTAGATA 895141 || || |||||| ||||| || || || | | |||| |||| | || || | Sbjct 249924 GGGCATCTGATTTTATTAATGGCCAAGATTCTAATGAGTATTGGTTAAGAGTTTTTGACA 249865 Query 895142 TTTCCGAAGAAACCTCTC--TTTCCAGGAGTAAAAGATGTTGTCAAATTATGGGTCGAAA 895199 |||| ||||| | || | || | |||||||||||| ||||||||||| || | Sbjct 249864 TTTCT--AGAAAGTTTAACATTACTAGAATTAAAAGATGTTGCCAAATTATGGGAAGACA 249807 Query 895200 AGACGGAGATGAATTATC-TGTTTCTCAAATTATT-TATCCTTGCATGCAAGTTGCAGAT 895257 ||| | |||||| | | ||| || | |||| ||||| ||||||||| ||| ||| Sbjct 249806 AGAAAGTGATGAACAACCATGTGCTTC--AGTATTCTATCCATGCATGCAATGTGCTGAT 249749 Query 895258 ATTTTTGAACTCGAACCTGAAGGAATAGATATTTGTCAATTAGGTGTTGATCAACGTAAA 895317 || || | ||| || | ||||||||| || |||||| | |||||| | ||| Sbjct 249748 ATATTCCAGCTCAAAGC---------AGATATTTGCCAGTTAGGTATGGATCAAAGAAAA 249698 Query 895318 GTTAATATGCTCGCTCTCGAATAT 895341 ||||| ||||| ||| |||||| Sbjct 249697 GTTAACATGCTTGCTAGAGAATAT 249674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268176754993436