Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001305415.1_202015-10- 01] 18 sequences; 9,001,535 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq12 356 2e-92 seq4 269 2e-66 seq1 228 5e-54 seq10 147 1e-29 seq9 141 6e-28 seq7 123 2e-22 seq2 113 3e-19 >seq12 Length=162451 Score = 356 bits (394), Expect = 2e-92 Identities = 670/974 (69%), Gaps = 27/974 (3%) Strand=Plus/Plus Query 475310 GGAACTCATGACGTAACTTTACTATCACTCGAAGATGGTCTTTTCTCTGTAAGAGCAACA 475369 || ||| ||| ||| | ||| || | | ||||||||| |||| || | ||| || Sbjct 148342 GGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTTAAAGCTACC 148401 Query 475370 GCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGGTGTGTT 475429 ||||| ||| | || | |||||||||||||||||||| ||||| ||| || ||||| Sbjct 148402 GCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAACAGACTCGTAGAATTCTGTGTA 148461 Query 475430 GAAGATTTCAAGAGGAAAAATAAAGTT---GATCTTTCAACATCTGCTAAAGCATTAAGA 475486 ||||||||||||| || |||| || | ||| | | ||| ||||| ||| |||||| Sbjct 148462 CAAGATTTCAAGAGAAAGAATAGAGGTATGGATTTAACCACAAATGCTAGAGCTTTAAGA 148521 Query 475487 CGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACT 475546 | || |||||| || || ||||| ||| || || | || ||| |||||||| |||| Sbjct 148522 AGACTCAGAACTCAATGCGAGCGTGCAAAGAGAACTTTGTCATCTTCTACTCAAGCTACA 148581 Query 475547 GTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAA 475606 |||| | ||||| || | |||||| ||||||||| | || | || |||| | Sbjct 148582 ATTGAGTTAGATTCACTCTATGAAGGTATTGATTATTCAGTTGCCATCAGTAGAGCTAGA 148641 Query 475607 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTC 475666 || ||||| | || ||||| ||| | ||| | | || ||||| |||| ||| Sbjct 148642 TTCGAAGAACTCTGCGCTGATTACTTCCGTGCAACTTTAGCTCCAGTTGAGAAAGTACTC 148701 Query 475667 AGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACA 475726 | ||| || | ||||| | || ||||| |||| | || || ||||| ||| Sbjct 148702 AAGGATGCTGGTATGGACAAGAGATCTGTACATGATGTTGTATTGGTTGGTGGTTCTACA 148761 Query 475727 AGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATG-A 475785 | |||||||| | | || || || ||||| |||||| || | || | Sbjct 148762 CGTATTCCAAAGGTTCAGGCCTTGATTCAGGAATTCTTTAACGGTAAAGAGCCA--TGCA 148819 Query 475786 AAGTG-TAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTAT 475844 ||| | ||||| || ||||||||||| ||||| |||||||| ||||| ||||| ||| Sbjct 148820 AAGCAATCAATCCAGACGAAGCTGTTGCTTATGGTGCTGCTGTACAAGCTGCTATCTTAA 148879 Query 475845 CAGGT---CAATCA---GACG---AGAAACTAAATAATATTGTACTTGTTGACGTAACTC 475895 ||| ||||| | || || | || || ||||| | ||||| ||| Sbjct 148880 ATGGTGAGCAATCCTCTGCCGTACAGGATCTCT-TATTATTGGA--TGTTG------CTC 148930 Query 475896 CACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATA 475955 || | ||| | ||| | ||||| | ||| || ||||||| || |||||||| | |||| Sbjct 148931 