Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20meleagridis_20[genbank_20GCA_5F001593445.1_202016- 03-17] 57 sequences; 8,973,200 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq23 540 7e-148 seq39 197 1e-44 seq41 154 1e-31 seq49 111 1e-18 seq14 107 1e-17 seq11 102 6e-16 seq37 96.9 3e-14 seq46 86.0 5e-11 >seq23 Length=109376 Score = 540 bits (598), Expect = 7e-148 Identities = 1074/1574 (68%), Gaps = 40/1574 (3%) Strand=Plus/Plus Query 281329 AGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAAT 281388 ||| || ||| ||| | ||||| | || | || ||||| || || |||||||| Sbjct 98944 AGCATCATTAACCATACGTTCAATATCGTCCTTTGATAATCTACCCTTATCGTTAGTAAT 99003 Query 281389 AGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATT 281448 ||| || || || || || |||||| | |||| ||||| | |||||||| Sbjct 99004 AGTGATCTTGCTGCTCTTACCAGTACTCTTATCAACAGCAGATACATTCAAGATACCATT 99063 Query 281449 GGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCC 281508 ||||| | |||||| |||||||||||||| || || ||||| | || ||||| || || Sbjct 99064 AGCATCGATATCAAAAGTGACTTCAATTTGTGGTACGCCTCTTGGTGCTGGTGGAATACC 99123 Query 281509 TTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAA 281568 || | || || |||| ||| || ||||| ||||| | | || ||||| || | Sbjct 99124 ATCAAGATGGAACTTTCCGAGAAGATGGTTATCCTTAGTCATTGCTCTCTCACCTTCATA 99183 Query 281569 AATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTT 281628 || ||||| || | | || ||||| | ||| || || || ||| | || || Sbjct 99184 AACCTGGATCAAGACACCGCTCTGGTTATCAGCATAGGTAGTGAAGACTTGAGTCTTCTT 99243 Query 281629 ACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAA 281688 || || ||||| || | ||||||| |||||||||| ||||||||| |||||||| Sbjct 99244 TGCTGGGATAGTTGTATTACGCTCAATAAGCTTGGTCATAACACCACCAGCAGTTTCTAA 99303 Query 281689 ACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTG 281748 |||||| || | |||| ||||| | | | | || |||| || | ||| Sbjct 99304 ACCAAGTGATAATGGAGCAACATCCAACAATAAGAGATCCTGAACGG---CAGAGGATTG 99360 Query 281749 ACCAACA---AGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATT 281805 || || | ||||| ||||| | |||||||||||| ||||| |||||||| ||||| Sbjct 99361 CTCACCATTTAAGATAGCAGCTTGTACAGCAGCACCATAGGCAACGGCTTCATCTGGATT 99420 Query 281806 AACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT--TGAAAGAAGTTGTCTTA-CCTT 281862 | | || | | | |||||| || ||| |||| |||| || | || | |||| Sbjct 99421 GATTGCTTTGCATGGCTCTTTACCGTT-AAAGAATTCCTGAATCAAA--GCCTGAACCTT 99477 Query 281863 AGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTT 281922 |||||||| | || || ||||| ||||||| ||||| || | ||||||| Sbjct 99478 TGGAATACGTGTAGAACCACCAACCAATACAACATCATGTACAGATCTCTTATCCATACC 99537 Query 281923 TGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAG 281982 | |||| | ||||| ||||| || | | | || | || | || | || || Sbjct 99538 GGCATCCTTGAGTACTTTCTCAACTGGAGCTAAAGTTGCACGGAAGTAATCAGCGCAGAG 99597 Query 281983 TTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATC 282042 |||||||||| |||||||| | | | ||| |||||||| ||||| | | ||||| Sbjct 