Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001305415.1_202015-10- 01] 18 sequences; 9,001,535 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq12 556 1e-152 seq1 260 1e-63 seq4 147 2e-29 seq2 114 1e-19 seq10 105 5e-17 seq9 105 5e-17 >seq12 Length=162451 Score = 556 bits (616), Expect = 1e-152 Identities = 1078/1571 (69%), Gaps = 34/1571 (2%) Strand=Plus/Minus Query 517162 AGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAAT 517221 ||| || ||| ||| | ||||| | || | || ||||| || || |||||||| Sbjct 149304 AGCATCATTAACCATACGTTCAATATCGTCCTTTGATAATCTACCCTTATCGTTAGTAAT 149245 Query 517222 AGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATT 517281 ||| || || || || || |||||| | |||| |||||| | |||||||| Sbjct 149244 AGTGATCTTGCTGCTCTTACCAGTACTCTTATCAACAGCAGACACATTCAAGATACCATT 149185 Query 517282 GGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCC 517341 ||||| | |||||| |||||||||||||| || || ||||| | || ||||| || || Sbjct 149184 AGCATCAATATCAAAGGTGACTTCAATTTGTGGTACACCTCTTGGTGCTGGTGGAATACC 149125 Query 517342 TTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAA 517401 || | || || |||| || || ||||| ||||| | || |||||||| | Sbjct 149124 ATCAAGATGGAACTTTCCGAGGAGATGGTTATCCTTAGTCATGGCTCTCTCACCCTCATA 149065 Query 517402 AATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTC-TGGATTTTT 517460 || |||||| || || | || ||||| | |||||| || || ||| || || || Sbjct 149064 AACTTGGATCAAGACACCACTCTGGTTATCAGCATAAGTAGTGAAGACTTGTGTCTTCTT 149005 Query 517461 TACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTA 517520 | | ||| | ||||| || | ||||||| |||||||||| |||||| || ||||||| Sbjct 149004 TGCTGGGA-TAGTTGTATTACGTTCAATAAGCTTGGTCATAACACCACCAGCAGTTTCTA 148946 Query 517521 AACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTT 517580 |||| || || | |||| ||||| | || | | || || | || | || Sbjct 148945 AACCGAGTGATAATGGAGCAACATCCAATAATAAGAGATCCTGTACGG---CAGAGGATT 148889 Query 517581 GACCAACA---AGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGAT 517637 | || || | ||||| ||||| | |||||||||||| ||||||||||| || |||| Sbjct 148888 GCTCACCATTTAAGATAGCAGCTTGTACAGCAGCACCATAAGCAACAGCTTCGTCTGGAT 148829 Query 517638 TAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT--TGAAAGAAGTTGTCTTA-CCT 517694 | | | || | | | |||||| || ||| |||| |||| ||| | || | ||| Sbjct 148828 TGATTGCTTTGCATGGCTCTTTACCGTT-AAAGAATTCCTGAATCAAG--GCCTGAACCT 148772 Query 517695 TAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTT 517754 | |||||||| | || || ||||| ||||||| ||||| || | || |||| Sbjct 148771 TTGGAATACGTGTAGAACCACCAACCAATACAACATCATGTACAGATCTCTTGTCCATAC 148712 Query 517755 TTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAA 517814 | |||| | ||||| ||||| || | | | || | || | || | || | Sbjct 148711 CAGCATCCTTGAGTACTTTCTCAACTGGAGCTAAAGTTGCACGGAAGTAATCAGCGCAGA 148652 Query 517815 GTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAAT 517874 ||||||||||| |||||||| | | | || ||||||||| ||||| | | |||| Sbjct 148651 GTTCTTCGAATCTAGCTCTACTGATGGCAACTGAATAATCAATACCTTCATAGAGTGAAT 148592 Query 517875 CAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTG 517934 | | ||||| |||| |||||| ||||| || | | | || ||||| || ||| | Sbjct 148591 CTAACTCAATTGTAGCTTGAGTAGAAGATGACAAAGTTCTCTTTGCACGCTCGCATTGAG 148532 Query 517935 TCCTTAGTCTTCGTAAGGCTTTTGCTGAT-TGATTCAAATCTGT---TTTATATTTTCTC 517990 | || ||||||| ||| ||| | || | || || ||||| | | ||| |||||| Sbjct 148531 TTCTGAGTCTTCTTAAAGCTCTAGCATTTGTGGTT-AAATCCATACCTCTATTCTTTCTC 148473 Query 517991 TTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTA 518050 |||||||||| ||||| || ||| || | ||||||||||||||||| ||||| | | Sbjct 148472 TTGAAATCTTGTACACAGAATTCTACGAGTCTGTTATCAAAATCTTCACCACCCAAGTGA 148413 Query 518051 GTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACA 518110 |||| || | |||||| | |||| |||| |||||||||| || || | | |||| Sbjct 148412 GTATCACCAGCGGTAGCTTTAACTTCAAAAATACCATCTTCAATAGTTAATAATGATACA 148353 Query 518111 TCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTC--TTGGTTT- 518167 ||| || |||||||| | ||| || || | |||||| | || | | || ||| Sbjct 148352 TCAAAAGTACCACCACCTAAATCGAAGATCAATACATTTCTCTC---GCCAGTTCCTTTC 148296 Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 |||||||||||||| |||| |||||| |||||||| || ||||| ||||||| ||||| Sbjct 148295 TTATCAAGACCATAAGCAATAGCAGCTGCAGTTGGCTCGTTAATGATTCTCATTACATTC 148236 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 | |||||||||| |||||||| || || ||||| | ||||| || || ||||| || Sbjct 148235 AAACCAGCAATTGCACCTGCATCCTTTGTTGCTTGACGCTGTGAGTCATTGAAATAAGCT 148176 Query 518288 GGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTC 518347 |||||||||| || || | | | || ||| | || || | | | ||| Sbjct 148175 GGAACAGTAACTACAGCGTTCTTAATTTGGCGACCCAAGTATGCTTCAGAGATCTCCTTC 148116 Query 518348 ATTTTACTTAAAATCATTGATGAAATTTGTTCTG--GGGAATATTGCTTGGATTCATTTT 518405 || || ||||| ||| | ||||||| ||| | ||| ||| ||| |||| | Sbjct 148115 ATCTTTTGTAAAACCATAGCAGAAATTTCTTCAGCATGGA--ATTCCTTCTTTTCACCTA 148058 Query 518406 GATATGATAC-TTCAAAATATGGTTT---ATTACCAACATTAATAACTTTAAATGGCCAG 518461 || ||| | | || ||| || || | | ||| ||||||||||||||| Sbjct 148057 AGTAGTTTACACTGATGAT-TGGCTTGTCCTTTGGACCTCTAACTACTTTAAATGGCCAG 147999 Query 518462 TATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCA 518521 | ||||||| ||| || || |||| ||| | ||||||||| | ||||| ||| Sbjct 147998 TGAGTCATATCACTTTGTACTGCCTGATCATCAAACTTTCTACCAATAAGACGTTTAGCA 147939 Query 518522 TCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGA 518581 ||||||| ||||| ||| || | ||| |||| | || |||||||| ||||| ||| Sbjct 147938 TCAAAAACTGTATTTTCTGGGTTTCTAGCAACTTGGTTCTTTGCTGCATCACCAATAAGA 147879 Query 518582 TGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCA 518641 | || || |||||||||| ||||||||||| ||||| || ||||||||||| || | | Sbjct 147878 CGCTCAGTTTCTGTAAATGCTACATATGATGGTGTTGTACGGTTACCTTGATCGTTTGGA 