CATTATCACTCGGTTTAGAAACTGCTGGTGGTGTTATGACCAAGCTTATTGAACGTAATA 148990 Query 475956 CTCCTATCCCATGCAAAAAAT-CAAAAGTATTTTCCACTTATTCTGATAATCAAACAACT 476014 | |||||||| ||||| || || |||| || | |||||| ||||||| || | | Sbjct 148991 CAACTATCCCA-GCAAAGAAGACACAAGTCTTCACTACTTATGCTGATAACCAGAGTGGT 149049 Query 476015 GTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGA 476074 || |||||| | | ||| ||||| ||| | ||||| ||||| | || ||| Sbjct 149050 GTCTTGATCCAAGTTTATGAGGGTGAGAGAGCCATGACTAAGGATAACCATCTCCTCGGA 149109 Query 476075 ACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACT 476134 | || ||||||| |||||||| || || || ||||| || || ||||||||||| || Sbjct 149110 AAGTTCCATCTTGATGGTATTCCACCAGCACCAAGAGGTGTACCACAAATTGAAGTCACC 149169 Query 476135 TTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGTAACAAG 476194 |||||||||||||| |||||||| | ||||| ||||| |||||| || | ||| Sbjct 149170 TTTGATATTGATGCTAATGGTATCTTGAATGTGTCTGCTGTTGATAAGAGTACTGGTAAG 149229 Query 476195 AGTAAAAATATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGT 476254 || | || || |||||||| ||| || |||||||| | | || | ||| ||||| Sbjct 149230 AGCAGCAAGATCACTATTACTAACGATAAGGGTAGATTATCAAAGGACGATATTGAACGT 149289 Query 476255 ATGGTTGATGAAGC 476268 |||||| |||| || Sbjct 149290 ATGGTTAATGATGC 149303 Score = 253 bits (280), Expect = 1e-61 Identities = 388/551 (70%), Gaps = 3/551 (1%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || ||||||||||||||||| || || ||| ||||| | ||| ||| ||| | || Sbjct 147748 GCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAACGATACT 147807 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 ||||| || || | || || |||||||| | ||||||||||||||||| | ||||| Sbjct 147808 GTAGATATTGTTCCAAACGATCAAGGTAACCGTACAACACCATCATATGTAGCATTTACA 147867 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 |||||||| | ||||||||| ||||| || || | |||| ||| || || | ||| Sbjct 147868 GAAACTGAGCGTCTTATTGGTGATGCAGCAAAGAACCAAGTTGCTAGAAACCCAGAAAAT 147927 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || |||||||||||||| | | |||||| | || ||||||||| | || ||| | Sbjct 147928 ACAGTTTTTGATGCTAAACGTCTTATTGGTAGAAAGTTTGATGATCAGGCAGTACAAAGT 147987 Query 474569 GATATGCGTCATTGGCCTTTTAAGGT-GATAAATGT--TGGTGGTAAACCATATATAGAA 474625 |||||| ||| ||||| ||||| || | || | || | || ||| || Sbjct 147988 GATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGACAAGCCAATCATCAGT 148047 Query 474626 GCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685 | || || |||||||| || |||| | ||| |||||||| | ||||||||| Sbjct 148048 GTAAACTACTTAGGTGAAAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGTTTTA 148107 Query 474686 GCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATT 474745 || ||||| | | | | |||| | || | || | | | || ||| || Sbjct 148108 CAAAAGATGAAGGAGATCTCTGAAGCATACTTGGGTCGCCAAATTAAGAACGCTGTAGTT 148167 Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 ||||||||||| ||||| ||||| || || ||||||||||| || ||||| || |||| Sbjct 148168 ACTGTTCCAGCTTATTTCAATGACTCACAGCGTCAAGCAACAAAGGATGCAGGTGCAATT 148227 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || ||| | ||||| | | || ||||| || ||||| ||||| || ||||||||||| Sbjct 148228 GCTGGTTTGAATGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTGCTTATGGT 148287 Query 474866 CTTGATAAGAA 474876 ||||||||||| Sbjct 148288 CTTGATAAGAA 148298 >seq4 Length=891386 Score = 269 bits (298), Expect = 2e-66 Identities = 689/1027 (67%), Gaps = 59/1027 (6%) Strand=Plus/Plus Query 296689 GGAACTGGTTTTGTGCATATTGCTCCTTCACATGGAGAGGATGATTTCAGAGTTTGTTGT 296748 || |||||| |||| ||||| |||||| | ||| || ||||||| ||||||||| Sbjct 748710 GGTACTGGTATTGTACATATGGCTCCTGCTTTTGGTGAAGATGATTATAGAGTTTGTGTA 748769 Query 296749 CTTAATAATATTATTGATTCGAGAAATACGCGAGGCAATTTAATTGATGTA--ATTGATG 296806 |||| |||||||||| ||| | |||||| |||| || ||| Sbjct 748770 AGTAATGGTATTATTGAT------AATCATGGTACAAATTTACC--ATGTCCTATGGATT 748821 Query 296807 ATGATGGTAAATTTACAAATCAAATTCATGATTATTTTGGTATATATTTTAGGGATGCTA 296866 | |||||| |||||| | | || |||||| || |||| |||| ||| || Sbjct 748822 CTAATGGTAGATTTACTGAACCTGTTAATGATTTAAAAGGAATATGGTTTAAAGATTCTG 748881 Query 296867 ATAATCTTATTATTAAAGATTTGAAACATAAAA--AG-TTATTGTTTGATTTTAAACAAT 296923 |||| |||||| |||| || ||| | ||| || ||||| |||| || | | Sbjct 748882 ATAAAATTATTAAACAAGAATTAAAAAAAAAATCCAGATTATTAACTGATAATACA---T 748938 Query 296924 ACAAACATTCTTATCCTTTTTGTTATAGAACAGATACTCCACTTATTTTTAAAATTTGTT 296983 | |||||||||||||| |||| ||| | ||||| || ||| | | | |||| Sbjct 748939 GTATGCATTCTTATCCTTTCTGTTGGAGATCTGATACACCT-TTACAATATAGAGCTGTT 748997 Query 296984 C-TGGTTGGTTTTTAAACGCATCaaatgaaaaattcagagaaaaaatgatgattaataat 297042 | | ||||||| | || | |||| || | ||| ||| | | ||||||||| Sbjct 748998 CCTTCTTGGTTTATTAATGT------TGAATCTTTAAAAGATAAATTATTAATTAATAAT 749051 Query 297043 tctaaaataaattGGATGCCATCAAATAT-TGGTACAAATCAT-TTTGATAATTGGTTAC 297100 |||| |||||||| ||| || ||| | | ||| | ||| |||||||||||| Sbjct 749052 GAAAAAACTAATTGGATTCCA--AATTATGTTAAAGAAAAAAGATTTCATAATTGGTTAC 749109 Query 297101 AATCTTCAGTGGATTGGTGTATTTCAAGAAGTAGATATTGGGGAACACCAATTCCAATTT 297160 || | | ||||||||| || | | | | | |||||||||||| || || || | Sbjct 749110 AAGATGCTAGAGATTGGTGTGTTAGTCGTAATCGTTTTTGGGGAACACCTATACCTATAT 749169 Query 297161 GGAAATCTGATGATGGTGAAGAAATAATTTGTATTGGTTCACTTGAAGAATTAAAAGAAT 297220 || ||| || ||| | | || | ||||||||| |||||||||||||| | Sbjct 749170 GGGTATCAGAAGATTATACAATTATTAAATGTATTGGTAGTATTGAAGAATTAAAATCTT 749229 Query 297221 TTTCAGG-AATT-----GATAAT---ATTAATGATTTACATATTGATAAAATTGATCAAA 297271 | || |||| ||||| ||||||||| ||||| | || |||||| | | Sbjct 749230 TAGCATCCAATTTAAAAGATAAAGAAATTAATGATATACATCGTCATTTTATTGATTATA 749289 