Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20meleagridis_20[genbank_20GCA_5F001593445.1_202016- 03-17] 57 sequences; 8,973,200 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq23 603 1e-167 seq39 354 1e-92 seq45 167 3e-36 seq41 87.8 2e-12 >seq23 Length=109376 Score = 603 bits (668), Expect = 1e-167 Identities = 1108/1599 (69%), Gaps = 31/1599 (2%) Strand=Plus/Minus Query 195295 TCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGA 195354 || |||||||||||| |||||||| || || ||||||||||||||||||||| ||| || Sbjct 100504 TCCAGCTATTGGTATTGATTTAGGTACAACATACTCATGTGTTGGTGTATGGAGAAACGA 100445 Query 195355 TCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTT 195414 | |||||| ||| | || ||||| ||||| ||||||||||| ||||| || || || || Sbjct 100444 TACTGTAGATATTGTTCCAAATGATCAAGGTAACCGTACAACACCATCTTATGTAGCATT 100385 Query 195415 TACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTAT 195474 |||||| | ||| ||||| |||| ||||| || || ||||| |||| ||||| Sbjct 100384 TACAGAAACTGAGCGTCTTATTGGTGATGCAGCGAAGAATCAAGTTGCTAGAAACCCAGA 100325 Query 195475 CAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCA 195534 ||||| || ||||| || ||||||||||||||| | |||||| ||| | ||| || Sbjct 100324 AAATACAGTTTTTGATGCTAAGCGTCTTATTGGTAGAAAGTTTGATGATCAAGCAGTACA 100265 Query 195535 AGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGAT 195594 | ||||| | ||||| | | | |||| ||| ||| || || || || || Sbjct 100264 AAGTGATATGACTCACTGGCCATTTAAAGTAGTTAGGGGTCCAAAGGACAAACCAATCAT 100205 Query 195595 TAATGTTGAATTTC-ACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGG 195653 | || ||| | | ||||| ||||| | || | | ||||||||||| |||||| Sbjct 100204 CAGTG-TGAGCTACTTGGGTGAAAAGAAGGAGTTCCATGCTGAAGAAATTTCTGCTATGG 100146 Query 195654 TGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAG 195713 | || ||||||||||| | | ||| | | | |||| | | || |||| | Sbjct 100145 TCTTACAGAAGATGAAGGAAATCTCTGAAGCATACTTGGGCCGCCCAATTAAGAATGCTG 100086 Query 195714 TTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTG 195773 | || ||||| || |||||||||| ||| |||||||| || || |||||||| |||| || Sbjct 100085 TAGTTACTGTTCCAGCTTACTTCAATGACTCACAACGTCAAGCAACAAAGGATGCTGGTG 100026 Query 195774 CTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCT 195832 | ||||| ||| | || ||| | ||||| || || || ||||| || ||||| ||||| Sbjct 100025 CAATTGCTGGTTTGAA-TGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTGCC 99967 Query 195833 TATGGTCTGGACAAGAACAAGGAC-GAAGATAAAAATGTATTGATCTTTGATCTCGGTGG 195891 |||||||| || ||||| | | || | || | ||||||||||||||| ||| | ||||| Sbjct 99966 TATGGTCTTGATAAGAA-AGGAACTGGTGAGAGAAATGTATTGATCTTCGATTTAGGTGG 99908 Query 195892 TGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTAC 195951 |||||| |||||||| ||| | | | |||||||| |||||| || ||||| |||||||| Sbjct 99907 TGGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTCAAGGCTAC 99848 Query 195952 TGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTC 196011 |||||||||||||| | |||||||||||||| ||| | ||| | | | ||| Sbjct 99847 CGCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAACAGACTTGT-TGAATTCTGTG 99789 Query 196012 TG-ATGAGTTCCGTCGAAAGAATA-AG--AAAGATATTTCTGGAAATCCTAGGGCTCTTC 196067 || | || ||| ||||||||| || | ||| | || |||| |||| || | Sbjct 99788 TGCAAGATTTCAAGAGAAAGAATAGAGGTATGGATTTAACTACAAATGCTAGAGCCTTAA 99729 Query 196068 GTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAA 196127 | | || || ||| |||||| ||||| || ||||| | || ||| | ||||| | | Sbjct 99728 GAAGACTCAGAACTCAATGTGAGCGTGCAAAGAGAACTTTGTCATCTTCTACTCAAGCTA 99669 Query 196128 TGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCAC 196187 ||||| | ||||| | | ||| || ||||| | || | | | | | || Sbjct 99668 CAATTGAGTTAGATTCACTCTATGAAGGTATTGATTACTCTGTTGCCGTCAGTAGAGCTA 99609 Query 196188 GTTTTGAAGAGTTAAACTCTGATTTGTT--TAGGAAGTGTATGGAACCTGTTGAACAAGT 196245 | || ||||| | | |||||| || | || | || | || ||||| |||| Sbjct 99608 GATTCGAAGAACTCTGCGCTGATTACTTCCGTGCAACTTTA--GCTCCAGTTGAGAAAGT 99551 Query 196246 ACTTCGTGACGCAAAGATGGATAAG---TCTAAGGTTGATGAAATTGTCCTTGTGGGAGG 196302 ||| || || ||||||||| ||| || |||| |||| | || || || Sbjct 99550 ACTCAAGGATGCCGGTATGGATAAGAGATCT---GTACATGATGTTGTATTGGTTGGTGG 99494 Query 196303 ATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTT 196362 || || |||||||| ||| |||| || || ||||| || |||||| Sbjct 99493 TTCTACACGTATTCCAAAGGTTCAGGCTTTGATTCAGGAATTCTTTAACGGTAAAGAGCC 99434 Query 196363 AAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTAT 196422 | |||| | ||||| || |||||||| ||||| |||||||| || || || ||||||| Sbjct 99433 ATGCAAAGCAATCAATCCAGATGAAGCCGTTGCCTATGGTGCTGCTGTACAAGCTGCTA- 99375 Query 196423 TCTCTCAGGTGTTGA-CAAT--AATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACC 196479 ||| | || ||| |||| | ||| || ||||| | | | |||||||| || Sbjct 99374 --TCTTAAATGGTGAGCAATCCTCTGCCGTTCAGGATCTCTTATTGTTGGATGTTGCTCC 99317 Query 196480 CGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACAC 196539 |||| || ||| | ||||| || |||||||||||||| || ||||||| | || || Sbjct 99316 ATTATCACTTGGTTTAGAAACTGCTGGTGGTGTTATGACCAAGCTTATTGAGCGTAATAC 99257 Query 196540 AACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGT 196599 |||||| || | |||||| |||||||| | || ||| | ||||| || ||||| Sbjct 99256 AACTATCCCAGCAAAGAAGACTCAAGTCTTCACTACCTATGCTGATAACCAGAGCGGTGT 99197 Query 196600 TCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAAC 196659 || || || |||||||| || | | | |||||||||||||| || |||| Sbjct 99196 CTTGATCCAGGTTTATGAAGGTGAGAGAGCAATGACTAAGGATAACCATCTTCTCGGAAA 99137 Query 196660 TTTCGAT-TTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCT 196718 ||| || |||| || |||||| | ||||| ||||| || ||||| ||| | || | Sbjct 99136 GTTCCATCTTGA-TGGTATTCCACCAGCACCAAGAGGCGTACCACAAATTGAAGTCACTT 99078 Query 196719 TCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAA-A 196777 | ||||| || || ||||| || | || || | |||| || ||| | |||| || | Sbjct 99077 TTGATATCGATGCTAATGGTATCTTGAATGTATCTGCTGTTGATAAGAGTACTGGTAAGA 99018 Query 196778 TCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGT 196837 | | ||||| ||||| || || ||||| | | || ||||| || ||||||||| Sbjct 99017 GCAG-CAAGATCACTATTACTAACGATAAGGGTAGATTATCAAAGGACGATATTGAACGT 98959 Query 196838 ATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAG 196876 |||||| | ||||| || || |||| || || || ||| Sbjct 98958 ATGGTTAATGATGCTGAGAAATACAAGGGTGAGGATGAG 98920 >seq39 Length=423162 Score = 354 bits (392), Expect = 1e-92 Identities = 