99598 TTCTTCGAATCTAGCTCTACTGACGGCAACAGAGTAATCAATACCTTCATAGAGTGAATC 99657 Query 282043 AACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGT 282102 | ||||| |||| |||||| ||||| || | | | || ||||| |||||| || Sbjct 99658 TAACTCAATTGTAGCTTGAGTAGAAGATGACAAAGTTCTCTTTGCACGCTCACATTGAGT 99717 Query 282103 CCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATCTGT---TTTATATTTTCTCTT 282159 || ||||||| ||||||| | || | | | ||||| | | ||| |||||||| Sbjct 99718 TCTGAGTCTTCTTAAGGCTCTAGCATTTGTAGTTAAATCCATACCTCTATTCTTTCTCTT 99777 Query 282160 GAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGT 282219 |||||||| ||||| || ||||| | ||||||||||||||||| ||||| | ||| Sbjct 99778 GAAATCTTGCACACAGAATTCAACAAGTCTGTTATCAAAATCTTCACCACCCAAGTGAGT 99837 Query 282220 ATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATC 282279 || || | ||||| | |||| |||| |||||||||| || || | | ||||| Sbjct 99838 ATCACCAGCGGTAGCCTTGACTTCAAAAATACCATCTTCAATAGTTAATAATGATACATC 99897 Query 282280 ATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTC---TTGGTTT-T 282335 | || |||||||| | ||| || || | |||||| ||| | | || ||| | Sbjct 99898 AAAAGTACCACCACCTAAATCGAAGATCAATACATT----TCTCTCACCAGTTCCTTTCT 99953 Query 282336 TATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAA 282395 ||||||||||||| |||| |||||| |||||||| || ||||| ||||||| ||||| | Sbjct 99954 TATCAAGACCATAGGCAATAGCAGCTGCAGTTGGCTCGTTAATGATTCTCATTACATTCA 100013 Query 282396 GACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAG 282455 |||||||||| || ||||| || || ||||| | |||||| || || || || || | Sbjct 100014 AACCAGCAATTGCACCAGCATCCTTTGTTGCTTGACGTTGTGAGTCATTGAAGTAAGCTG 100073 Query 282456 GAACAGTAATAACGGCATCTGTTACTT---CTTTTCCAATATAAGCGCTT--GCTGTTTG 282510 ||||||||| || |||| | ||| || | | | ||| |||| | ||| Sbjct 100074 GAACAGTAACTACAGCAT-TCTTAATTGGGCGGCCCAAGTAT----GCTTCAGAGATTTC 100128 Query 282511 TTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCATT 282570 ||||| || ||| | ||| | ||||||| ||| | | | | ||| |||| Sbjct 100129 CTTCATCTTCTGTAAGACCATAGCAGAAATTTCTTCAGCATGGAACTCCTTCTTTTCACC 100188 Query 282571 TTGATA--TGATACTTCAAAATATGGTTT---ATTACCAACATTAATAACTTTAAATGGC 282625 || | | || | | || |||||| || | | ||| |||||||||||| Sbjct 100189 CAAGTAGCTCACAC-TGATGAT-TGGTTTGTCCTTTGGACCCCTAACTACTTTAAATGGC 100246 Query 282626 CAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTT 282685 || | ||||||| ||| || ||| |||| ||| | ||||||||| | || || Sbjct 100247 CAGTGAGTCATATCACTTTGTACTGCTTGATCATCAAACTTTCTACCAATAAGACGCTTA 100306 Query 282686 GCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATC 282745 |||||||||| ||||| ||| || ||| |||||| || |||||||| ||||| Sbjct 100307 GCATCAAAAACTGTATTTTCTGGGTTTCTAGCAACTTGATTCTTCGCTGCATCACCAATA 100366 Query 282746 AGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTC 282805 ||| | || || |||||||||| ||||| ||||| ||||| || |||||||||||||| Sbjct 100367 AGACGCTCAGTTTCTGTAAATGCTACATAAGATGGTGTTGTACGGTTACCTTGATCATTT 100426 Query 282806 GCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAA 282865 | || ||| || || || | ||| ||||||||| ||||| | ||||| |||||| Sbjct 100427 GGAACAATATCTACAGTATCGTTTCTCCATACACCAACACATGAGTATGTTGTACCTAAA 100486 Query 282866 TCAATACCAATAGC 282879 |||||||||||||| Sbjct 100487 TCAATACCAATAGC 100500 Score = 102 bits (112), Expect = 6e-16 Identities = 207/304 (68%), Gaps = 19/304 (6%) Strand=Plus/Plus Query 85960 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCCAATG--TTCTAAATACTC 86017 ||||||||||| || ||||| || |||| |||| | ||| || ||| ||| | | Sbjct 99812 TCAAAATCTTCACCACCCAAGTGAGTATCACCAGCGGTAGCCT-TGACTTCAAAA-ATAC 99869 Query 86018 CATTTGAGATATTCATTAACGAAACATCTAATGTCCCAGCTCCTAAGTCATAAACAATTA 86077 ||| | ||| | | ||| || ||||| || || ||| | ||||| || | | | || Sbjct 99870 CATCTTCAATAGTTAATAATGATACATCAAAAGTACCACCACCTAAATCGAAGATCAATA 99929 Query 86078 CGTTAC---CACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTG 86134 | || | |||||||| ||| || ||| | ||| || |||| ||| | Sbjct 99930 CATTTCTCTCACCAGTTCCTTTCTTA------TCA------AGACCATAGGCAATAGCAG 99977 Query 86135 CTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAA 86194 |||||||||| || ||||| ||| | | |||| ||||| |||||| | ||| ||| Sbjct 99978 CTGCAGTTGGCTCGTTAATGATTCTCATTACATTCAAACCAGCAATTGCACCAGCATCCT 100037 Query 86195 GAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTATTAA 86254 |||||||| | |||| |||||| || || ||||| ||||||| || || || |||| Sbjct 100038 TTGTTGCTTGACGTTGTGAGTCATTGAAGTAAGCTGGAACAGTAACTACAGCATTCTTAA 100097 Query 86255 TAGG 86258 | || Sbjct 100098 TTGG 100101 >seq39 Length=423162 Score = 197 bits (218), Expect = 1e-44 Identities = 457/685 (67%), Gaps = 8/685 (1%) Strand=Plus/Plus Query 282194 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 282253 || ||||| ||||||||||| | |||| || ||||| || | ||||| || Sbjct 341931 TCGAAATCCTCACCTCCCAAGTGGGTATCACCGCTTGTAGCAACGACCTCGAAAACACCG 341990 Query 282254 TCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 282313 | |||| | ||| |||| ||||||| || |||||||||| ||| | | | | | Sbjct 341991 TTATCAATGGTCAAGAGAGAAACATCAAAAGTACCACCACCCAAATCGTATACTA--AAA 342048 Query 282314 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 282373 | | |||| | ||| ||||| | ||| | |||| || || || ||||| || Sbjct 342049 TGCTCTTCTCAGCCTTC----TTATCCAAACCGAAAGCAATTGCTGCTGCTGTTGGCTCG 342104 Query 282374 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 282433 |||||||| | | ||||| | |||||||| || ||||| || || ||||| | Sbjct 342105 TTAATAATACGGATTACATTCAAGCCAGCAATAGCACCAGCATCCTTGGTAGCTTGACGC 342164 Query 282434 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATA 282493 || | || ||||| || || || |||||||| || |||| ||||||| || |||| | Sbjct 342165 TGAGCGTCATTAAAGTAAGCTGGGACAGTAATTACTGCATGCTTTACTTCCTTACCAAGA 342224 Query 282494 TAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAA 282553 ||||| || ||| ||||| || ||| | ||| | |||| | |||||||| Sbjct 342225 TAAGCCTCAGCGATTTCCTTCATCTTGACTAAGACCATAGCAGAAACCTCTTCTGGAGCT 342284 Query 282554 TATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATA 282613 ||||||| ||| | | || |||| | || ||||| | | |||||| Sbjct 342285 AATTGCTTCTTCTCACCCTTAACAGAAACTTGTATGTAAGGTTTCCCATCCCTGTTAATA 342344 Query 282614 ACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCA 282673 | || | ||||| | | || |||| |||||| | || |||||| | ||| Sbjct 342345 ATTTCATATGGCAACAAAGTCTTATCCTTTTGAACGGAATCATCCTTAAAACGACGGCCA 342404 Query 282674 ATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCT 282733 || | || ||| |||| || | ||| | |||||| | | ||||||| |||||| Sbjct 342405 ATAAGTCTCTTTACATCGAACAAAGTCTGAACTGGATTGATAGTGGCTTGATTCTTGGCT 342464 Query 282734 GCATCTCCAATCAGATGTTCTGTC-TCTGTAAATGAAACATATGATGGAGTTGTGCGATT 282792 | || ||||| | || | || || || ||||| ||||||||||| || | ||||| Sbjct 342465 GACTCACCAATTA-ATCTCTCATCATCAGTGAATGATACATATGATGGTGTAATACGATT 342523 Query 282793 ACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAA 282852 |||||| ||||| | |||||| || ||| ||||||| | | | ||| ||||| | | Sbjct 342524 ACCTTGTTCATTTGGAATAATCTCTACTCTACCATTCTTGTAGATACCAACACATGAATA 342583 Query 282853 AGTTGTTCCTAAATCAATACCAATA 282877 ||| || |||||||| ||||||||| Sbjct 342584 AGTAGTACCTAAATCGATACCAATA 342608 >seq41 Length=345200 Score = 154 bits (170), Expect = 1e-31 Identities = 341/495 (69%), Gaps = 31/495 (6%) Strand=Plus/Minus Query 281322 ATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATC--TTCAGAGAATCTTCCGCGATT 281379 |||||| ||||||||| |||||| ||||||||| | | | | ||| | ||| || Sbjct 73610 ATTCTTCAGCTTCTCTGATCATTTTCTCAATTTCAGCACTGCTAAGA--CCTCCA-GAAG 73554 Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTT---GTTGATTTATCAGCGGCAGTCACATT 281436 ||| |||||| || | | || ||| ||| ||||| || ||| |||| ||||| Sbjct 73553 ATTG--AATAGTGATCT-CGTG--TTTCTTTCCAGTTGACTTGTCAATGGCACCAACATT 73499 Query 281437 AAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGC 281496 | ||| ||||| ||||| | |||||| ||||||||||||||||| |||||||| | || Sbjct 73498 CATAATTCCATTTGCATCAATATCAAAGGTGACTTCAATTTGAGGAACCCCTCTAGGCGC 73439 Query 281497 AGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCG 281556 || || || || || | |||| ||| || ||||||||| || |||| || Sbjct 73438 TGGAGGAATTCCAATCATTTCAAATTGTCCAAGCAACTTATTATCTGCAGCAAATTCTCT 73379 Query 281557 TTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATAC 281616 ||| || | ||||| || || |||| |||||| ||||||| | ||| | ||||| Sbjct 73378 TTCTCCTTGGAAAACTTTAATTCCAACTTGAGTTTGGTTATCTGCAGCAGTGGAGAATAC 73319 Query 281617 TCTGGAT-TTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTG-GTCATAATACCA 281674 | ||| | |||||| || ||||| || ||||||| ||| | || | || | || || Sbjct 73318 T-TGGCTCTTTTTAGTGGGGATTGTAGTATTTCTATTAATTA-ATCGAGTAAAAACTCCT 73261 Query 281675 CCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT-TTTGAAG 281733 || ||||||| ||| | ||| | || || || || | || | || || |||| Sbjct 73260 CCCAAAGTTTCTATACCTAAAGATAAGGGTGTAACGTCGAGTAACAAAAGATCCTTGA-- 73203 Query 281734 TTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGC 281793 |||| || || ||| || | | ||||| |||||||| || ||||||||| Sbjct 73202 --TTTC-TCCCTT----CAA----AACACCGGCTTGTATAGCAGCTCCCATTGCAACAGC 73154 Query 281794 TTCATCAGGATTAAC 281808 ||| ||||| ||||| Sbjct 73153 TTCGTCAGGGTTAAC 73139 Score = 91.5 bits (100), Expect = 1e-12 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 86119 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 86178 |||||||| || |||||||| ||||| |||||||| ||| | |||| ||| || || Sbjct 72600 CCGTATGCCAGGGCTGCTGCTGTTGGCTCATTAATGATTCTTGTCACATTTAAGCCTGCT 72541 Query 86179 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 86238 || ||| ||| ||||||||| | ||| | |||||||| || |||||||||||| Sbjct 72540 ATAGAGCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAGGCTGGTACAGTA 72481 Query 86239 ATAACTGC 86246 ||||| || Sbjct 72480 ATAACAGC 72473 >seq49 Length=416705 Score = 111 bits (122), Expect = 1e-18 Identities = 135/183 (74%), Gaps = 1/183 (1%) Strand=Plus/Minus Query 637117 AAAATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTA 637176 ||| | ||||| |||| || || ||||| ||||| |||||||||||| | ||||| ||| Sbjct 93593 AAAGTAATTGTGGATTTCTCATCACCAAACATTGCAAAAGAAATGCATGTGGGACACTTA 93534 Query 637177 AGATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTT 637236 ||||| || || ||||| || | || ||||| || | ||| | ||| || || Sbjct 93533 AGATCTACAATCATTGGCGACACAATATGTAGAGTTCTTGAATATTTAGGATTTGAAGTA 93474 Query 637237 TATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTATATT 637296 | | |||||||| || || |||||||| |||||||| |||||| | |||| ||| || Sbjct 93473 TTAAGAATTAATCACGTTGGAGATTGGGGTACTCAATTTGGTATGCTTATTGAATAT-TT 93415 Query 637297 AAA 637299 ||| Sbjct 93414 AAA 93412 >seq14 Length=135702 Score = 107 bits (118), Expect = 1e-17 Identities = 166/236 (70%), Gaps = 12/236 (5%) Strand=Plus/Plus Query 69014 GTAAATGGTGTTGCATCGCCATACACTCCTTTAACTGCACATAGTTTTCCTAATAAACAT 69073 ||||| || ||||||||||| | || ||||| || |||||| |||||| | || |||| Sbjct 76520 GTAAAAGGAGTTGCATCGCCCTCCAATCCTTGAATTGCACACGCTTTTCCAAGTAGACAT 76579 Query 69074 TCAATAAGTTGCCCAATAGTCATACGTTTGGGCATACAATTAGGATTGATAATAATATCG 69133 ||||| | || ||||| |||||||| || ||| || |||||| || ||||| || Sbjct 76580 TCAATTAAATGACCAATTGTCATACGCGAAGGAATAGCATGAGGATTCATGATAATGTCT 76639 Query 69134 GGAATTAATCCAGATTTACTGAATAACATATCTGCTCGATGAGCTTTGTAT------CCA 69187 ||||| | |||| || | ||| |||||| ||| || | ||||| || Sbjct 76640 GGAATAATTCCATCTTGTGTAAATGGCATATC--CTC----AGTTCTGTATGTTATGCCG 76693 Query 69188 ATGGTACCTTTTTGACCTGCTCTTGACGAAAATTTATCACCTACATTGGGAATTCT 69243 || ||||| ||||| || ||| || | ||| ||||| || |||| || ||||| Sbjct 76694 ATTGTACCCTTTTGGCCATGTCTGGATGCAAACTTATCTCCAACATGAGGTATTCT 76749 >seq11 Length=225008 Score = 102 bits (112), Expect = 6e-16 Identities = 329/502 (66%), Gaps = 13/502 (3%) Strand=Plus/Plus Query 401131 TATTATGATTTCATTCACAAAGAACTTATTACTTTTTCTGTGGATGACGTTCT--TAGAT 401188 |||| |||||| ||||| ||||||||| | || || || ||| | || ||||| Sbjct 75084 TATTTTGATTTTATTCATAAAGAACTTGTA--TTATTTAGTAGATATGATACTACTAGAT 75141 Query 401189 CTGTTCCTAATTTAATGGATGGATTTAAACCATCACATCGCAAAGTATTTTATGGTTCTG 401248 || |||| |||||| | ||||| || ||||| ||| | |||||| ||| || | Sbjct 75142 CTATTCCAAATTTATTAGATGGTTTAAAACCTGGACAAAGAAAAGTACTTTTTGCAACCT 75201 Query 401249 TTGAAAAGAATATTTATAAGCAAGAGATTAAAGTATCAGATTTGACTGGTTTTGTCTC-G 401307 || |||| || || |||| || ||||||| || | || |||||| ||| | | Sbjct 75202 TTAAAAAAAAGCTTAATAATGAAC---TTAAAGTTGCACAATTAGCTGGTTATGTTGCTG 75258 Query 401308 AATATGACGAAATATCATCATGGTGATCAATCATTATCATCAACTATTGTCGGAATGGCT 401367 || || | ||||||||||| || ||||||| | || ||||| ||||| Sbjct 75259 AACATAGTGCT-TATCATCATGGAGAATCATCATTACAAAGTACAATTGTTAATATGGCA 75317 Query 401368 CAAAATTATGTGGGAAGTAACAATCTCAATTTGTTAATGCCATTGGGAATGTTTGGATCT 401427 ||||||| ||| |||||||| ||||| ||| | || ||||| || ||||| | Sbjct 75318 CAAAATTTTGTTGGAAGTAATAATCTAAATCTACTAGAGCCATGTGGTCAATTTGGTAGT 75377 Query 401428 AGATTGACCGGAGGTAAAGATTCAGCGAGTCCTAGGTATTTGAACACTAAATTAGATGAT 401487 ||| | || || |||||| || | || | ||| | |||||| || | | Sbjct 75378 AGAAAGGAAGGTGGAAAAGATGCAAGTGCTGCTCGTTATATATTTACTAAACTATCTAAA 75437 Query 401488 TTGGCAAAGAAAATCTTCATTGATTATGATTTTGATATTCTTCAAC--ATCAGTCAGAAG 401545 | | | | | || ||| || |||| | | || || ||| || || || | Sbjct 75438 TGGACTAGATATATTTTCCCAGAGGCTGATGATCCT-TTATT-AACTTATTTGTATGATG 75495 Query 401546 ATAATTGTCGAATTGAACCTGTTTATTATGCTCCTATTATTCCAATGATACTTGTAAATG 401605 || | |||||||||| | ||||| | || || ||||||||||| | ||||||| Sbjct 75496 ATGGACAACAAATTGAACCTTTATATTACGTACCAATAATTCCAATGATTTTGGTAAATG 75555 Query 401606 GAGCTGAAGGAATTGGTACTGG 401627 | |||| ||||||||||| || Sbjct 75556 GTACTGATGGAATTGGTACAGG 75577 >seq37 Length=17717 Score = 96.9 bits (106), Expect = 3e-14 Identities = 120/162 (74%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 161051 TCGAATGGATTATCAACATTGAAT-TTTTTGCGATAACCAAGATCTACAAGTAATCTGTC 161109 ||||| ||||| ||| ||| | |||||| | | ||||| | | |||||||||||| Sbjct 12626 TCGAAAGGATTGGAAACTTTGTAGATTTTTGGAACATCCAAGG-CGAAAAGTAATCTGTC 12684 Query 161110 AGCAACATATTTAATATATTGAGACATTAGTTCAGAATTCATACCAAGAAGTTTACACGG 161169 ||||||| ||| ||||||||| | ||| ||| || |||||||||| ||| | | || Sbjct 12685 AGCAACAAATTCAATATATTGGGCCATAAGTCTCGAGTTCATACCAATAAGATCAACAGG 12744 Query 161170 AAGAGAATCATTAATAAATTCTTCTTCAATTTCAATCGCTTC 161211 |||||||||| || ||| | | ||| | ||||| ||||| Sbjct 12745 AAGAGAATCACAAAGAAAGTTTCTTTCGACTTCAACAGCTTC 12786 >seq46 Length=385502 Score = 86.0 bits (94), Expect = 5e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 432287 AGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACG 432346 |||||||||||| ||| | ||||||||||||| || || | || ||| | || | | Sbjct 334695 AGGTAAAGAAGGACGTTTCAGAGGAAATTTGAGTGGTAAAAGAGTTGATTTTAGTGGAAG 334636 Query 432347 TACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTAT 432406 || |||||| || ||||||||||||||| | ||||||||| || ||| | || || Sbjct 334635 AACTGTTATTTCTCCTGATCCTAATATTGAAGTTGATGAAGTTGTGGTACCTATGATCAT 334576 Query 432407 TGCGAAAAATCTTACTT 432423 ||| || || | |||| Sbjct 334575 TGCAAAGAAATTAACTT 334559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740627601540882