Query 297272 TAAAAATTCCTTCTCGTAAAGGAAA-----AGGCATG-TTATCTCGTGTTACCGGTGTTT 297325 | |||||||| || | |||||| | || ||| | || | |||| Sbjct 749290 TTGAAATTCCTGATCCAAGAGGAAATAATTATCCACCATTAAAAAGAATTGAAGAAGTTT 749349 Query 297326 TAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTATCCTTTTGAAA 297385 | ||||||||||||||||| |||||||||||||||| ||| ||||||| ||||||| Sbjct 749350 TTGATTGTTGGTTTGAATCTGGTTCTATGCCTTATGCATCCATTAATTATCCATTTGAAA 749409 Query 297386 ATTCCGAAATTTTAGACACTTCACAAGATTATATTGCAGATTTTATAACAGAATCAATTG 297445 || ||| | || | | | | ||| | |||||||||| | ||| | | Sbjct 749410 ATCAAGAATTATTTAATAAT-----ATATT-TCCTGCAGATTTTGTTGGTGAAGGTTTAG 749463 Query 297446 ATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCTATATTTAACAAAC 297505 ||||||||||||| ||||||||||| ||| | || | || ||||| ||||| | ||| Sbjct 749464 ATCAAACAAGAGGATGGTTTTATACATTAATGGTATTATCAACAGCATTATTTGATCAAC 749523 Query 297506 CAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTGATGGACAAAAAATGT 297565 |||| ||||||||| | ||||||| || | ||| ||| ||||||| ||||||||| Sbjct 749524 CAGCTTTTAAAAATATTATTGTTAATGGTTTAGTTTTAGCATCTGATGGTAAAAAAATGT 749583 Query 297566 CAAAAAG--TAAAGGTAATTATCCTGATCCA-AATATTTTGATGGATAAATATGGTGCAG 297622 ||||||| |||| ||||||||||||||| | || ||| | ||||||||||||||| Sbjct 749584 CAAAAAGATTAAA--AAATTATCCTGATCCATTAGATATTG-TTAATAAATATGGTGCAG 749640 Query 297623 ATACTTTACGTCTTTATTTATTATCAA--CACCTGTAGTTAAAGCCGAATCAATTAAATT 297680 || ||||| | |||||| | || || |||| || |||| ||| ||| | | | ||| Sbjct 749641 ATTCTTTAAG--ATTATTTTTAATTAATTCACCAGTTGTTAGAGCAGAAACTTTAAGATT 749698 Query 297681 TGATGAA 297687 | | ||| Sbjct 749699 TAAAGAA 749705 Score = 214 bits (236), Expect = 1e-49 Identities = 348/494 (70%), Gaps = 18/494 (4%) Strand=Plus/Plus Query 295795 GATGGACCTCCATTTGCTACAGGA--ACTATGCATTATGGACATATTTTAGTCTCAACTA 295852 |||||||||||||||||||||||| || | |||||||| ||||| | | ||| Sbjct 747879 GATGGACCTCCATTTGCTACAGGATTACCA--CATTATGGTCATATACTTGCAGGTACTG 747936 Query 295853 TTAAAGATACCATGACTAGATATTTAACAATGAATGGTTATCAAGTTAATATGGGAATTG 295912 |||||||| | || |||||| ||| || || ||| | | | | || ||| Sbjct 747937 TTAAAGATGTAGTTACAAGATATGCAACTCAAAAAGGATATTATTGTGAAAGAAGATTTG 747996 Query 295913 GTTGGGATTGCCATGGAGTTCCAATTGAA-ATG---TTGGCTaaaaaaaCTATCGGATAT 295968 | ||||||||||||||| | ||| | ||| ||| ||| | |||| || | || Sbjct 747997 GATGGGATTGCCATGGATTACCAGTAGAACATGAAATTG-----ATAAACAATT--AAAT 748049 Query 295969 ATCACAA--AGA-AAGATTTATTGGAATACGGTATTGATCGTCATAATGATATTTGTCGT 296025 ||||||| ||| ||||| | || | | ||||| ||| | ||||||| ||| | Sbjct 748050 ATCACAAGTAGAGAAGATGTTTTAAATAAAGGTATAGATTTTTATAATGAATCATGTAGA 748109 Query 296026 GATATGGTATTAAAATGTACTGATAAATGGTATTCTGATTTTGAGAGAATTGGAAGATGG 296085 || ||||||| || |||| | ||||| | || | |||| ||| ||||||||| Sbjct 748110 