147819 Query 518642 ATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCA 518701 | ||| || || || | ||| ||||||||| ||||| | || || ||||||||| Sbjct 147818 ACAATATCTACAGTATCGTTTCTCCATACACCAACACATGAGTATGTGGTACCTAAATCA 147759 Query 518702 ATACCAATAGC 518712 ||||||||||| Sbjct 147758 ATACCAATAGC 147748 Score = 105 bits (116), Expect = 5e-17 Identities = 205/300 (68%), Gaps = 17/300 (6%) Strand=Plus/Minus Query 322085 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCTA-ATGTTCTAAATACTCC 322143 ||||||||||| || ||||| || |||| |||| | ||| | ||| ||| | || Sbjct 148436 TCAAAATCTTCACCACCCAAGTGAGTATCACCAGCGGTAGCTTTAACTTCAAAA-ATACC 148378 Query 322144 ATTTGAGATATTCATTAACGAAACATCTAAAGTCCCAGCTCCTAAGTCATAAACAATTAC 322203 || | ||| | | ||| || ||||| ||||| ||| | ||||| || | | | ||| Sbjct 148377 ATCTTCAATAGTTAATAATGATACATCAAAAGTACCACCACCTAAATCGAAGATCAATAC 148318 Query 322204 GTTAC---CACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGC 322260 || | | |||||| ||| || ||| | ||| || |||| ||| || Sbjct 148317 ATTTCTCTCGCCAGTTCCTTTCTTA------TCA------AGACCATAAGCAATAGCAGC 148270 Query 322261 TGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAG 322320 ||||||||| || ||||| ||| | | |||| ||||| |||||| | | | ||| Sbjct 148269 TGCAGTTGGCTCGTTAATGATTCTCATTACATTCAAACCAGCAATTGCACCTGCATCCTT 148210 Query 322321 AGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTATTAAT 322380 |||||||| | ||||| |||||| ||||| ||||| ||||||| || || || ||||| Sbjct 148209 TGTTGCTTGACGCTGTGAGTCATTGAAATAAGCTGGAACAGTAACTACAGCGTTCTTAAT 148150 >seq1 Length=1283549 Score = 260 bits (288), Expect = 1e-63 Identities = 1026/1587 (65%), Gaps = 45/1587 (3%) Strand=Plus/Minus Query 517139 TTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAG 517198 || ||| |||| |||||| | ||| || ||||||| | ||| || | || | ||| Sbjct 83797 TTGTCTTCTTCGGCAAATTGCTCAGCCTCCTTAATCATACGCTCTATGTCTTCCTGTGAG 83738 Query 517199 AATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCG 517258 | ||| || || ||| || |||||||| |||| ||||| || ||||| Sbjct 83737 AGTCTACCCTTATCATTTGTGATAGTAATCTTCTCAGATTTACCAGTACCCTTATCCTTT 83678 Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 ||| | || | | |||||||| | ||| | ||||| || || |||||||| || || Sbjct 83677 GCACTAACTTGTAAAATACCATCAGTATCAATTTCAAAAGTAACCTCAATTTGGGGAACA 83618 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 ||||| |||| |||||||| || | | ||| |||| || ||| ||||| ||| Sbjct 83617 CCTCTTGGAGCTGGTGGGATTCCAGAAAGCTCGAATTTTCCAAGGAGATTGTTATCCTTA 83558 Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT---TGATTATCTGAA 517435 || | | || |||||||| ||| |||||| | ||||| | ||||||||| Sbjct 83557 GTCATTGGACGCTCACCCTCATAAACCTGGATA---AGTACAGCTGGCTGATTATCTTGG 83501 Query 517436 TAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATT 517494 ||||| | || ||| ||| | || || |||| ||||||||| |||| | || Sbjct 83500 TAAGTACTGAAAACT-TGGCTCTTCTTGGTTGGAACAACAGTGTTTCTACCAATGAGCTT 83442 Query 