Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20meleagridis_20[genbank_20GCA_5F001593445.1_202016- 03-17] 57 sequences; 8,973,200 total letters Query= NC_025829.1 Length=164999 Score E Sequences producing significant alignments: (Bits) Value seq49 86.0 7e-12 >seq49 Length=416705 Score = 86.0 bits (94), Expect = 7e-12 Identities = 213/318 (67%), Gaps = 9/318 (3%) Strand=Plus/Minus Query 60969 GTGTTTTCTACACAAAGAAACATAAATT---TCATCACCAATACAGATTTGATTACCTTC 61025 |||||||||||| | |||| |||||| | |||||||||| ||||| | || Sbjct 85346 GTGTTTTCTACATACAGAAGTATAAATGGAATTATCACCAATAAGAATTTGTTCGCCGGA 85287 Query 61026 TTTAACTGGTGTTCCATCTTCCATT-AATCGAGCTGTCATAATCGCTTTTTTACCACAAT 61084 || ||| |||| | | ||| |||| |||||| | |||||||||||||| Sbjct 85286 AAAAATAGGTTCACCAT-TACTATTTAATCTGATAGTCATAGTAGCTTTTTTACCACAGC 85228 Query 61085 GACAAACTGCTTTTAGTTCAATAAGTTTATCTGCAATCGCCAAAAGTTCTTTAGAACCTT 61144 |||||| | ||| | |||| |||||||||| || || || | | ||| |||| Sbjct 85227 GACAAATAGTTTTGATTTCAGTAAGTTTATCAGCCCATGCTAATAAGTATTTGCTTCCTT 85168 Query 61145 CAAATAATTTTCCAGCGAAATCAGTCCTTAGACCATAAGCCATA--ACAGGAACATTATA 61202 ||||||| | ||| || || || ||||||||||| |||| || |||| ||| Sbjct 85167 CAAATAAATCTCCTTTAAAGTCTGTTCTTAGACCATA--GCATAGTACTGGAATATTTAG 85110 Query 61203 TGTATCAACAATTCGGCTTAATTGATGCACCTGTTCAGTTTTTAAAAACTGGGCTTCATC 61262 | ||||||||| || ||||| ||| || || ||| || ||| |||||| Sbjct 85109 TTTATCAACAACAATGCATAATTCTCTCACTTGGGATTTTGTTAGGAATTGGCTTTCATC 85050 Query 61263 TACAAATACACAATGAAT 61280 || | ||||||| ||| Sbjct 85049 AACTAGAACACAATCAAT 85032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 527868423893480