Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20meleagridis_20[genbank_20GCA_5F001593445.1_202016- 03-17] 57 sequences; 8,973,200 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq6 84.2 2e-11 >seq6 Length=322908 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 111096 AAAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACC 111155 ||| |||||||||||||| ||||| | || || || ||||| || ||||| ||||| Sbjct 206853 AAAGATGCAAATTTTTGTTAAAACTCTAACAGGGAAGACCATCACATTGGAAGTTGAACC 206912 Query 111156 CAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGA 111215 ||| || ||| | ||||| ||| || || || || ||| |||| || Sbjct 206913 TTCGGATACTATTGAGAATGTAAAGGCAAAGATCCAGGATAAGGAGGGCATTCCTCCTGA 206972 Query 111216 TCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 111275 |||||| | | || | ||| || || |||||||||||| | |||| | | ||||| Sbjct 206973 TCAACAGCGTTTGATCTTTGCTGGAAAGCAATTGGAAGATGGCAGAACTCTATCTGATTA 207032 Query 111276 TAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 ||||| || || || || || | || ||||| ||| | || | ||||| Sbjct 207033 CAATATCCAGAAGGAGTCCACTTTGCACTTAGTATTGAGACTTAGAGGTGG 207083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421810906973032