517495 GGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGAC 517554 ||||||| ||||| | || || | ||| | || | |||||| ||||| | || Sbjct 83441 TGTCATAACTCCACCAACAGTCTCAATACCTAAAGTTAAAGGAGTAACATCCAATA---- 83386 Query 517555 AATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACC 517614 ||| | || | | | | || ||| | | ||| | ||||| | |||||||| Sbjct 83385 -ATAAT---AAATCACT-ACCGCCTTCACCTGCTAAGATACCAGCTTGTACGGCAGCACC 83331 Query 517615 ATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT- 517673 ||| || || |||||||| || |||| | ||| | | || |||| || || | Sbjct 83330 ATAAGCGACGGCTTCATCTGGGTTAATTCCTCTGTTTGGCTCCTTTCCATCAAAGAACTC 83271 Query 517674 -TTGAAAGAAG-TTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTC 517731 |||| | | ||| | |||||| ||||||| || || ||||| || || || || Sbjct 83270 CTTGATCAAGGCTTGAAT---CTTAGGGATACGAGTAGAACCACCAACCAAAACGATCTC 83214 Query 517732 ATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACC 517791 || || | || || | | | | |||| ||||| || | ||| || || | | Sbjct 83213 ATCTACTTCAGACTTTTTGATTCCAGCATCCTCCAAAACCTTCTTAACTGGCTCGATAGT 83154 Query 517792 CGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATA 517851 | ||| |||||||| | | | || |||||||||||||| || | || | | | Sbjct 83153 CTTTCTGAACAAGTCAGCATTCAACTCATCGAATTTAGCTCTGGTCAAGGTTTCGCTCAA 83094 Query 517852 ATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGC 517911 ||| | | || | |||| |||| || | | || ||| | | ||||| || || Sbjct 83093 ATCTACATCCTCCATCAAACCTTCAATCTCGACCTTAACTTGTGGAGCTGAAGAAAGAGC 83034 Query 517912 ACGTTTAGCACGT-TC-ACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGA-TT 517968 | || | || | || || | || |||| || |||| |||| | | || || || Sbjct 83033 TCTCTTTG-ACTTCTCGACCT-CTCTCCTAAG-CTTCTGAAGGGCTCTCTTGTCAGACTT 82977 Query 517969 CAAATCTGTTTTATAT-TTTCTCTTGAA-ATCTTCAACACACCATGTTACAAGACGATT- 518025 | ||| ||| | | ||| ||||| ||||| | | || | || || | Sbjct 82976 TACATCC-TTTCCTGTCTTTGACTTGATGATCTTGATAAAG---TGGTCCATAACTCTCT 82921 Query 518026 -ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 518084 ||| ||||| ||||||||||| | |||| || ||||| || | ||||| | Sbjct 82920 GATCGAAATCCTCACCTCCCAAATGGGTATCACCACTTGTAGCAACGACCTCGAAAACAC 82861 Query 518085 CATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 518144 | | |||| | ||| |||| |||||| || |||||||||| ||| | | | | Sbjct 82860 CGTTATCAATGGTCAAGAGAGAAACATCAAAAGTACCACCACCCAAATCGTATACTA--A 82803 Query 518145 CATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 518204 || | |||| | ||| || || | |||| | |||| || || || ||||| | Sbjct 82802 AATGCTCTTCTCAGCCTTC----TTGTCCAAACCAAAAGCAATTGCTGCTGCTGTTGGCT 82747 Query 518205 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 518264 |||||||||| | | ||||| | ||| ||||| || ||||| || || || || | Sbjct 82746 CATTAATAATACGAATTACATTCAAACCGGCAATAGCACCAGCATCCTTGGTAGCCTGAC 82687 Query 518265 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAA 518324 || | ||| ||||| || || || ||||||||||| |||| ||||||| ||||| | Sbjct 82686 GCTGAGCATCATTAAAGTAAGCTGGGACAGTAATAACTGCATGCTTTACTTCCTTACCGA 82627 Query 518325 TATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGG 518384 |||||| || ||| ||||| || || | ||| | ||||| | |||||||| Sbjct 82626 GATAAGCCTCAGCAATTTCCTTCATCTTGACCAAGACCATAGCTGAAACCTCTTCTGGGG 82567 Query 518385 AATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAA 518444 ||||||| ||| | | || |||| | || || || || | |||| Sbjct 82566 CTAATTGCTTCTTCTCACCCTTAACAGAAACTTGTATGTAAGGCTTGCTATCTTTGTTAA 82507 Query 518445 TAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTAC 518504 ||| | | |||| | || |||| ||| || | || ||||| | || Sbjct 82506 TAATCTCATATGGTAGCAAAGTCTTATCCTTTTGGACGGAATCATCCTTAAAGCGACGAC 82447 Query 518505 CAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGG 518564 |||| | || ||| |||| || | ||| | |||||| || | |||||||| |||| Sbjct 82446 CAATAAGTCTCTTTACATCGAACAAAGTCTGAACTGGATTGATAGTAGCTTGATTCTTGG 82387 Query 518565 CTGCATCTCCAATCAGATGTTCTGTC-TCTGTAAATGAAACATATGATGGAGTTGTGCGA 518623 ||| || ||||||| || | || || || ||||| ||||||||||| || | ||| Sbjct 82386 CTGATTCACCAATCA-ATCTCTCATCATCAGTGAATGATACATATGATGGTGTAATACGA 82328 Query 518624 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 518683 |||||||| ||||| | |||||| || ||| ||||||| | | | ||| ||||| | Sbjct 82327 TTACCTTGTTCATTTGGAATAATCTCTACTCTACCATTCTTGTAGATACCAACACATGAA 82268 Query 518684 AAAGTTGTTCCTAAATCAATACCAATA 518710 |||| || |||||||| ||||||||| Sbjct 82267 TAAGTAGTACCTAAATCGATACCAATA 82241 >seq4 Length=891386 Score = 147 bits (162), Expect = 2e-29 Identities = 336/493 (68%), Gaps = 27/493 (5%) Strand=Plus/Plus Query 517155 ATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTAT 517214 |||||| ||||||||| |||||| ||||||||| | | || | | ||| || || Sbjct 652042 ATTCTTCAGCTTCTCTGATCATTTTCTCAATTTCAGCACCACTTAGACCTCCA-GAAGAT 652100 Query 517215 TAGTAATAGTAATATTCTTGGATTTGTTT---GTTGATTTATCAGCGGCAGTCACATTAA 517271 | |||||| || | | || ||| ||| ||||| |||||| ||| ||||| | Sbjct 652101 TG--AATAGTGATCT-CGTG--TTTCTTTCCAGTTGACTTATCAATTGCACCAACATTCA 652155 Query 517272 GAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAG 517331 ||| ||||| ||||| | |||||| ||||||||||||||||| |||||||| | || | Sbjct 652156 TAATTCCATTTGCATCAATATCAAAGGTGACTTCAATTTGAGGTACCCCTCTGGGTGCTG 652215 Query 517332 GTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTT 517391 | || || || || | |||| ||| || |||||||| || |||| || || Sbjct 652216 GAGGAATTCCCATCATTTCAAATTGTCCAAGCAACTTATTATCAGCAGCAAATTCTCTTT 652275 Query 517392 CACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTC 517451 | || | ||||| || || |||| ||||||||| |||| | ||| | |||||| Sbjct 652276 CTCCTTGGAAAACTTTAATTCCAACTTGAGTTTGATTGTCTGCAGCAGTGGAGAATACT- 652334 Query 517452 TGGAT-TTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTG-GTCATAATACCACC 517509 ||| | |||||| ||| ||||| || ||||| | ||| | || | || | || ||||| Sbjct 652335 