Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001305335.1_202015-10- 01] 18 sequences; 9,203,314 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq13 416 4e-111 seq1 239 6e-58 seq2 219 5e-52 seq9 165 1e-35 seq4 107 2e-18 >seq13 Length=102456 Score = 416 bits (460), Expect = 4e-111 Identities = 1103/1667 (66%), Gaps = 36/1667 (2%) Strand=Plus/Minus Query 6503 GTTCCTTTCATTTGATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGACCTTTTTCGCG 6562 |||||| ||| | ||| |||||| || | | ||||| ||||| | ||| | Sbjct 5317 GTTCCT--CATGTTATAGAGGTAGTTCTCCAAAGAGTTCTTAGCCTCAATCTTAAGTCTG 5260 Query 6563 TACTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCT 6622 | || ||||| ||| | || || || || ||||| | ||||| |||||| || || Sbjct 5259 TTCTGCTCATCCTCACCCTTGTATTTCTCAGCATCATTAACCATACGTTCAATATCGTCC 5200 Query 6623 TTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTA 6682 || |||||||| |||||||| || ||||| || ||||| | ||||| | |||| Sbjct 5199 TTTGATAATCTACCCTTATCGTTAGTAATAGTGATCTTGCTGCTCTTACCAGTACTCTTA 5140 Query 6683 TCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGT 6742 || ||||| |||||||| |||||||| ||||||| ||| || | || | ||||||| Sbjct 5139 TCAACAGCAGACACATTCAAGATACCATTAGCATCAATATCAAAGGTGACTTCAATTTGT 5080 Query 6743 GGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTA 6802 ||| ||| || ||||| | ||||||||| | || || | || || | | |||| Sbjct 5079 GGTACACCTCTTGGTGCTGGTGGAATACCATCAAGATGGAACTTTCCGAGGAGATGGTTA 5020 Query 6803 TCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCT 6862 ||| | | | | | ||||| ||||| |||| || || || || ||||| Sbjct 5019 TCCTTAGTCATGGCTCTCTCACCCTCATAAACTTGGATCAAGACACCACTCTGGTTATCA 4960 Query 6863 TGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACC 6922 || | ||||| |||| ||||| | ||| || || ||||| | ||||| | Sbjct 4959 GCATAAGTAGTGAAGACTTGTGTCTTCTTTGCTGGGATAGTTGTATTACGTTCAATAAGC 4900 Query 6923 GGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGT 6982 |||||||| |||||| |||||| | || || || | || | || ||||| | | Sbjct 4899 TTGGTCATAACACCACCAGCAGTTTCTAAACCGAGTGATAATGGAGCAACATCCAATAAT 4840 Query 6983 AACAGGTCTTGAACAG-ATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGC 7041 || || || || || | | | | || |||| ||||||| || ||||| || | || Sbjct 4839 AAGAGATCCTGTACGGCAGAGGATTGCT-CACCATTTAAGATAGCAGCTTGTACAGCAGC 4781 Query 7042 CCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATA 7101 || || || || || || || || || || | ||| | |||||||||||||| | Sbjct 4780 ACCATAAGCAACAGCTTCGTCTGGATTGATTGCTTTGCATGGCTCTTTACCGTTAAAGAA 4721 Query 7102 ATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTC 7161 ||| | || |||| || || || ||||| || ||||| ||||| || | || Sbjct 4720 TTCCTGAATCAAGGCCTGAACCTTTGGAATACGTGTAGAACCACCAACCAATACAACATC 4661 Query 7162 ATTCACTTTCGAT---TTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCAT 7218 || || ||| || || || | || ||| ||| || || || | | Sbjct 4660 ATGTACA---GATCTCTTGTCCATACCAGCATCCTTGAGTACTTTCTCAACTGGAGCTAA 