1035/1572 (66%), Gaps = 48/1572 (3%) Strand=Plus/Minus Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357 || |||||||||||||||||| |||||||| |||||||||||| | | | |||| | | Sbjct 342611 AGTTATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAG 342552 Query 195358 TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417 ||||||||||| || ||||| ||||| || |||| || ||||| || || | || || Sbjct 342551 AGTAGAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCAC 342492 Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAA 195477 ||| |||| | | |||| || | || || ||||| | |||| || || | | Sbjct 342491 TGATGATGAGAGATTAATTGGTGAGTCAGCCAAGAATCAAGCCACTATCAATCCAGTTCA 342432 Query 195478 TACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGA 195537 ||| | || || | ||| | |||||||| || ||| |||| | || ||| | Sbjct 342431 GACTTTGTTCGATGTAAAGAGACTTATTGGCCGTCGTTTTAAGGATGATTCCGTTCAAAA 342372 Query 195538 CGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAA 195597 |||| | | | | |||||| || || | | || || || ||| || | Sbjct 342371 GGATAAGACTTTGTTGCCATATGAAATTATTAACAG---GGATGGGAAACCTTACATACA 342315 Query 195598 TGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 ||| || | ||||||||||| ||||| ||||| ||||| |||| ||||||| || Sbjct 342314 AGTTTCTGTTAAGGGTGAGAAGAAGCAATTAGCTCCAGAAGAGGTTTCTGCTATGGTCTT 342255 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 | ||||||||||| | || || ||| | ||||| || || ||||||| | Sbjct 342254 AGTCAAGATGAAGGAAATCGCTGAGGCTTATCTTGGTAAGGAAGTAAAGCATGCAGTAAT 342195 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 ||||| || |||||||| | ||| | || || || || || ||||| |||| |||||| Sbjct 342194 TACTGTCCCAGCTTACTTTAATGACGCTCAGCGTCAAGCTACCAAGGATGCTGGTGCTAT 342135 Query 195778 TGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATG 195836 ||| || | || ||| | | ||||| || || |||||||| || |||||||||| | Sbjct 342134 TGCTGGCTTGAA-TGTAATCCGTATTATTAACGAGCCAACAGCAGCAGCAATTGCTTTCG 342076 Query 195837 GTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTA 195896 || |||| ||||| || ||||| | | || | | ||| | |||||||||| Sbjct 342075 GTTTGGATAAGAAGGCTGA-GAAGAGCA-----TTTTAGTATACGATTTGGGTGGTGGTA 342022 Query 195897 CGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTG 195956 | |||||||| || || | | ||||| ||| | ||||| || ||||| | Sbjct 342021 CTTTTGATGTTTCTCTCTTGACCATTGATAACGGTGTTTTCGAGGTCGTTGCTACAAGCG 341962 Query 195957 GTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGTCT-GA 196014 ||||||| || | || ||||| |||||||| | || | ||| ||| || || Sbjct 341961 GTGATACCCACTTGGGAGGTGAGGATTTCGACCAGAGAGTTATGGATCACTTTATCAAGA 341902 Query 196015 TGAGTTCCGTCGAA---AGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCG 196071 | | | |||||| || | ||| | | || |||| || || || |||| | Sbjct 341901 TCA-TCAAGTCGAAGACAGGA-AAGGATGTTAAGTCTGACAAG---AGAGCCCTTCAGAG 341847 Query 196072 GCTTAGGACTGCATGT-GA-ACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATG 196129 |||||| | | | || || | || | || || |||| ||||| | | ||| | | Sbjct 341846 GCTTAGAAGAG-AGGTCGAGAAGT-CGAAGAGAGCTCTTTCTTCAGCTCCACAAGTTAAG 341789 Query 196130 GTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGT 196189 || |||||||| ||| | || | | || || ||| | ||| | || Sbjct 341788 