Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20meleagridis_20[genbank_20GCA_5F001593445.1_202016- 03-17] 57 sequences; 8,973,200 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq11 91.5 2e-13 >seq11 Length=225008 Score = 91.5 bits (100), Expect = 2e-13 Identities = 255/388 (66%), Gaps = 24/388 (6%) Strand=Plus/Plus Query 162999 TTAAGGTTGCTCAATTAAGTGGGTATGTTGCGGAACAAACAGACTATAAACACGGTGAAC 163058 |||| ||||| |||||| ||| |||||||| ||||| | | ||| | || || ||| Sbjct 75226 TTAAAGTTGCACAATTAGCTGGTTATGTTGCTGAACATAGTGCTTATCATCATGGAGAAT 75285 Query 163059 AAAATTTATGTGAAACTATAATT---AAGTTTGCCCAAGATTTTGTTGGTACAAATAATA 163115 | ||| ||| || |||| || | || ||| |||||||||| | |||||| Sbjct 75286 CATCATTAC---AAAGTACAATTGTTAATATGGCACAAAATTTTGTTGGAAGTAATAATC 75342 Query 163116 TAGCATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTC-- 163173 || |||| || || |||||||||||||| ||| ||||| || |||||| | Sbjct 75343 TAAATCTACTAGAGCCATGTGGTCAATTTGGTAGTAGAAAGGAAGGTGGAAAAGATGCAA 75402 Query 163174 -TGCGGCATCAAGATATATTTATACCAAACCAAATAAAATATTAAAATATATATTTAGAG 163232 ||| || || | ||||| | ||| |||| | |||| | |||||| || || Sbjct 75403 GTGCTGC-TC--GTTATATATTTACTAAACTATCTAAATGGACTAGATATATTTTCCCAG 75459 Query 163233 AAGAAGATGACCCTATTTTAAATTAT---ACTGTTGAGGG---------TGAACCTGTTC 163280 | | ||||| ||| | |||| |||| || ||| || ||||||| | Sbjct 75460 AGGCTGATGATCCTTTATTAACTTATTTGTATGATGATGGACAACAAATTGAACCTTTAT 75519 Query 163281 ATTTTATCCCAGTGATTCCATTAATTTTAATTAATGGTTCTATTGGTATTGGAACAGGAT 163340 ||| | ||| | |||||| | ||||| | |||||| || ||| ||||| ||||| | Sbjct 75520 ATTACGTACCAATAATTCCAATGATTTTGGTAAATGGTACTGATGGAATTGGTACAGGTT 75579 Query 163341 GGTCATGTTTTATCCCTCAATATAATCC 163368 || ||| | ||| | |||||||| Sbjct 75580 GGAGTAGTTCAGTTCCTAATTATAATCC 75607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635177147435960