4604 Query 7219 ACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGA---TGT 7275 | | |||||| | || || ||||| || || | || | | |||| || Sbjct 4603 AGTTGCACGGAAGTAATCAGCGCAGAGTTCTTCGAATCTAGCTCTACTGATGGCAACTGA 4544 Query 7276 ATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGA 7335 ||| ||||| || || || | ||||| | ||||| || | ||| | | || || Sbjct 4543 ATA---ATCAATACCTTCATAGAGTGAATCTAACTCAATTGTAGCTTGAGTAGAAGATGA 4487 Query 7336 TAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACC 7395 || |||| |||||| ||||| || |||| | | | | || | | || Sbjct 4486 CAAAGTTCTCTTTGCACGCTCGCATTGAGTTCTGAGTCTTCTTAAAGCTCTAGCATTTGT 4427 Query 7396 GGAAATATCTTT--CT-TATGTTTACGTTTAAACTCTT---CAGAGAAGTGTCGAAGGAG 7449 || | ||| | || ||| || | || || |||| || |||| | | | ||| Sbjct 4426 GGTTAAATCCATACCTCTATTCTTTCTCTTGAAATCTTGTACACAGAATTCT---ACGAG 4370 Query 7450 TCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAA 7509 ||| ||| |||||||||||||||||||| ||||| || ||||| ||||| |||||||| Sbjct 4369 TCTGTTATCAAAATCTTCACCACCCAAGTGAGTATCACCAGCGGTAGCTTTAACTTCAAA 4310 Query 7510 GATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAAT 7569 ||||| ||||||| |||| || || |||||||| ||||||||||| | || || || Sbjct 4309 AATACCATCTTCAATAGTTAATAATGATACATCAAAAGTACCACCACCTAAATCGAAGAT 4250 Query 7570 GAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGT 7629 | ||| || | ||| | | |||||||| ||||| || || ||||| || || || Sbjct 4249 CAATACATTTCTCTCGCCAGTTCCTTTCTTATCAAGACCATAAGCAATAGCAGCTGCAGT 4190 Query 7630 TGGTTCATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCG 7688 ||| || ||||| || | | ||| |||| |||||||| | | ||||| || || | Sbjct 4189 TGGCTCGTTAATGATTCTCATTACA-TTCAAACCAGCAATTGCACCTGCATCCTTTGTTG 4131 Query 7689 CTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCT 7748 |||| || || || || || || || || || || || || || |||| | | | || Sbjct 4130 CTTGACGCTGTGAGTCATTGAAATAAGCTGGAACAGTAACTACAGCGTTCTTAATTTGGC 4071 Query 7749 TACCGAGATACGATTCCGCGATATCTTTCAT-TTTGGTAAGAACCATCGATGAAATCTCT 7807 ||| | || | ||| | ||| || ||||| ||| |||| |||||| | ||||| ||| Sbjct 4070 GACCCAAGTATGCTTCAGAGATCTCCTTCATCTTTTGTAA-AACCATAGCAGAAATTTCT 4012 Query 7808 TCAGCCGCAAACTGTTTCGTTTCACCGTTAA--AATCAACTTCAATCATGGGTTTATCCG 7865 ||||| || | ||| ||||||| ||| | | || || || || || ||| Sbjct 4011 TCAGCATGGAATTCCTTCTTTTCACC--TAAGTAGTTTACACTGATGATTGGCTTGTCCT 3954 Query 7866 CAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCG 7925 | ||| | || ||| | | ||| | ||||||| ||| || || || Sbjct 3953 TTGGACCTCTAACTACTTTAAATGGCCAGTGAGTCATATCACTTTGTACTGCCTGATCAT 3894 Query 7926 AAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTG 7985 ||||||||| || |||||||| || |||||||||||||| |||| ||||| | || Sbjct 3893 CAAACTTTCTACCAATAAGACGTTTAGCATCAAAAACTGTATTTTCTGGGTTTCTAGCAA 3834 Query 7986 TTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACG 8045 ||||||||| || || || || |||||||| || | |||| ||||| || || || | Sbjct 