Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001305335.1_202015-10- 01] 18 sequences; 9,203,314 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq13 242 1e-58 seq1 163 1e-34 seq7 152 2e-31 seq4 152 2e-31 seq9 140 1e-27 seq11 107 8e-18 seq15 89.7 2e-12 seq3 87.8 7e-12 >seq13 Length=102456 Score = 242 bits (268), Expect = 1e-58 Identities = 481/701 (69%), Gaps = 16/701 (2%) Strand=Plus/Plus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 ||| ||||| |||||| | || ||||| | |||||||| ||||| | ||| | | Sbjct 3673 AGCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAACGATAC 3732 Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTAC 451032 |||||| ||| | |||| || ||||| || || || || |||| ||| ||||| Sbjct 3733 TGTAGATATTGTTCCAAACGATCAAGGTAACCGTACAACACCATCATATGTAGCATTTAC 3792 Query 451033 GGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAA 451090 || | || | ||| | || | || || || | ||| || | ||| | || Sbjct 3793 AGAAACTGAGCGTCTTATTGGTGATGCAGCAAAGAACCAA--GTTGCTAGAAACCCAGAA 3850 Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150 || ||||| | ||||||||||||| | ||||| | | || ||||||| | | |||||| Sbjct 3851 AATACAGTTTTTGATGCTAAACGTCTTATTGGTAGAAAGTTTGATGATCAGGCAGTACAA 3910 Query 451151 AAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAA---TCAAAAAGGAAAGCCCTATATT 451207 | || | | || | | | | ||||| | || ||| | ||||| || | Sbjct 3911 AGTGATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGACAAGCCA-ATCAT 3969 Query 451208 CAA-GTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGT 451266 || ||||| || |||||||| || || | ||||||||||||| ||||||| Sbjct 3970 CAGTGTAAACTACTTAGGTGAAAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGT 4029 Query 451267 TCTTACTAAA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCC-AGTTACTGATGCA 451324 | |||| ||| ||||| || | | ||| ||| |||| || || | ||| | || Sbjct 4030 T-TTACAAAAGATGAAGGAGATCTCTGAAGCATA-CTTGGGTCGCCAAATTAAGAACGCT 4087 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 ||| |||||||||| |||||||||||||| |||| || |||||||| || |||||||| Sbjct 4088 GTAGTTACTGTTCCAGCTTATTTCAATGACTCACAGCGTCAAGCAACAAAGGATGCAGGT 4147 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 ||||||||||| ||||| | |||| ||||| || || || ||||||||| | || Sbjct 4148 GCAATTGCTGGTTTGAATGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTGCT 4207 Query 451445 TATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGT 451504 ||||| || | || |||| ||| | || | |||| | || | || ||||| ||| Sbjct 4208 TATGGTCTTGATAA---GAAAGGAACTGGCGAGAGAAATGTATTGATCTTCGATTTAGGT 4264 Query 451505 GGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCA 451564 || || ||| |||| || || | | ||||||||||| | |||||||| || || Sbjct 4265 GGTGGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTTAAAGCT 4324 Query 451565 ACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||| |||||||||||| | || ||||||||| ||||||| Sbjct 4325 ACCGCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAA 4365 >seq1 Length=1288507 Score = 163 bits (180), Expect = 1e-34 Identities = 454/690 (66%), Gaps = 15/690 (2%) Strand=Plus/Plus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 ||||| || ||| | || || || | ||||||||| ||| | ||| | ||||| | ||| Sbjct 84039 ATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAGAGTA 84098 Query 450977 GAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGAT 451036 || ||||| ||||||| ||||| || | ||| || |||| ||| || || ||| Sbjct 84099 GAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCACTGAT 84158 Query 451037 TCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAAAACA 451094 || ||| | | || || | || || ||||| | || |||| | | | | Sbjct 84159 GATGAGAGATTGATTGGTGAATCAGCCAAGAATCAA-GCTACTATCAA-TCCAGTTCAGA 84216 Query 451095 CAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAG 451154 | | | |||| || | | ||||| ||| | | | |||||| | || ||||| | Sbjct 84217 CTTTGTTCGATGTAAAGAGACTTATTGGTCGTCGCTTTAAGGATGATTCCGTCCAAAAGG 84276 Query 451155 AGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTAA 451214 | || | || | | ||||| | | || || | | ||||| || || ||||| Sbjct 84277 ATAAGACTTTGCTACCATATGAGATTATTAACAAAGATAGCAAGCCTTACATACAAGTTT 84336 Query 451215 ATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTA 451274 | ||| ||||| | || || || || ||||| ||||| ||||||| ||| | Sbjct 84337 CTGTTAAGGGTGAGAAGAAGCAATTAGCCCCAGAAGAGGTTTCAGCTATGGT-CTTGGTC 84395 Query 451275 AA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 || ||||| |||| || || ||| | ||| ||| | ||||||| |||||| Sbjct 84396 AAGATGAAGGAAATTGCTGAGGCTTATCTCGGTAAGGAAGTAAAGCATGCAGTTATTACT 84455 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || || ||||| || |||||||| || || || || || || ||||| || |||||| Sbjct 84456 GTCCCAGCTTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGTGCTATTGCC 84515 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTA 451453 ||||| ||||| |||| ||||||||||| || |||||||| || | || | ||| | Sbjct 84516 GGTTTGAATGTAATTCGTATTATTAATGAGCCAACAGCAGCAGCAATTGCTTTTGGTTTG 84575 Query 451454 GGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACT 451513 | | ||||| | || || | |||||||||| ||||| ||||| || ||| Sbjct 84576 G-------ACAAGAA--GGCTGAGAAGAGCATTTTAGTATACGATTTGGGTGGTGGTACT 84626 Query 451514 CATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGT 451573 |||| |||| | | | ||||| | || || || || || || || | |||| Sbjct 84627 TTTGATGTTTCTCTCTTGACCATTGATAACGGTGTTTTCGAGGTCGTTGCTACAAGTGGT 84686 Query 451574 GATACTCATCTAGGAGGTGAAGATATTGAT 451603 ||||| ||| | |||||||| ||| | ||| Sbjct 84687 GATACCCATTTGGGAGGTGAGGATTTCGAT 84716 Score = 120 bits (132), Expect = 1e-21 Identities = 161/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || ||||| | || || || || || || | || |||||| | || Sbjct 547744 ATGCAAATTTTTGTCAAAACTTTAACAGGAAAGACCATCACATTGGAAGTTGAACCTTCC 547685 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | | || ||| || || |||||||| || ||||||||||||||| Sbjct 547684 GATACTATTGAGAATGTAAAGGCAAAGATCCAGGATAAGGAGGGTATTCCTCCTGATCAA 547625 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || || ||| | |||||||| |||||| | | || || ||| Sbjct 547624 CAGCGTCTGATCTTTGCTGGAAAGCAATTGGAAGATGGTAGAACTCTATCTGACTACAAT 547565 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || | || |||||||||||||| ||||| Sbjct 547564 ATCCAGAAGGAGTCCACTTTGCATTTAGTATTAAGACTTAGAGG 547521 Score = 109 bits (120), Expect = 2e-18 