Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20meleagridis_20[genbank_20GCA_5F001593445.1_202016- 03-17] 57 sequences; 8,973,200 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq45 100 3e-16 >seq45 Length=133594 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 35522 CTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCG 35581 ||||| || |||||||| ||| ||| ||||||||||||||||| | | ||||| | Sbjct 54822 CTCAATACTAAATGTAAGGTAGACTCTTTTTGAATGTTGTAATCAGAGAGGGTTCTACCA 54763 Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641 || || | ||||| || ||||| ||||| || || || || | |||| | ||||| Sbjct 54762 TCCTCTAATTGCTTTCCTGCAAAGATCAAACGTTGTTGATCAGGTGGAATTCCTTCCTTA 54703 Query 35642 TCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATC 35701 || |||||| ||| | | | | | || || | ||| || |||| ||||| Sbjct 54702 TCTTGAATCTTTGCCTTAACATTCTCGATAGTATCTGAAGGTTCAACTTCCAAAGTGATA 54643 Query 35702 GTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || || |||||||| || ||||| |||||||| Sbjct 54642 GTCTTTCCTGTCAAAGTCTTAACAAAAATCTGCAT 54608 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 35522 CTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCG 35581 ||||| || |||||||| ||| ||| ||||||||||||||||| | | |||| | Sbjct 55050 CTCAATACTAAATGTAAGGTAGACTCTTTTTGAATGTTGTAATCAGAGAGAGTTCTACCA 54991 Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641 || || | || || || ||||| ||||| || || || || | || | | |||||| Sbjct 54990 TCCTCTAATTGTTTTCCTGCAAAGATCAAACGTTGTTGATCAGGTGGTATCCCCTCCTTA 54931 Query 35642 TCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATC 35701 || |||||| ||| | | | | || || | || || |||| ||||| Sbjct 54930 TCTTGAATCTTTGCCTTAACGTTCTCAATTGTATCTGAAGGCTCAACTTCCAAAGTGATG 54871 Query 35702 GTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || ||||||||||| || || || |||||||| Sbjct 54870 GTCTTTCCCGTCAAAGTCTTGACGAAAATCTGCAT 54836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793278809560