3833 CTTGGTTCTTTGCTGCATCACCAATAAGACGCTC---AGTTTCTGTAAATGCTACATATG 3777 Query 8046 ATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGA 8105 |||| || || || || ||||| ||||| | || ||| ||||| |||||| ||| | Sbjct 3776 ATGGTGTTGTACGGTTACCTTGATCGTTTGGAACAATATCTACAGTATCGTTTCTCCATA 3717 Query 8106 CGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGA 8152 | || || || || || || || |||||||||||||| || ||| || Sbjct 3716 CACCAACACATGAGTATGTGGTACCTAAATCAATACCAATAGCTGGA 3670 >seq1 Length=1288507 Score = 239 bits (264), Expect = 6e-58 Identities = 803/1241 (65%), Gaps = 23/1241 (2%) Strand=Plus/Minus Query 6611 TCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTA 6670 || |||||||| | || | ||| ||||||||||| || || |||||||| ||||||||| Sbjct 85552 TCTATGTCTTCCTGTGAGAGTCTACCCTTATCATTTGTGATAGTAATCTTCTCGGATTTA 85493 Query 6671 CCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTT 6730 || | ||||||| | ||||| || | |||||||||| | ||||| || || | Sbjct 85492 CCAGTACCCTTATCCTTTGCACTAACTTGTAAAATACCATCAGTATCAATTTCAAAAGTA 85433 Query 6731 ACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCA 6790 || | |||||| || ||| || || || | ||| || || | | || ||| | ||| Sbjct 85432 ACCTCAATTTGGGGAACACCTCTTGGAGCTGGTGGGATTCCAGAAAGCTCGAATTTTCCA 85373 Query 6791 AGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCA 6850 || | | |||||||| | | | | ||| ||||| ||||| || | || || || Sbjct 85372 AGGAGATTGTTATCCTTAGTCATTGGACGCTCACCCTCATAAACCTGGATAAGTACAGCT 85313 Query 6851 GGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTT 6910 || ||||||||||| || ||| | ||| ||||| | ||||| || ||| Sbjct 85312 GGCTGATTATCTTGGTAAGTACTGAAAACTTGGCTCTTCTTGGTTGGAACAACAGTGTTT 85253 Query 6911 CTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTC 6970 || ||| | | ||||||| ||||| | ||| || | || | || | ||| || Sbjct 85252 CTACCAATGAGCTTTGTCATAACTCCACCAACAGTCTCAATACCTAAAGTTAAAGGAGTA 85193 Query 6971 ACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCT 7030 || ||||| | ||| | || | | |||||||| | |||||| | ||| Sbjct 85192 ACATCCAATAATAATAAATCACTACCG---------CCTTCACCTGCTAAGATACCAGCT 85142 Query 7031 TGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTA 7090 || || | || || || ||||| || ||||| |||||||| | | || | || || Sbjct 85141 TGTACGGCAGCACCATAAGCGACGGCTTCATCTGGGTTAATTCCTCTGTTTGGCTCCTTT 85082 Query 7091 CCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACC 7150 || | ||| | ||| | || |||||| || ||||| || || || ||||| ||| Sbjct 85081 CCATCAAAGAACTCCTTGATCAAGGCTTGAATCTTAGGGATACGAGTAGAACCACCAACC 85022 Query 7151 AAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC-TCGAAGTGTTTTTTCGAC 7209 |||||||| |||| |||| || || | ||| | || || || || || || Sbjct 85021 AAAACGATCTCATCTACTTCAGACTTTTTGATTCCAGCATCCTCCAAAACCTTCTTA-AC 84963 Query 7210 AGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAAT 7269 || || ||| || | ||||||||| | || || || || || | ||| | Sbjct 84962 