TGGCTCTTTTTAGTAGGTATTGTGGTATTTCTGTTAATTA-ATCGAGTAAAAACTCCACC 652393 Query 517510 TGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT-TTTGAAGTT 517568 ||||| | ||| | ||| | || || || || | || | || || |||| Sbjct 652394 CAAAGTTTCAATACCTAAAGATAAGGGTGTAACGTCGAGTAACAAAAGATCCTTGA---- 652449 Query 517569 TTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 517628 || | ||| ||| || | | ||||| |||||||| || ||||||||||| Sbjct 652450 --TCTCCCCTTT---CAA----AACACCAGCTTGTATAGCAGCTCCCATTGCAACAGCTT 652500 Query 517629 CATCAGGATTAAC 517641 | ||||| ||||| Sbjct 652501 CGTCAGGGTTAAC 652513 Score = 104 bits (114), Expect = 2e-16 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 || || |||| ||| || || ||||| |||||||| ||||| ||||| | || || Sbjct 653052 CCGTATGCAAGAGCCGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAGCCTGCT 653111 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296 || || ||||| ||||| ||||| | || ||||| ||||| || || || |||||| Sbjct 653112 ATAGAGCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTA 653171 Query 518297 ATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTT 518356 ||||| |||| |||| || |||||| ||||| || |||| ||||||||| Sbjct 653172 ATAACAGCATGCTTTACACCTCTACCAAGATAAGTTTCGGCAGTTTCTTTCATTTTTTCC 653231 Query 518357 AAAATCATTGATGAAATTTG 518376 ||||| | || | |||||| Sbjct 653232 AAAATAAATGCTCCAATTTG 653251 Score = 91.5 bits (100), Expect = 1e-12 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 322244 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 322303 |||||||||||||| ||||| ||||| |||||||| ||| | |||| ||| || || Sbjct 653052 CCGTATGCAAGAGCCGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAGCCTGCT 653111 Query 322304 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 322363 || ||| ||| ||||||||| | ||| | |||||||| || ||||| |||||| Sbjct 653112 ATAGAGCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTA 653171 Query 322364 ATAACTGC 322371 ||||| || Sbjct 653172 ATAACAGC 653179 >seq2 Length=1232092 Score = 114 bits (126), Expect = 1e-19 Identities = 296/441 (67%), Gaps = 14/441 (3%) Strand=Plus/Plus Query 396953 TCGAATGGATTATCAACATTGAAT-TTTTTGCGATAACCAAGATCTACAAGTAATCTGTC 397011 || || |||||| ||| ||| | |||||| ||| ||||| | | ||||||||| || Sbjct 90253 TCAAAAGGATTAGAAACGTTGTAGATTTTTGGAATATCCAAGG-CAAAAAGTAATCTATC 90311 Query 397012 AGCAACATATTTAATATATTGAGACATTAGTTCAGAATTCATACCAAGAAGTTTACACGG 397071 ||||||| ||| ||||||||| | ||| ||| ||||||||||||| ||| | | || Sbjct 90312 AGCAACAAATTCAATATATTGGGCCATAAGTCTCGAATTCATACCAATAAGATCAACAGG 90371 Query 397072 AAGAGAATCATTAATAAATTCTTCTTCAATTTCAATCGCTTCGTCAATAATTTGGTAAAC 397131 |||||| ||| || ||| | | ||||| ||||| ||||| || ||||| | || Sbjct 90372 AAGAGAGTCACAAAGAAAGTTTCTTTCAACTTCAACAGCTTCTGATATGATTTGTTGTAC 90431 Query 397132 AACAGATTCTTTCAAACGATTATTCAACAATGAATACATAATACAAGCAAGTTCTACATG 397191 || || || | || | | ||| || | |||||||| || |||| Sbjct 90432 