Identities = 129/172 (75%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 412289 TTCCAAAACGACCACTTCTACCAATTCTATGTATAAAAGTTTCATGATTTTTAGGTAAAT 412348 ||||||| | |||||||| ||||||| ||| ||| | ||| | ||| |||||| || Sbjct 898550 TTCCAAATCTGCCACTTCTTCCAATTCGATGGATATATAATTCTTTATTAATAGGTAGAT 898491 Query 412349 CATAATTTATAACTAATTTAACCTCAGGAATATCTATCCCCCGTGCTAATAAATCAGTTG 412408 | || |||| |||||| || || | | | ||| || || | | | ||||||| |||| Sbjct 898490 CGTAGTTTACAACTAAGTTGACTTGTTGTACATCAATACCTCTTCCCCATAAATCTGTTG 898431 Query 412409 TTAATAAAATTCGTGTTTTTCCCTCTCTAAATTCATCTACAATTTTACTTCT 412460 | | ||||| |||||||||||| |||||||| || ||| |||| || ||||| Sbjct 898430 TAATTAAAACTCGTGTTTTTCCTTCTCTAAACTC-TCT-CAATATTTCTTCT 898381 >seq7 Length=814761 Score = 152 bits (168), Expect = 2e-31 Identities = 168/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| ||||| || |||| || || ||||| ||| | || |||||| | || Sbjct 515635 ATGCAGATTTTTGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTCA 515694 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | |||| ||| |||||||||||||||||||| || ||||||||| Sbjct 515695 GATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAAGGAATCCCACCTGATCAA 515754 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || |||| |||||| | || ||||| |||||| | | ||||| || Sbjct 515755 CAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAAC 515814 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || | |||||||| | ||||| ||||| Sbjct 515815 ATTCAAAAAGAGTCCACTTTACACTTAGTCCTGAGACTTAGAGG 515858 Score = 152 bits (168), Expect = 2e-31 Identities = 168/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||||||||| || |||| || || ||||| ||| | || ||||| | || Sbjct 515863 ATGCAGATTTTCGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAGCCTTCA 515922 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | |||| ||| |||||||||||||| ||||| || ||||||||| Sbjct 515923 GATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAGGGAATCCCACCTGATCAA 515982 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||||||||| || |||| |||||| | || ||||| |||||| | | || || || Sbjct 515983 CAACGTTTAATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGACTACAAC 516042 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || | || |||||||| ||||| ||||| Sbjct 516043 ATTCAAAAAGAGTCTACTTTACATTTAGTATTGAGACTCAGAGG 516086 Score = 116 bits (128), Expect = 1e-20 Identities = 115/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 391125 ATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTC 391184 ||||| ||| |||||||||||||||||||| || ||||||||||||||||| || || Sbjct 516678 ATTAAGGCAAAGATTCAAGATAAGGAAGGAATCCCACCTGATCAACAACGTTTGATCTTT 516737 Query 391185 TCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCA 391244 |||| |||||| | || ||||| |||||| | | ||||| || ||| | || || | Sbjct 516738 GCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAACATTCAAAAAGAGTCC 516797 Query 391245 ACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | |||||||| | ||||| ||||| Sbjct 516798 ACTTTACACTTAGTCCTGAGACTTAGAGG 516826 Score = 111 bits (122), Expect = 6e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| ||||| || |||| || || ||||| ||| | || |||||| | || Sbjct 