TGGCTCGATAGTCTTTCTGAACAAGTCAGCATTCAACTCATCGAATTTAGCTCTGGTCAA 84903 Query 7270 GGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGT 7329 || | ||||| || | || || ||||| || | | ||||| | Sbjct 84902 GGTTTCGCTCAAATCTACATCCTCCATCAAACCTTCAATCTCGACCTTAACTTGTGGAGC 84843 Query 7330 CGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGAC-GAAGGGCACGCG 7388 ||||| | | || ||||| ||| || | || ||| | | ||||||| | | Sbjct 84842 TGAAGAAAGAGCTCTCTTTGACTTCTCG-ACCTCTCTCCTAAGCTTCTGAAGGGCTCTCT 84784 Query 7389 GGTTACCGGAAATATC-TTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGG 7447 || | | ||| |||| | | ||| || | |||| | | ||||| | Sbjct 84783 TGTCAGACTTTACATCCTTTCCTGTCTTTGACTTGATGATCTTGATA-AAGTGGTCCATA 84725 Query 7448 AGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCA 7507 | |||| ||||||||| ||||| ||||| || ||||| || || || ||| || Sbjct 84724 ACTCTCTGATCGAAATCCTCACCTCCCAAATGGGTATCACCACTTGTAGCAACGACCTCG 84665 Query 7508 AAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAA 7567 || | ||| |||||| | || | ||||||||||| ||||||||||||| || | Sbjct 84664 AAAACACCGTTATCAATGGTCAAGAGAGAAACATCAAAAGTACCACCACCCAAATCGTAT 84605 Query 7568 ATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCC 7627 | | | | || | || | | |||| || | ||| | || || || || || Sbjct 84604 ACTAAAATGCTCTTCTCAGCCT------TCTTGTCCAAACCAAAAGCAATTGCTGCTGCT 84551 Query 7628 GTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGT 7686 ||||| |||||||||||||||| ||| |||| || ||||||| | ||||| || || Sbjct 84550 GTTGGCTCATTAATAATACGAATTACA-TTCAAACCGGCAATAGCACCAGCATCCTTGGT 84492 Query 7687 CGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTT 7746 || || || || | ||| |||||||| || ||||| || | || || | | | |||| Sbjct 84491 AGCCTGACGCTGAGCATCATTAAAGTAAGCTGGGACAGTAATAACTGCATGCTTTACTTC 84432 Query 7747 CTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTC 7806 |||||||||||| | || || || || ||||| ||| | ||||| | ||||| ||| Sbjct 84431 CTTACCGAGATAAGCCTCAGCAATTTCCTTCATCTTGACCAAGACCATAGCTGAAACCTC 84372 Query 7807 TTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTT 7847 ||| | || || || ||| | ||||| |||| | ||||| Sbjct 84371 TTCTGGGGCTAATTGCTTCTTCTCACCCTTAACAGAAACTT 84331 >seq2 Length=1262744 Score = 219 bits (242), Expect = 5e-52 Identities = 1152/1822 (63%), Gaps = 43/1822 (2%) Strand=Plus/Minus Query 104368 TAATACATACCCGTTTTTAAACCAGTTTTCCACGCGTACATGTGCATAGACGAAAGTTTT 104427 ||||| || || ||||||| ||| ||||||| | || | |||||||| || | ||| Sbjct 371593 TAATAAATGCCTGTTTTTAGACCTTTTTTCCAACCATAAAAATGCATAGATGATAACTTT 371534 Query 104428 GAAATTGTTGGACTCTCGAC--GAATAAGTTCATACTTTGACTTTGGTCTATATACACAC 104485 | || | | | | || | |||| ||||| | ||| ||| | ||| || Sbjct 371533 GCAAAGTTAGCATTTTCCATATGAAT--GTTCAAAGATTGCGATTGACAAACATATGGAC 371476 Query 104486 CTCTATCCGCCGCCATATCGATGATTGTTTTTTGACTCATTTCCCATACGGTTTTATACA 104545 | ||||| || |||||||| || | ||| ||||| | ||||||||||| || ||||| | Sbjct 371475 CCCTATCTGCAGCCATATCAATTACTGTCTTTTGCTTAATTTCCCATACAGTCTTATAAA 