TCTAGGAGCTGGTAATTTAAATTTAAGGGCTTTATATATTAAACAAGCAAAATCAGCATG 90491 Query 397192 TTTGTTTTCATCACGAGCAATAAATTGATTTGATATAATTAGACCAGGCATTACATGCAT 397251 |||||||||| ||||| || ||| || | | || ||||||| || | || Sbjct 90492 GAGACCTTCATCACGACTAATAAGTTCATTAGAAAATGTGAGTCCAGGCA-TAAGTCCAC 90550 Query 397252 TTCTCTAGTTTTTAA-CCAGAAAATCGAAGCAAATGAT-CCACTAAAGAAAACGCCTTCT 397309 | ||||||| ||| ||||| | | |||| | | ||| ||| | || ||||| Sbjct 90551 GT------TTTTTAAGCCAAAAAATTGCA-CAAAAGCTACCAGAAAATAGAATTCCTTCA 90603 Query 397310 ACAATAGAGAATGCTACTAATT-TGTGAGCATAAGTCTTATCAGATTTAATCCATTTATT 397368 ||| | ||||| | | ||||| | | |||| ||| ||||| || ||||||||| | Sbjct 90604 ACAGCACAGAAT-CCAATAATTCTTTCAGCAAAAGATCGCTCAGAATTCATCCATTTAGT 90662 Query 397369 ACACCAATCAGCTTTCTTTTT 397389 ||| || ||||||||||| Sbjct 90663 TGCCCATTCTGCTTTCTTTTT 90683 Score = 86.0 bits (94), Expect = 5e-11 Identities = 127/179 (71%), Gaps = 1/179 (1%) Strand=Plus/Minus Query 668849 TTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCT 668908 |||| |||||||||||| ||| | ||||||||||||| || ||| | || ||| | | Sbjct 696598 TTAA-AGGTAAAGAAGGACGTTTCAGAGGAAATTTGAGTGGTAAAAGAGTTGATTTTAGT 696540 Query 668909 GCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTT 668968 | | | || |||||| || |||| || ||||||| | ||||||||| || ||| | Sbjct 696539 GGAAGAACTGTTATTTCTCCTGACCCTAATATTGAAGTTGATGAAGTTGTGGTACCTATG 696480 Query 668969 ATTATTGCTAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGAGTATTT 669027 || ||||| || || | |||| | ||||| || | | ||||||||| | ||| Sbjct 696479 ATCATTGCAAAGAAATTGACTTATCCCGAAAGAGTTAATGCTATTAATATTGACTCTTT 696421 >seq10 Length=178539 Score = 105 bits (116), Expect = 5e-17 Identities = 134/183 (73%), Gaps = 1/183 (1%) Strand=Plus/Plus Query 870794 AAAATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTA 870853 ||| | ||||| |||| || || ||||| ||||| |||||||||||| ||||||| ||| Sbjct 153296 AAAGTAATTGTAGATTTCTCATCACCAAACATTGCCAAAGAAATGCATGTTGGACACTTA 153355 Query 870854 AGATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTT 870913 ||||| || ||||||||||| | | ||||| | | ||| | ||| || || Sbjct 153356 AGATCTACAATTATTGGTGATACAACATGTAGAATTCTTGAATATTTAGGATTTGAAGTA 153415 Query 870914 TATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTATATT 870973 | | ||||||| || || |||||||| |||||||| || ||| | |||| ||| || Sbjct 153416 TTAAGAGTTAATCACGTTGGAGATTGGGGTACTCAATTTGGCATGCTTATTGAATAT-TT 153474 Query 870974 AAA 870976 ||| Sbjct 153475 AAA 153477 >seq9 Length=412584 Score = 105 bits (116), Expect = 5e-17 Identities = 331/503 (66%), Gaps = 15/503 (3%) Strand=Plus/Plus Query 636275 TATTATGATTTCATTCACAAAGAACTTATTACTTTTTCTGTGGATGACGTTCT--TAGAT 636332 |||| |||||| ||||| ||||||||| | || || || ||| | || ||||| Sbjct 219481 TATTTTGATTTTATTCATAAAGAACTTGTA--TTATTTAGTAGATATGATACTACTAGAT 219538 Query 636333 CTGTTCCTAATTTAATGGATGGATTTAAACCATCACATCGCAAAGTATTTTATGGTTCTG 636392 || |||| |||||| | ||||| || ||||| ||| | |||||| ||| || | Sbjct 219539 