Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001305415.1_202015-10- 01] 18 sequences; 9,001,535 total letters Query= NC_012740.1 Length=166418 Score E Sequences producing significant alignments: (Bits) Value seq10 89.7 5e-13 >seq10 Length=178539 Score = 89.7 bits (98), Expect = 5e-13 Identities = 113/153 (74%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 50612 CATTGTTGCTTTCTTGCCACAATGACAAATACCCTTCATTTCGACCAGTTTATCAGCAAA 50671 ||| || ||||| |||||||| |||||||| || ||||| ||||||||||| | Sbjct 161719 CATGGTAGCTTTTTTGCCACAGCGACAAATAGTTTTGATTTCAGTAAGTTTATCAGCCCA 161778 Query 50672 TGCCATTAATGCCGCAGATCCTTCAAATAGATTGCCCTGAAAGTCAGTGCGAAGGCCATA 50731 ||| | ||| | ||||||||||| ||| |||| |||||| || | | ||||| Sbjct 161779 TGCTAATAAGTATTTACTTCCTTCAAATAAATTTCCCTTAAAGTCTGTTCTCAAACCATA 161838 Query 50732 GCACAGTACAGGGATA-TTAGCATCATCAACAA 50763 ||| ||||| || ||| ||||| | |||||||| Sbjct 161839 GCATAGTACTGGAATATTTAGC-TTATCAACAA 161870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532409480207840