371416 Query 104546 ATTCCTTAAGATCATCGGGTATATCAATAATGTTTTGAACAGACCCATTTGCCTTCACCA 104605 || | ||| || || || || || ||||||| ||||| || | | Sbjct 371415 GCTCGCGTATATCTTCCGGAATTGTAAGTATATTTTGAATGCTGCCATTA---TTTGCAA 371359 Query 104606 TAAGATCTTTCATTT-CCTTCGA--CCAGAGTCCACGTTCTTTCAAATCGTTTACTAAAT 104662 ||| || | | | ||| | ||| | ||| | ||| ||||| |||| |||| Sbjct 371358 TAATATTCTGCTTAAGCCTATCATCCCATAACCCAAGCTCTAGTAAATCATTTAGCAAAT 371299 Query 104663 GTTTGTTTACGACGACAAATTCACCCGCGAGTGTTCGTCTCAAATAGATATTGGTCGTAT 104722 | ||||| || | || ||||| | ||| || | ||| || || | ||| Sbjct 371298 GCGGATTTACTACAAAGAACTCACCAGATAGTACTCTACGATGATAAATGTTCGAGGTAA 371239 Query 104723 ACGGTTCGAAACACTCGTTGTTCCCTAAAATCTGGGATGTGGATGCGGTAGGCATAGGTG 104782 | || || |||| ||| ||||| |||||||| || || |||||||| || ||||| || | Sbjct 371238 ATGGCTCAAAACTCTCATTGTTACCTAAAATTTGCGAAGTGGATGCTGTTGGCATTGGAG 371179 Query 104783 CAAGAAGAAGACTATTCATAGTTCCTTTCTTAACAAG------TTTACGCATGGCATTCC 104836 | | ||| ||| | | || | || || |||| ||| || || Sbjct 371178 ATATTAATAGAGAATTACGAATACCATGTTTGGAAATCCTATCTTTAAGCAA---ATCCC 371122 Query 104837 AATCGTATCGACCACTAAACTTTGG-GT--CTCGATCCCACATATCGAATTGAAGAATAC 104893 |||| | | ||| | | ||| || ||| |||||||||| ||||| | ||||| Sbjct 371121 AATCACAAAGTCCAG---AGTCTGGTGTAACTC---CCCACATATCAAATTGTAAAATAC 371068 Query 104894 CTTTACTAAACGGTGACCCCTTAAACGTTTCATAAGGACCGTACATTTCGGCAAGTTCAC 104953 | ||||| || || || | | ||||| || || ||||| |||| ||||| |||| Sbjct 371067 CCTTACTCGCAGGCGAACCGGAATATGTTTCGTATGGCCCGTATTTTTCTGCAAGCTCAC 371008 Query 104954 ACGACGATTCGAGTGATGCGTGGTAGATAGTTTCGAATATATCAATGTTGAGTTTTCTCG 105013 | | ||||| | ||| | |||||| ||| || || | | || | || | | Sbjct 371007 AGCTAGCGTCGAGAGCTGCATAATAGATAACTTCAAAAATTTGTTTATTTAACTTCTTAG 370948 Query 105014 ATTCTTCTGAACCGAATGTCATTCTTAACATGATAAACACGTCAGCGAGACCCTGAACAC 105073 | | || || || | | ||| | | ||| ||||| ||| ||||| || |||| | Sbjct 370947 CTCCCTCAGACTCGTACGGCATACGAAGCATCATAAAACAGTCTGCGAGCCCTTGAATGC 370888 Query 105074 CAATACCGATGGGTCTGTGACGCATATTTGAACGTTTCCCGTTTTCGGTTGGGTAAAAGT 105133 |||| || | || | || | | ||| || ||| | | || | | ||| | Sbjct 370887 CAATCCCCAATGGACGATGTCTTAAATTCGATTTTTTACACTCTTTGAGAGAATAATATC 370828 Query 105134 TTTTATCAATAACCTTGTTTAAGTTACGTGTAACCATTTTCGTAACACGATGTAACTCTT 105193 ||||| | || || || || | |||| || |||||||| | ||||| | Sbjct 370827 CAACGTCAATCAATTTATTCAAATTCCTCGTAATCACCTTCGTAACTTCTTTTAACTTAT 370768 Query 105194 CATGGTTAAACTCGTTCTTCTCGACATCAACGTATTTTGGTAACGCGATTGATGCGAGAT 105253 || | |||| || || | ||||||| ||||||| | | || || || |||| Sbjct 370767 CAAAATCAAACGTCTTGTTATTTTTATCAACGAATTTTGGAAGGCCAATAGACGCCAGAT 370708 Query 105254 TACATACGGCGGTTTCTTCCTTATCCGTAAACTCCAGAATTTCTGTACACAAATTTGATG 105313 |||| ||||| ||| ||| | || | || | |||||||| || || || || Sbjct 370707 TACAGACGGCAACTTCGTCCGTGCTAGTGTATTCTATGATTTCTGTGCATAAGTTACTTG 370648 Query 105314 ATTTAATCGTACCAACGTGTTTATGGTTCGACTTTTC--ATTACACGCGTCTTTGTAAAG 