GTCGAGATTGAAGGTTTGATGGAGGATGTAGATTTGAGCGAAACCTTGACCAGAGCCAAG 341729 Query 196190 TTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTT 196249 || || ||||| || |||| ||||| || ||| || || || ||| | | || ||| Sbjct 341728 TTCGACGAGTTGAATGCTGACTTGTTCAGAAAGACAATCGAGCCAGTTAAGAAGGTTCTT 341669 Query 196250 CGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACC 196309 || || || | ||||| |||| || || || || | || || || || || Sbjct 341668 GAGGATGCTGGAATCAAAAAGTCCGAGGTAGACGAGATCGTTTTGGTCGGTGGTTCTACT 341609 Query 196310 CGTATTCCGAAGATTCAACAGATGCTT--TCTAGC--TTCTTCAATAATAAAGATTTAAA 196365 ||||| || ||||||||| ||| || || ||||| | || || ||| Sbjct 341608 CGTATCCCCAAGATTCAAGC----CTTAATCAAGGAGTTCTTTGACGGAAAGGAGCCAAA 341553 Query 196366 CAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCT 196425 || | |||||||| |||||||| || ||||||||||| ||||| || |||| ||| | Sbjct 341552 CAGAGGTATCAACCCAGATGAAGCCGTCGCTTATGGTGCTGCCGTACAAGCTGGTATATT 341493 Query 196426 CTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATC 196485 |||||| | | || | ||| | | ||| | |||||| | || || | Sbjct 341492 GGCAGGTGAAGGCGGTAGT---------GATTTGTTACTATTGGATGTTACTCCTTTAAC 341442 Query 196486 CCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTAT 196545 | ||| |||| |||| ||||| |||||||| ||| | |||| || ||||| | | Sbjct 341441 TTTAGGTATTGAGACAGTTGGTGGAGTTATGACAAAACTCATTGGCAGAAACACCGTTGT 341382 Query 196546 TCCGACTAAGAAGGAACAAGTCTTTTCA--ACGTATTCCGATAATCAACCAGGTGTTCAT 196603 ||| || |||||| || || ||||| || || ||||| || |||| ||| | | Sbjct 341381 TCCAACAAAGAAGAGCCAGGT--TTTCAGTACTTACCAAGATAACCAGCCAGCTGTACTT 341324 Query 196604 ATTCAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTT 196662 || || || ||||| || || || ||| || | |||||||| | || || |||| || Sbjct 341323 ATCCAGGTTTATGAGGGTGAGCG-TCCAATGACCAAGGATAATAACCTTCTCGGAAAATT 341265 Query 196663 CGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGA 196722 ||| | | || || ||| | || || ||||||||||| || ||| | ||| ||| || Sbjct 341264 CGAACTTTCTGGAATCCCACCAGCTCCAAGAGGTGTTCCCCAAATTGAGGTTACCTTTGA 341205 Query 196723 TATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGA 196782 || || | |||| ||| || | |||| || |||| |||| |||| ||||| || Sbjct 341204 GATTGATACTGATGGTATTTTACAAGTCAGTGCAAAGGATAAGGGAACTGGTAAATCCGA 341145 Query 196783 AAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGT 196842 |||||| || || ||||| ||||| | || || ||||||| || || |||||| | Sbjct 341144 GAAGATTACCATCACAAATGATAAGGGTAGACTCTCACAGGAGGACATAGAGCGTATGAT 341085 Query 196843 TCAAGATGCGGA 196854 | | || || || Sbjct 341084 TAAGGAGGCTGA 341073 >seq45 Length=133594 Score = 167 bits (184), Expect = 3e-36 Identities = 176/232 (76%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| || || || || ||| | || ||||| || ||||| | || |||||| Sbjct 55059 GTGGTATGCAGATTTTCGTTAAGACCTTGACAGGAAAGACCATCACTTTAGAAGTTGAGC 55118 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| || ||||| || | || || |||||||||||||||||||| |||||||| | Sbjct 55119 CTTCAGATACTATCGAGAATGTTAAGGCAAAGATTCAAGATAAGGAAGGAATTCCACCTG 55178 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 |||| ||||| | || ||||| || ||||| | || ||||| | || ||| |||||| Sbjct 55179 ATCAACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATT 55238 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| ||||||| ||||| ||| ||||| | || | || ||| | || || Sbjct 55239 ACAACATTCAAAAAGAGTCCACTTTACACTTAGTATTGAGACTTAGAGGCGG 55290 Score = 165 bits (182), Expect = 1e-35 Identities = 174/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 171861 TATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920 |||||| || ||||| || || | || ||||| |||||||| | || ||||| | || Sbjct 54607 TATGCAGATTTTTGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTC 54666 Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980 ||| || ||||| || | || || |||||||||||||||||||| |||||||| ||||| Sbjct 54667 AGATACTATCGAGAATGTTAAGGCAAAGATTCAAGATAAGGAAGGAATTCCACCTGATCA 54726 Query 171981 GCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAA 172040 ||||| | || ||||| || || || | || ||||| | |||||| |||||||||| Sbjct 54727 ACAACGTTTGATCTTTGCAGGAAAGCAATTAGAGGATGGTAGAACCCTCTCTGATTACAA 54786 Query 172041 CGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | ||||||| |||||||| |||| | || | || || |||||||| Sbjct 54787 CATTCAAAAAGAGTCTACCTTACATTTAGTATTGAGACTCAGGGGTGGT 54835 Score = 159 bits (176), Expect = 5e-34 Identities = 175/233 (75%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| || || || || || | || ||||| || ||||| | || |||||| Sbjct 54831 GTGGTATGCAGATTTTCGTCAAGACTTTGACGGGAAAGACCATCACTTTGGAAGTTGAGC 54890 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| ||||| || ||| | || || ||||||||||||||||| || || ||||| | Sbjct 54891 CTTCAGATACAATTGAGAACGTTAAGGCAAAGATTCAAGATAAGGAGGGGATACCACCTG 54950 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 |||| ||||| | || ||||| || ||||| | || ||||| | || ||| |||||| Sbjct 54951 ATCAACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATT 55010 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| ||||||| |||||||| |||| | || | || || |||||||| Sbjct 55011 ACAACATTCAAAAAGAGTCTACCTTACATTTAGTATTGAGACTCAGGGGTGGT 55063 >seq41 Length=345200 Score = 87.8 bits (96), Expect = 2e-12 Identities = 197/296 (67%), Gaps = 0/296 (0%) Strand=Plus/Plus Query 196454 GATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTT 196513 |||||| || |||| || ||| ||||| |||| | ||| | ||||| ||| || ||| Sbjct 73208 GATCTTTTGTTACTCGACGTTACACCCTTATCTTTAGGTATAGAAACTTTGGGAGGAGTT 73267 Query 196514 ATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCA 196573 | ||| | | ||| |||| || || || || || ||||| ||| ||||| || || Sbjct 73268 TTTACTCGATTAATTAATAGAAATACTACAATCCCCACTAAAAAGAGCCAAGTATTCTCC 73327 Query 196574 ACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGT 196633 || | | ||||| ||| | ||| ||| |||| | |||||||| | | Sbjct 73328 ACTGCTGCAGATAACCAAACTCAAGTTGGAATTAAAGTTTTCCAAGGAGAAAGAGAATTT 73387 Query 196634 GCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGA 196693 || ||||| | | |||||| || || ||| || ||||| | || || ||| Sbjct 73388 GCTGCAGATAATAAGTTGCTTGGACAATTTGAAATGATTGGAATTCCTCCAGCGCCTAGA 73447 Query 196694 GGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGT 196749 || ||||| || ||| | || ||| ||||| || |||||||||||| | || || Sbjct 73448 GGGGTTCCTCAAATTGAAGTCACCTTTGATATTGATGCAAATGGAATTATGAATGT 73503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657861931273040