516535 ATGCAGATTTTTGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTCA 516594 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | |||| ||| |||||||||||||||||||| || ||||||||| Sbjct 516595 GATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAAGGAATCCCACCTGATCAA 516654 Query 391170 CAACGTTTAATTTTCTCAGGGAAA 391193 |||||||| || || |||| ||| Sbjct 516655 CAACGTTTGATCTTTGCAGGAAAA 516678 >seq4 Length=1015247 Score = 152 bits (168), Expect = 2e-31 Identities = 232/330 (70%), Gaps = 9/330 (3%) Strand=Plus/Minus Query 451274 AAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 |||||||||||||| || ||| ||| ||||| || | |||| || |||||| Sbjct 773872 AAAATGAAAGAAACTGCCGAAACTTATCTTGGTAGAGGTGTAAAGCATGCTGTTATTACT 773813 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || || ||||| || |||||| | || || ||||||||||| ||||| || ||| || Sbjct 773812 GTGCCAGCTTACTTTAATGATTCTCAGCGTCAAGCAACTAAGGATGCTGGCTCTATAGCA 773753 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTA 451453 || |||||||| |||| |||||||| || |||||||| ||||| ||||| ||| | Sbjct 773752 GGCTTAAATGTAACAAGAATCATTAATGAGCCAACAGCAGCGGCTCTTGCATACGGAAT- 773694 Query 451454 GGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACT 451513 ||||| || |||| | |||| || ||| | |||||| || ||||| ||| Sbjct 773693 GGAAA--------AAGCAGATGGCAAAACAATCGCAGTTTATGATTTGGGAGGAGGTACT 773642 Query 451514 CATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGT 451573 |||| |||| | | ||| | || || |||||||| || ||||| |||||| Sbjct 773641 TTCGATATTTCTATTTTAGAGATTCTTGGCGGAGTGTTTGAAGTTAAAGCAACTAATGGT 773582 Query 451574 GATACTCATCTAGGAGGTGAAGATATTGAT 451603 | ||| |||||||| ||||| ||||| Sbjct 773581 AACACTTCCCTAGGAGGAGAAGACTTTGAT 773552 >seq9 Length=414685 Score = 140 bits (154), Expect = 1e-27 Identities = 299/443 (67%), Gaps = 9/443 (2%) Strand=Plus/Plus Query 364565 TATTCCATCTTTAGTTGATGGATTTAAACCTTCTCAAAGAAAAATTTTTTATGGAGCAAA 364624 ||||||| |||| | ||||| || |||||| ||||||||| | ||| || | || Sbjct 215927 TATTCCAAATTTATTAGATGGTTTAAAACCTGGACAAAGAAAAGTACTTTTTGCAACA-- 215984 Query 364625 TTTAAGAGGATTAGAAAAAGATCAAGTAAAAGTAGCTCAATTAGCAGGTTTTGTATCTGA 364684 ||||| | | || | || || | ||||| || |||||||| |||| ||| |||| Sbjct 215985 TTTAAAAAAAAGCTTAATA-ATGAACTTAAAGTTGCACAATTAGCTGGTTATGTTGCTGA 216043 Query 364685 CCGGGTAGCTTATCATCACGGTGAGGCAAGTTTAATGGGAGCAATAATTGGAATGGCACA 364744 | ||||||||||| || || || || | | || || ||||| || Sbjct 216044 ACATAGTGCTTATCATCATGGAGAATCATCATTGCAAAGTACTATTGTTAATATGGCTCA 216103 Query 364745 AAATTTTGTTGGAAGTAATAATGTAAATTTACTAGAACCAAAAGGACAATTTGGAAGTCG 364804 |||||||||||||||||||||| ||||| || |||||||| || |||||||| ||| | Sbjct 216104 AAATTTTGTTGGAAGTAATAATCTAAATCTATTAGAACCATGTGGTCAATTTGGTAGTAG 216163 Query 364805 AGTAATGGGAGGTAAAGATTC---TGCCAGCCCACGTTATATTTGGACCAAACTTGAAAA 364861 | | || || |||||| | ||| | |||||||| | || || || || Sbjct 216164 AAAAGAAGGTGGAAAAGATGCAAGTGC---TGCTCGTTATATATTTACTAAGCTATCTAA 216220 Query 364862 AGTGGCAGGATTAATATTTAGAAAAGAAGATAATCCAATTTTAAATTATATTAATGATGA 364921 | | | ||| || || | | | ||| |||| | |||| |||| | ||||||| Sbjct 216221 ATGGACTAGATATATTTTCCCAGAGGCTGATGATCCTTTATTAACTTATTTATATGATGA 