105371 | ||| || || | | ||| ||||| |||||| ||| || ||||| ||| Sbjct 370647 AAACAATAGTTCCCAAATTTTTCTGGTT--ACTTTTGCTATTTGCAGCATCTTTATAACA 370590 Query 105372 CATATATGGGGTTCCCGTTTCACTTTGGGATTTAATAATTGCTTTCCAAATCTCCGAAGC 105431 ||| |||| || ||||| ||| |||| | | | ||| ||||| | | || Sbjct 370589 AATAAATGGTGTCCCCGTCTCAATTTGAGCCTGTAAGATTAAGAACCAAAGTTTCTGCGC 370530 Query 105432 TGGTACAAC--TTTAGTTGCGATACCTTCAGATTCGTATTTCTCGTAAAGATCTTCAAAC 105489 | | || | ||| || | |||| || || | || || || | | ||| Sbjct 370529 T--TTCATCGTTTTCCTTCCACGGCCTTGTTTCTCATACTCTTCATATAGCTTCTTAAAA 370472 Query 105490 TCTTTACCGTACACGTCT-GAAAGACCCTTTGCCTG-ATCAGGACAAAACAATGACCAAT 105547 || | || | || ||| | || |||| || | ||| || || | | | ||||| Sbjct 370471 TCATCGCCCCAAACATCTTGCAATCCCCT--GCATTCATCTGGGCACATTAGAGTCCAAT 370414 Query 105548 TACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAAGAGGT 105607 ||| ||||| | || |||||||| ||| |||| ||| | ||| | |||||| | Sbjct 370413 CTTGATCCTTCTCAACTCTTTCCATGAACAGATCAGGAACCCAAAGGGCAGGAAAGAGAT 370354 Query 105608 CTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATAT 105667 | ||||| ||| |||||| | || |||||| | ||||| | ||| || | || || Sbjct 370353 CGCGACATCTCATCTCTTCCTTTCCGTGATTCTTCCTGATTTCAATAAACTCTACAACAT 370294 Query 105668 CGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCTTTACGACGCCCCGC---TTGAT 105724 | ||||||| || || ||||| | |||||| | |||||||| ||| | ||||| Sbjct 370293 CAACGTGCCACGGCTCCAAATAAATTGCAATGGCACCTTTACGCTTCCCTCCACCTTGAT 370234 Query 105725 TGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGATGTTC 105784 | ||| || || || ||||| || || | ||| ||||| | |||| ||| | | Sbjct 370233 CAATATACCTAGCAGTGTCATTATAAACGCGCAGCATCGGAATTAATCCATTAGATCTCC 370174 Query 105785 CATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCAATAC 105844 |||||||||| ||||||| ||| | || | | | || || | ||||| || Sbjct 370173 CATTTGTTCCTCGAATATATGAACCAGTTCCTCTAATATTACTCACTGCCACCCCAAGAC 370114 Query 105845 CCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATAC 105904 | || || |||||| || || || | ||| ||| || | ||||||| || Sbjct 370113 CACCCGCAGTCTTACTAATGTTTGCGCATTTAGTTAGTGTGTCAAAGATACCGTTTATTG 370054 Query 105905 TATCTTCCTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTGGGTGTACCAGCAT 105964 |||||| | || | | ||||| ||||||||||| |||| || || || | || Sbjct 370053 AATCTTCTGGAATCCTGAGTAAAAAACAAGATGACATTTGAGGTCGTGGAGTGCCTGAAT 369994 Query 105965 TGAACAGAGTTGGTGTTGCATGAATGAACAAACCTTTCGATAACGCTTCGTATGTTTCCA 106024 | || || || |||||||||||| | || | || ||||||| || |||||||| | Sbjct 369993 TAAAGAGTGTGGGTGTTGCATGAGTAAAATATTTTTGCGATAACAACTCATATGTTTCAA 369934 Query 106025 GGACGTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCATATAGAGATATTGGG 106084 | | |||||||| | |||||||||| || ||| ||||| |||| ||| | Sbjct 369933 GTGCAGCTTCAATATCACCACAATGAATACCACAAGAGACCCGCATCAGAAGATGTTGTG 369874 Query 106085 GTGTTTCAATAATTTCACCGTCAATTTTCTGGAGATACCCTTTTTCAAGTGTTTTTAAAC 