Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20meleagridis_20[genbank_20GCA_5F001593445.1_202016- 03-17] 57 sequences; 8,973,200 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq11 89.7 6e-13 >seq11 Length=225008 Score = 89.7 bits (98), Expect = 6e-13 Identities = 182/266 (68%), Gaps = 12/266 (5%) Strand=Plus/Plus Query 165161 TTAAAGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAACATGGTGAAC 165220 |||||||||| |||||| ||| |||||||| ||||| | | |||| | ||||| ||| Sbjct 75226 TTAAAGTTGCACAATTAGCTGGTTATGTTGCTGAACATAGTGCTTATCATCATGGAGAAT 75285 Query 165221 AAAATTTATGTGAAACTATAATT---AAGTTTGCCCAAGATTTTGTTGGTACAAATAATA 165277 | ||| ||| || |||| || | || ||| |||||||||| | |||||| Sbjct 75286 CATCATTAC---AAAGTACAATTGTTAATATGGCACAAAATTTTGTTGGAAGTAATAATC 75342 Query 165278 TAGCATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTC-- 165335 || |||| || || |||||||||||||| ||| ||||| || |||||| | Sbjct 75343 TAAATCTACTAGAGCCATGTGGTCAATTTGGTAGTAGAAAGGAAGGTGGAAAAGATGCAA 75402 Query 165336 -TGCGGCATCAAGATATATTTATACCAAACCACATAAAATATTAAAATATATATTTAGAG 165394 ||| || || | ||||| | ||| |||| | |||| | |||||| || || Sbjct 75403 GTGCTGC-TC--GTTATATATTTACTAAACTATCTAAATGGACTAGATATATTTTCCCAG 75459 Query 165395 AAGAAGATGACCCTATTTTAAATTAT 165420 | | ||||| ||| | |||| |||| Sbjct 75460 AGGCTGATGATCCTTTATTAACTTAT 75485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628530752171520