216280 Query 364922 TGGATTAATGGTTGAACCTGAATTTTATCTTCCTATTATTCCTATGATTTTAGTAAATGG 364981 |||| | |||||||| || ||| |||| || ||||| |||||||| |||||||| Sbjct 216281 TGGACAACAAATTGAACCTTTATATTACGTTCCAATAATTCCAATGATTTTGGTAAATGG 216340 Query 364982 AGCAACAGGCATTGGTACTGGTT 365004 | || |||||||| |||| Sbjct 216341 TACTGATGGAATTGGTACAGGTT 216363 Score = 134 bits (148), Expect = 5e-26 Identities = 401/597 (67%), Gaps = 40/597 (7%) Strand=Plus/Plus Query 363743 AGGAATTCCTAAACTAGAAGATGCTAATAAAGCAGGAACAAAAGATGCTCATAAATGTGG 363802 |||||| || ||||| |||||||| || |||| || | || || | |||||| Sbjct 215117 AGGAATCCCAAAACTTGAAGATGCAAACGAAGCTGGTGGACCCCATTCTAAAAAATGTAC 215176 Query 363803 A-TTATATTTAGCAGAGGGAGATTCTGCTCT---TTCTATGATTCTGTCAGGGTTATCAA 363858 ||||| ||| | || || ||||||||| |||| || ||| |||| ||||| | Sbjct 215177 TCTTATACTTA-CTGAAGGTGATTCTGCTAAAACTTCT-TG--TCTTGCAGGATTATCTA 215232 Query 363859 GTAAAGATAGAAATTTTTATGGTGCCTTTCCGTTAAAAGGAAAATTATTAAATGTAAGAG 363918 | | |||| | | || ||| | ||||| || || ||| | |||||||| |||| Sbjct 215233 TTGTTGGTAGAGACTATTTTGGAGTATTTCCACTACGTGGTAAACTTTTAAATGTTAGAG 215292 Query 363919 AAGCATCAGTTAAACAAATTATGGGAAATGATGAGATATCAAACCTTaaaaaaaTTTTAG 363978 |||| ||| |||||||| || || |||| ||| ||| ||| || ||||| || | Sbjct 215293 AAGCTTCATTTAAACAACAAATTGGTAATGTTGAAATACAAAATATTCTTAAAATATTGG 215352 Query 363979 GATTACGTAATGAATTTAAATATGAAATGGATGAAGAATTTAATACTTTAAGATATGGAA 364038 ||||| ||| || | |||||||| | ||| | | | ||| ||||||||||| Sbjct 215353 GATTAGGTATTGGACAAAAATATGATA---ATGGACCAGTCAAT---TTAAGATATGGTT 215406 Query 364039 AAGTAATAATTTTATGTGATTCAGATGTAGATGGAAGTCATATTAAGGGACTAATTTTAA 364098 |||| | | |||| |||| ||||| ||||||||||| ||||| ||| | | Sbjct 215407 CTTTAATGCTAATGACTGATCAAGATCATGATGGTAGTCATATTAAAGGACTCATTATTA 215466 Query 364099 ATATGTTTCA-TAGTATGTGGCCTAATCT-TTTAAAAAGAGAAGGTT-TTATTACAACTA 364155 || | | || || ||| ||||| | | | || | ||| | || ||| |||| | Sbjct 215467 ATTTAATACATTATTAT-TGGCCAAGTTTAATTCATTTTAGAGGATTCTTAAAACAA-TT 215524 Query 364156 TGAACACTCCAATTGTTAAAGCAACAAAAGGA---AAAGAAATATTAAAATTTTATAATT 364212 || | ||||| ||||||||||| | ||||||| || ||||| | || | || || Sbjct 215525 TGTA-ACTCCTATTGTTAAAGCTAAAAAAGGATCTAATGAAATCT---CGTTCTTTACTT 215580 Query 364213 TAACTGATTATGATAATTGGAGAAATGATAAT------AATACAAAAGGATATTATATT- 364265 || ||| ||||| | |||||||| ||||| || ||| |||| | ||| Sbjct 215581 TATATGAATATGAACAATGGAGAAAGAATAATTCATCAAACTTAAATGGAT-GGAGATTC 215639 Query 364266 AAATATTACAAAGGATTAGGAACATCT---GATTCTAAAGAAGCTAAAGAATATTTT 364319 || ||||| ||||| ||||| |||||| || ||| ||| |||||| |||||| Sbjct 215640 AAGTATTATAAAGGTTTAGGTACATCTACAGA-TCT--TGAATTTAAAGAGTATTTT 215693 Score = 120 bits (132), Expect = 1e-21 Identities = 144/195 (74%), Gaps = 3/195 (2%) Strand=Plus/Minus Query 96115 TACTTTACTAATGTTTAATGCTGGGCTCCAGTTATTTTTTAAAATATCTAAACAAATTGC 96174 |||| | |||| |||| || ||||||||| || |||||||||||| || ||||| || Sbjct 59097 TACTGTTCTAAGAGTTAAAGCAGGGCTCCAGGCATCTTTTAAAATATCCAAGCAAATAGC 59038 Query 96175 ACCTGT---AGTACTAATATTTGGATGATAAATAGGAGTTTTAAATATAATTTTAGGAGG 96231 ||||| | || |||||| ||||| |||| || | ||| ||| ||| ||||| Sbjct 59037 TCCTGTTTGACTAGAAATATTCGGATGCCAAATTCTTGTGATGAATTTAACTTTTGGAGG 