106144 || |||| | || || ||||||||| | ||||| | |||| || ||||| || Sbjct 369873 GTCTTTCCACAACTTTGTTGTCAATTTTAAGAAGATAGGATCTTTCTAGAGTTTTGAAGG 369814 Query 106145 CAAAATACCCAAACTCAAAATC 106166 ||||||| | | |||||||| Sbjct 369813 CAAAATAATCGTATTCAAAATC 369792 Score = 91.5 bits (100), Expect = 2e-13 Identities = 168/241 (70%), Gaps = 9/241 (4%) Strand=Plus/Plus Query 11445 TTTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACG--GTTGATTTTCACGT 11502 |||||| |||| |||||||||||||| ||||| | ||||| | | | ||||| | | Sbjct 481250 TTTCTT-CCAACTGCATCAATTTCATCAATAAAAACAATACTTGGAGATAATTTT--CTT 481306 Query 11503 GCCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAAC 11562 ||| | ||||| || | ||||| |||| || | || ||||| || |||| || Sbjct 481307 GCCTGTGAAAATAATTCTCTTACTCTACTTGCACCCATTCCAACAAAAATCTCAATAAA- 481365 Query 11563 GATGAC--CCCGAACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTA 11620 || || || || | || ||| || || || |||||| || | ||| ||| | Sbjct 481366 -ATCACTTCCAGATATATAAAAAAATGGTACATTAGCTTCACCAGCAACAGCTTTTGCCA 481424 Query 11621 AAAGTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCAC 11680 | | ||||||||| ||||||||| ||| ||||| ||||| |||||||||| |||| Sbjct 481425 ATAATGTTTTACCGGTACCTGGTGGTCCTACCAATAAAGCACCTTTTGGTATTTTTGCAC 481484 Query 11681 C 11681 | Sbjct 481485 C 481485 >seq9 Length=414685 Score = 165 bits (182), Expect = 1e-35 Identities = 338/499 (68%), Gaps = 9/499 (2%) Strand=Plus/Minus Query 183161 CCGGTACCAATACCTTCAGTTCCATTTACCAAAACGGTCGGTAATATAGGAACATAATAG 183220 || |||||||| || ||||| ||||||||||||| | || | ||| ||||| ||||| Sbjct 216361 CCTGTACCAATTCCATCAGTACCATTTACCAAAATCATTGGAATTATTGGAACGTAATAT 216302 Query 183221 TCAGGTTCGATTTGTTTACCGTCGTCGTCGAGATAGTTTAATACTGGATCATC----TTT 183276 |||||| ||||||| || || || | | ||| |||||| |||||||| | | Sbjct 216301 AAAGGTTCAATTTGTTGTCCATCATCATATAAATAAGTTAATAAAGGATCATCAGCCTCT 216242 Query 183277 GGGATCAAAAAGTATTCTCGCGTTTTTAGTCAATTTTGTAAATATATACCTGGTTTGACT 183336 |||| ||| ||| || | ||||| | || ||||||||||| | | ||| Sbjct 216241 GGGA---AAATATAT-CTAGTCCATTTAGATAGCTTAGTAAATATATAACGAGCAGCACT 216186 Query 183337 CGCGTCTTTACCACCCATGAGACGTGTACCAAATTGACCACATGGTTCGAGTAAATTAAT 183396 || ||||| ||||| | |||||||||||||||||||||| | || ||| | Sbjct 216185 TGCATCTTTTCCACCTTCTTTTCTACTACCAAATTGACCACATGGTTCTAATAGATTTAG 216126 Query 183397 ATTATTCGACCCCGTAAAATTATGTGCTAATTTTACAATTGTATCTGCCAAAGAGACTTC 183456 |||||| || |||||| || || | || ||||| ||| | ||| || ||| Sbjct 216125 ATTATTACTTCCAACAAAATTTTGAGCCATATTAACAATAGTACTTTGCAATGATGATTC 216066 Query 183457 ACCGTGGTGATACGATGTTTTTTCCGAAACGTATGCGGCTAATTGCGCAACCTTCATTTC 183516 || || ||||| | | | ||| | ||| || | |||||||| ||||| || | ||| Sbjct 216065 TCCATGATGATAAGCACTATGTTCAGCAACATAACCAGCTAATTGTGCAACTTTAAGTTC 216006 Query 183517 AGATGTAAGATTCTTTGTGAAACACGCGTATAACACTTTTCGTTGGGATGGTTTTAAACC 183576 | |||| || ||| | || || | | ||||||| ||| ||||||||||| Sbjct 