TCAATTGTATTAAGATATACTCAAGAATGGAAATCAACTGTTGAAAGAGTTGGAAGATTA 748169 Query 296086 ATTGATATTAATAATGAATATAAAACAATGGATAAAAATTTTATGGAATCTGTTATTTGG 296145 || ||| || |||||| |||||||| |||||| |||||| ||| || |||| ||| Sbjct 748170 ATCGATTTTGATAATGGTTATAAAACTATGGATTTAAATTTCATGCAAACTGTATGGTGG 748229 Query 296146 TCATTTAAACAACTTTATGAAAAGGAAATGATTTTTGAAGGTTATAAAGTTATGCCTTAT 296205 |||||||||||||| ||| ||| | | ||| | || ||||| ||| ||||| ||| Sbjct 748230 GTATTTAAACAACTTTTTGATAAGAATCTTGTTTATAGAGCTTATAGAGTAATGCCATAT 748289 Query 296206 TCTACTGGTTGCAATACACCATTATCTCATTTTGAGGCAAAACAAAATTATAAAGAGATT 296265 ||||| | || ||||||||||||| ||||||| || |||||||||||| || Sbjct 748290 TCTACAGCATGTGCTACACCATTATCTAATTTTGAATGTAATTTAAATTATAAAGATGTT 748349 Query 296266 ATTGATCCATCTGT 296279 | |||||||||||| Sbjct 748350 AATGATCCATCTGT 748363 Score = 140 bits (154), Expect = 2e-27 Identities = 270/397 (68%), Gaps = 16/397 (4%) Strand=Plus/Minus Query 475790 GTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT 475849 || || ||||| |||||||||||| ||||||||| | ||||| | | |||| ||| Sbjct 652513 GTTAACCCTGACGAAGCTGTTGCAATGGGAGCTGCTATACAAGCTGGTGTTTTGAAAGGG 652454 Query 475850 CAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGT 475909 |||| | || || || | | | ||||| || || | || |||||| Sbjct 652453 ---------GAGA---TCAAGGATCTTTTGTTACTCGACGTTACACCCTTATCTTTAGGT 652406 Query 475910 CTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGC 475969 ||||||| | || || || | ||| | ||| |||||||||| | || || Sbjct 652405 ATTGAAACTTTGGGTGGAGTTTTTACTCGATTAATTAACAGAAATACCACAATACCTACT 652346 Query 475970 AAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATC 476029 ||||| ||||||| |||||| | | || |||||||| || || || | Sbjct 652345 AAAAAGAGCCAAGTATTCTCCACTGCTGCAGACAATCAAACTCAAGTTGGAATTAAAGTT 652286 Query 476030 TTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTT--AATCTTG 476087 || |||| |||||| |||| || |||||||| |||||| ||| ||| || Sbjct 652285 TTCCAAGGAGAAAGAGAATTTGCTGCTGATAATAAGTTGCTTGGACAATTTGAAATGATG 652226 Query 476088 AAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATG 476147 || |||||||| || |||||||| || |||||||||||||| || ||||||||||||| Sbjct 652225 --GGAATTCCTCCAGCACCCAGAGGGGTACCTCAAATTGAAGTCACCTTTGATATTGATG 652168 Query 476148 CAAATGGTATTCTTAATGTTACTGCTTGTGATAAATC 476184 ||||||| ||| | |||||| ||| |||||| || Sbjct 652167 CAAATGGAATTATGAATGTTGGTGCAATTGATAAGTC 652131 Score = 125 bits (138), Expect = 5e-23 Identities = 138/184 (75%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 474681 TTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAG 474740 |||| | ||||||||| |||| || | |||||||| || |||| |||| | Sbjct 653235 TTTTGGAAAAAATGAAAGAAACTGCCGAAACTTATCTTGGTAGAGGTGTAAAGCATGCTG 653176 Query 474741 TAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAA 474800 | |||||||| ||||| || |||||||||||||| |||||||||||||| ||||| || Sbjct 653175 TTATTACTGTGCCAGCTTACTTTAATGATTCTCAGCGTCAAGCAACTAAGGATGCTGGCT 653116 Query 474801 GAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTT 474860 || ||||| | ||||| | | || |||||||| ||||||||||| || ||||| | Sbjct 653115 CTATAGCAGGCTTAAATGTAACAAGAATCATTAATGAGCCAACAGCAGCGGCTCTTGCAT 653056 Query 474861 ATGG 474864 | || Sbjct 653055 ACGG 653052 >seq1 Length=1283549 Score = 228 bits (252), Expect = 5e-54 Identities = 397/564 (70%), Gaps = 20/564 (4%) Strand=Plus/Plus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 |||||||| |||||||| |||||||| ||||| | | | | | ||||||| |||| Sbjct 82242 ATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAGAGTA 82301 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 || || ||| | ||||| ||||||||| | | |||||||||||||| || || ||||| Sbjct 82302 GAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCACTGAT 82361 Query 474452 ACTGA-ACATCTTATTGGAGATGCTGCTAAATATCAAGCTGC-ATCTAATCCTGTTAATA 474509 ||| | || | ||||| || | || || |||||||| | ||| ||||| ||| | | Sbjct 82362 GATGAGAGAT-TGATTGGTGAATCAGCCAAGAATCAAGCTACTATC-AATCCAGTTCAGA 82419 Query 474510 CTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTT---GATGATACCACTGTCCAAT 474566 || | || |||| || ||| | ||||||||| ||| |||||| || |||||| Sbjct 82420 CTTTGTTCGATGTAAAGAGACTTATTGGTCGTCGCTTTAAGGATGATTCC---GTCCAAA 82476 Query 474567 CTGATATGCGTCATTGG--CCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGA 474624 |||| | | ||| || | | || | || || | | | || || || ||| | Sbjct 82477 AGGATAAGACT--TTGCTACCATATGAGATTATTAACAAAGATAGCAAGCCTTACATACA 82534 Query 474625 AGCAATACACGCA--GGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTT 474682 || | | | ||||| | || ||||| | || ||| | |||| | ||||| Sbjct 82535 AGT--TTCTGTTAAGGGTGAGAAGAAGCAATTAGCCCCAGAAGAGGTTTCAGCTATGGTC 82592 Query 474683 TTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGT 474741 || | ||| ||||| ||| || ||| | ||||| || | ||||||| ||||||| Sbjct 82593 TTGGTCAAGATGAAGGAAATTGCTGAGG-CTTATCTCGGTAAGGAAGTAAAGCATGCAGT 82651 Query 474742 AATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAG 474801 |||||||| ||||| || ||||||||| |||| ||||| || || || ||||| || Sbjct 82652 TATTACTGTCCCAGCTTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGTGC 82711 Query 474802 AATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTA 474861 ||||| ||| | ||||| | |||||||||||||| ||||||||||| ||| |||||| Sbjct 82712 TATTGCCGGTTTGAATGTAATTCGTATTATTAATGAGCCAACAGCAGCAGCAATTGCTTT 82771 Query 474862 TGGTCTTGATAAGAATTCTGACAA 474885 |||| | || ||||| |||| || Sbjct 82772 TGGTTTGGACAAGAAGGCTGAGAA 82795 Score = 138 bits (152), Expect = 7e-27 Identities = 261/382 (68%), Gaps = 13/382 (3%) Strand=Plus/Plus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852 || || |||||||| || || ||||| ||||| || ||||| | ||| ||| ||||| || Sbjct 83307 AACCCAGATGAAGCCGTCGCTTATGGTGCTGCCGTACAAGCTGGTATCTTAGCAGGTGAA 83366 Query 475853 TCAGACG--AGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTC 475910 | || || | | | || ||||| | |||| ||||| | | |||||| Sbjct 83367 ---GGCGGTAGTGATTTATTATTATTGGA--TGTT------ACTCCTTTAACTTTAGGTA 83415 Query 475911 TTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCA 475970 |||| || ||||| || ||||||| || || |||| ||||| ||| | | ||| || Sbjct 83416 TTGAGACTGTTGGTGGAGTTATGACAAAGCTCATTGGTAGAAACACTGTTGTTCCAACCA 83475 Query 475971 AAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCT 476030 | || |||| || ||||| |||||||| || ||||| ||||| | | Sbjct 83476 AGAAGAGCCAAGTTTTCAGTACTTACCAAGATAATCAGCCAGCTGTACTTATCCAGGTTT 83535 Query 476031 TTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAG 476090 ||| ||||| | | | ||||| ||||| || ||||||| || | ||| | Sbjct 83536 ATGAGGGTGAGCGTCCAATGACTAAGGATAACAATCTCCTTGGAAAATTCGAGCTTTCTG 83595 Query 476091 GTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAA 476150 | || || || ||||| ||||| ||||| |||||||| ||||||||||| |||||| | Sbjct 83596 GAATCCCACCAGCTCCAAGAGGTGTTCCCCAAATTGAGGTTACTTTTGAAATTGATACTG 83655 Query 476151 ATGGTATTCTTAATGTTACTGC 476172 |||||||| | | |||| ||| Sbjct 83656 ATGGTATTTTACAAGTTAGTGC 83677 Score = 129 bits (142), Expect = 4e-24 Identities = 254/365 (70%), Gaps = 18/365 (5%) Strand=Plus/Plus Query 269113 CTCGTTAACAATTGTGTCGG-TCCACGCGCTCTAGAGTGAGTTTTATCGCCCACCATTTG 269171 || |||| || ||||| | | ||| | ||||||| ||| |||||||| | ||||| || Sbjct 838983 CTGGTTAGCA-TTGTGACTGCTCCTCTAGCTCTAGCATGAATTTTATCGTCAACCATATG 839041 Query 269172 TTTTAAACGCTGATAATATGTCGGACCAATAAATATTTT-GACATGCATTTTTTCTCCCG 269230 ||||| | |||||| || || || |||||||| ||| | ||| | || | | | ||||| Sbjct 839042 TTTTAGTCTCTGATAGTAAGTTGGCCCAATAAAGATTCTCGAC-TCCAATCTCTTTCCCG 839100 Query 269231 TCATACCATTTGTCATTGTTTCATTTCCCCATGCTTC--ATATCCG----TATG-AAACT 269283 | ||||| |||| ||||||||| || ||| | | ||| |||| |||| Sbjct 839101 TATGGCCATTGTACATTACTTCATTTCC--ATTTTTCTGAAACCCGGAACTATGTAAACG 839158 Query 269284 AGTTCATCATTTATTTTATTAATATCTACACCTGTAAATGGTGTCGCATCACCATATACT 269343 | || || | || | | || | | ||||| || || |||||||| | | | Sbjct 839159 GCTAGAT-ATCTCTTCAACTGTAATTTTC----GTAAAAGGAGTTGCATCACCCTCCAAT 839213 Query 269344 CCTTTAATAGCACATACTTTTCCTAATAGACATTCAATCAATTGTCCAATGGTCATACGT 269403 |||| ||| || || |||| || | ||||||||||| || || ||||| |||||||| Sbjct 839214 CCTTGAATTGCGCACGCTTTGCCAAGCAGACATTCAATTAAATGGCCAATTGTCATACGC 839273 Query 269404 TTTGGCATACAATTAGGATTAATAATAATATCTGGCACAAGTCCAGATTTAGTAAATGGC 269463 || ||| || |||||| |||||||| ||||| | || ||| || ||||||||| Sbjct 839274 GAAGGAATAGCATGAGGATTCATAATAATGTCTGGAATAATCCCATCTTGTGTAAATGGC 839333 Query 269464 