CTATTCCAAATTTATTAGATGGTTTAAAACCTGGACAAAGAAAAGTACTTTTTGCAACAT 219598 Query 636393 TTGAAAAGAATATTTATAAGCAAGAGATTAAAGTATCAGATTTGACTGGTTTTGTCTC-G 636451 || |||| || || |||| || ||||||| || | || |||||| ||| | | Sbjct 219599 TTAAAAAAAAGCTTAATAATGAAC---TTAAAGTTGCACAATTAGCTGGTTATGTTGCTG 219655 Query 636452 AATATGACGAAATATCATCATGGTGATCAATCATTATCATCAACTATTGTCGGAATGGCT 636511 || || | ||||||||||| || |||||| | |||||||| |||||| Sbjct 219656 AACATAGTGCT-TATCATCATGGAGAATCATCATTGCAAAGTACTATTGTTAATATGGCT 219714 Query 636512 CAAAATTATGTGGGAAGTAACAATCTCAATTTGTTAATGCCATTGGGAATGTTTGGATCT 636571 ||||||| ||| |||||||| ||||| ||| | ||| |||| || ||||| | Sbjct 219715 CAAAATTTTGTTGGAAGTAATAATCTAAATCTATTAGAACCATGTGGTCAATTTGGTAGT 219774 Query 636572 AGATTGACCGGAGGTAAAGATTCAGCGAGTCCTAGGTATTTGAACACTAAATTAGATGAT 636631 ||| || || |||||| || | || | ||| | ||||| || | | Sbjct 219775 AGAAAAGAAGGTGGAAAAGATGCAAGTGCTGCTCGTTATATATTTACTAAGCTATCTAAA 219834 Query 636632 TTGGCAAAGAAAATCTTCATTGATTATGATTTTGATATTCTTCAACATCAGTCAGAAGAT 636691 | | | | | || ||| || |||| | | || || ||| | | | | | ||| Sbjct 219835 TGGACTAGATATATTTTCCCAGAGGCTGATGATCCT-TTATT-AAC-TTATTTATATGAT 219891 Query 636692 AATTG---TCGAATTGAACCTGTTTATTATGCTCCTATTATTCCAATGATACTTGTAAAT 636748 || | | |||||||||| | ||||| | ||| || ||||||||||| | |||||| Sbjct 219892 GATGGACAACAAATTGAACCTTTATATTACGTTCCAATAATTCCAATGATTTTGGTAAAT 219951 Query 636749 GGAGCTGAAGGAATTGGTACTGG 636771 || |||| ||||||||||| || Sbjct 219952 GGTACTGATGGAATTGGTACAGG 219974 Score = 98.7 bits (108), Expect = 8e-15 Identities = 223/340 (66%), Gaps = 33/340 (10%) Strand=Plus/Plus Query 634316 ATTACTTATGTACCTGGTCTATATAAAATTTATGATGAAGTAATTGTAAATGCGGCAGAT 634375 |||| ||||||||||||| ||||||| |||| ||||||| | | || ||||| || ||| Sbjct 217282 ATTAATTATGTACCTGGTTTATATAAGATTTTTGATGAAATCTTAGTTAATGCTGCTGAT 217341 Query 634376 CATAA--CAAGAGA-------------------------TGTCAAACATGTAATATTATC 634408 ||| | ||||| | | ||| ||||| | ||| Sbjct 217342 GTTAAAGCTAGAGAAATTTCAACTAAAAATAATCATATTTTTGAAAAATGTACTTGTATT 217401 Query 634409 AAAGTTGATATCGATC---AAAAAACAGGTCAAATTTCTGTTTGGAATAATGGTGATGGT 634465 |||||||| || || |||||| || ||||| |||| | ||| |||| || || Sbjct 217402 AAAGTTGAAATTAATAGAGAAAAAAAAG---AAATTACTGTATTTAATGATGGAGAAGGA 217458 Query 634466 ATTGATGTAGCAATTCATAAAGAACATAATATATGGGTACCATCAATGATTTTTGGAGAA 634525 || | | ||| |||| ||||||| | ||| || ||| | | ||||||||| | Sbjct 217459 ATACCAATTGAAATACATAGAGAACATCAAGTATATGTTCCAGAATTAATTTTTGGACAT 217518 Query 634526 CTTTTAACGTCTACTAATTACGATAAAAACGAGGAAAAAACTGTTGGTGGTAAAAATGGT 634585 | ||||| ||| |||||| ||| | || || || | | | ||| || | ||||||| Sbjct 217519 TTATTAACTTCTGATAATTATGATGATAATGAAGATAGAGTTACTGGAGGAAGAAATGGT 217578 Query 634586 TTTGGCGCTAAGCTTGCTAATATTTATTCTGTTGAATTTA 634625 ||||| || || ||| ||||||| | ||| ||||||| Sbjct 217579 TTTGGAGCAAAACTTACTAATATATTCTCTAAAGAATTTA 217618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780821506780708