216005 ATTATTAAGCTTTTTTTTAAATGTTGCAAAAAGTACTTTTCTTTGTCCAGGTTTTAAACC 215946 Query 183577 ATCTGAAACGTGTGCAATCGACCTTTTCAAATCAGCAAGACTGAAATTTACAAGATCTTT 183636 |||| | | | || ||| || || | |||| ||| || |||||| ||||| Sbjct 215945 ATCTAATAAATTTGGAATAGATCTAGTAGTATCATATCTACTAAATAATACAAGTTCTTT 215886 Query 183637 ATGAATAAAATCAGAAATA 183655 ||||||||||||| ||||| Sbjct 215885 ATGAATAAAATCA-AAATA 215868 >seq4 Length=1015247 Score = 107 bits (118), Expect = 2e-18 Identities = 210/303 (69%), Gaps = 13/303 (4%) Strand=Plus/Plus Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 |||| ||||||| ||| ||||||||||||| ||| || | || | |||||| | ||| Sbjct 772788 GCACCAACATTCATAATTCCATTTGCATCAATATCAAAGGTGACTTCAATTTGAG--GTA 772845 Query 6749 CCCCTC--GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCG 6806 |||||| ||||| | ||||| ||| | | |||||| ||||| || | ||||| | Sbjct 772846 CCCCTCTGGGTGCTGGAGGAATTCCCATCATTTCAAATTGTCCAAGCAACTTATTATCAG 772905 Query 6807 TCGC--CTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTG 6864 || |||| | ||| |||| | ||||||||| || || |||||| ||| Sbjct 772906 CAGCAAATTCT--CTTTCTCCTTGGAAAACTTTAATTCCAACTTGAGTTTGATTGTCTGC 772963 Query 6865 TGCCGTTGAGAAGA-TTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCG 6923 || || ||||| | || | ||||| |||| || || || |||||||| ||| | Sbjct 772964 AGCAGTGGAGAATACTTGGCTCTTT-TTAGTAGGTATTGTGGTATTTCTGTTAATTAATC 773022 Query 6924 GGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTA 6983 | || | || ||||||| |||||| | || | ||| | ||||| ||||| ||||| Sbjct 773023 GAGTAAAAACTCCACCCAAAGTTTCAATACCTAAAGATAAGGGTGTAACGTC---GAGTA 773079 Query 6984 ACA 6986 ||| Sbjct 773080 ACA 773082 Score = 86.0 bits (94), Expect = 8e-12 Identities = 197/291 (68%), Gaps = 8/291 (3%) Strand=Plus/Plus Query 7493 GTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCA 7552 || ||||| |||||||| | || || ||| | ||| | |||| ||| || ||||| Sbjct 773589 GTTGCTTTAACTTCAAACACTCCGCCAAGAATCTCTAAAATAGAAATATCGAAAGTACCT 773648 Query 7553 CCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTAC 7612 || |||| ||| ||| | || | || | | | ||| | | || || | ||||| Sbjct 773649 CCTCCCAAATCATAAAC---TGCGATTGTTTTGCCATCT--GCTTTT-TCCATTCCGTAT 773702 Query 7613 GCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGT 7671 || | |||||| || ||||| |||||||| || | ||| || || || || |||| Sbjct 773703 GCAAGAGCCGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAG-CCTGCTATAGA 773761 Query 7672 TGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGAC 7731 | ||||| || || ||||| || || ||||| |||||||| || || || || | || Sbjct 773762 GCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTAATAAC 773821 Query 7732 CGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTT 7782 || | | | || |||| ||||| | ||| || | ||||||||||| Sbjct 773822 AGCATGCTTTACACCTCTACCAAGATAAGTTTCGGCAGTTTCTTTCATTTT 773872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132657095120