58978 Query 96232 CTTATATGGATAGTCTTCAGGAAAAGTAATTTCTAATTGGAATACTCCACCCTCATAGGG 96291 || |||||||| |||| || | | |||| || | |||||||| ||||| ||||| || Sbjct 58977 CTCGTATGGATATTCTTTTGGTACAATAATATCAAGTTGGAATATACCACCTTCATATGG 58918 Query 96292 TGTTCCTGAAGGGCC 96306 ||||||| ||| || Sbjct 58917 TGTTCCTATAGGCCC 58903 >seq11 Length=184571 Score = 107 bits (118), Expect = 8e-18 Identities = 128/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 248791 ATTTTCATTGGTCCTATGTTTTATTTGAGACTTAAACATATGGTACTTGATAAAGTTCAT 248850 ||||| |||| ||||| | ||| | | | ||||||||||| || |||||| | ||| Sbjct 45417 ATTTTTGTTGGGCCTATTTATTACCAAAAATTGAAACATATGGTTCTCGATAAAATGCAT 45476 Query 248851 TCCAGAAGTATGGGTCCTAGACAAGCTATTACTAGACAACCCATGGAAGGACGTTCTAAA 248910 | ||| | | ||||||||||||| | |||| |||||||||| |||||| | ||||| Sbjct 45477 GCAAGAGGAAGGGGTCCTAGACAAATTCTTACCAGACAACCCACTGAAGGAAGATCTAAG 45536 Query 248911 GATGGAGGTCTTAAAATTGGAGAGATGGAAAAAGATGCAATGGTTGCTCATGGA 248964 |||||||| || |||| || ||||||| |||| | || ||| ||||| Sbjct 45537 GATGGAGGACTACGTCTTGGTGAAATGGAAAGAGATTGTTTAGTAGCTTATGGA 45590 >seq15 Length=90956 Score = 89.7 bits (98), Expect = 2e-12 Identities = 168/242 (69%), Gaps = 10/242 (4%) Strand=Plus/Minus Query 420706 CCAAATGTATCAATTCCTCTTCTTCCAGCTCGTCCTGCCATTTGAAGAAATTCATCAGTT 420765 ||||| |||||||| |||||||||||||||| ||||| |||||| | ||||| | Sbjct 85603 CCAAAAGTATCAATACCTCTTCTTCCAGCTCTTCCTGACATTTGTGTATATTCAGAA--- 85547 Query 420766 CGTAAGAA-TCTTCTA---CCACAATCATCATATTTAGATAAT-CCAGTAAATACAACAG 420820 | ||||| | ||||| | |||||||||| |||| | ||||||||||| || Sbjct 85546 -GAAAGAAGTATTCTATTTTTTCGTCCATCATATTT-TTTAATACTAGTAAATACAATAG 85489 Query 420821 TTTTTGTAGGCATATTTACACCAACAGAAAAAGTTTCAGTTGCTAACAAAACTTTAATTA 420880 | | | || ||| | || | ||| | || |||||||| || || ||||| |||| Sbjct 85488 ATCTAGCTGGACAATTAATTCCCATAGATATTGTCTCAGTTGCAAATAATACTTTGATTA 85429 Query 420881 AtttttttGAATAAAGAATTTCAACAATTTCTTTTAAAATAGGAATTATACCAGAATGAT 420940 || | | | | | | || ||| |||||||| | ||| |||| || ||| ||||| Sbjct 85428 ATCCTCTAGTAAATAAGATCTCAGTCATTTCTTTGATAATTGGAAGCATTCCACTATGAT 85369 Query 420941 GA 420942 || Sbjct 85368 GA 85367 >seq3 Length=1176575 Score = 87.8 bits (96), Expect = 7e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 420714 ATCAATTCCTCTTCTTCCAGCTCGTCCTGCCATTTGAAGAAATTCATCAGTTCGTAAGAA 420773 ||||| ||||||||||| |||| || |||||||| ||| || ||| ||| || Sbjct 486509 ATCAAGACCTCTTCTTCCTGCTCTACCACTCATTTGAATAAACTCTCCAG-AGTTAACAA 486567 Query 420774 TCTTCTACCACAAT-CATCATATTTAGATAATCCAGTAAATACAACAGTTTTTGTAGGCA 420832 | | ||| | | ||||| |||| | | |||||| | ||| ||||||| ||||| Sbjct 486568 TTCTGTACTCCTTTCCATCAAATTTTCTAAGTGAAGTAAAGATAACCGTTTTTGCAGGCA 486627 Query 420833 TATTTACACCAACAGAAAAAGTTTCAGTTGCTAACAAAACTTTAATTAAtttttttGAAT 420892 | || | || | ||||||||| || || | || | |||||||| ||| | | | Sbjct 486628 TGTTAATTCCCATAGAAAAAGTCTCTGTAGAGAATAGTACTTTAATAAATGACTCTCCAA 486687 Query 420893 AAAGAATTTCAACAATTTCTTTTAAAATAGGAATTATACCAGAATGATGA 420942 |||| | ||||| ||||| |||| || ||||| || ||| ||||||| Sbjct 486688 AAAGGAGCTCAACTATTTCCTTTACAACAGGAAGTAAACCTCCATGATGA 486737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975717944349944