ATATC 269468 ||||| Sbjct 839334 ATATC 839338 Score = 122 bits (134), Expect = 6e-22 Identities = 133/177 (75%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 480593 ATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTG 480652 ||| || |||| ||||||||| |||||| | ||||||||||||||| || ||||| || Sbjct 548151 ATTGTAGTCAGATAGAGTTCTACCATCTTCCAATTGCTTTCCAGCAAAGATCAGACGCTG 548210 Query 480653 TTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 ||||||||||||||| || ||||| || || |||||| || ||| ||||||||||| Sbjct 548211 TTGATCAGGAGGAATACCCTCCTTATCCTGGATCTTTGCCTTTACATTCTCAATAGTATC 548270 Query 480713 AGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || | ||| | || || || || || || | ||| || || |||||||| Sbjct 548271 GGAAGGTTCAACTTCCAATGTGATGGTCTTTCCTGTTAAAGTTTTGACAAAAATTTG 548327 >seq10 Length=178539 Score = 147 bits (162), Expect = 1e-29 Identities = 132/166 (80%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 817098 TAGATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAA 817157 ||||||| ||||| ||||| ||||| || ||||||||| |||||||||| |||||||||| Sbjct 153306 TAGATTTCTCATCACCAAACATTGCCAAAGAAATGCATGTTGGACACTTAAGATCTACAA 153365 Query 817158 TAATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACAAAGAATAA 817217 | |||||||| | |||||||| ||||| || |||| ||||||| |||| | | Sbjct 153366 TTATTGGTGATACAACATGTAGAATTCTTGAATATTTAGGATTTGAAGTATTAAGAGTTA 153425 Query 817218 ATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCATA 817263 |||| |||| |||||||| || |||||||| ||| | |||| ||| Sbjct 153426 ATCACGTTGGAGATTGGGGTACTCAATTTGGCATGCTTATTGAATA 153471 >seq9 Length=412584 Score = 141 bits (156), Expect = 6e-28 Identities = 338/505 (67%), Gaps = 17/505 (3%) Strand=Plus/Minus Query 355249 CCAGTGCCAATACCTTCTGTTCCATTAACTAAAATCATTGGAATTACAGGTACATAAAAT 355308 || || ||||| || || || ||||| || |||||||||||||||| || || ||| || Sbjct 219974 CCTGTACCAATTCCATCAGTACCATTTACCAAAATCATTGGAATTATTGGAACGTAATAT 219915 Query 355309 ACTGGTTCAATCATTTTATTATCTTCAAATTGAT--GTTGCAATACATCAAAATCATGTT 355366 | |||||||| || ||| ||| || || ||| |||| | | |||| | Sbjct 219914 AAAGGTTCAATTTGTTGTCCATCATCATATAAATAAGTT--AATAAAGGATCATCAGCCT 219857 Query 355367 GTATGAAAATATATTTAGTTAATTGATTGAGTTGTGTGAAGATATATCGTGCA---CTTG 355423 | |||||||||| |||| ||| | || | || || ||||| || ||| |||| Sbjct 219856 CTGGGAAAATATATCTAGTCCATTTAGATAGCTTAGTAAATATATAACGAGCAGCACTTG 219797 Query 355424 CATTATCTTTGCCTCCACTTAATCTTGTACCAAATTGACCATTGGGAAGTAATAAATTTA 355483 ||| |||| || || | ||| |||||||||||||| || ||||| ||||| Sbjct 219796 CAT---CTTTTCCACCTTCTTTTCTACTACCAAATTGACCACATGGTTCTAATAGATTTA 219740 Query 355484 TGTTGTTACTTCCAACATAATTTTGTGCCATTTTTATTATAGTTTCAGTCATTGACTGTT 355543 || |||||||||||| ||||||| ||||| || | ||||| || ||| || Sbjct 219739 GATTATTACTTCCAACAAAATTTTGAGCCATATTAACAATAGTACTTTGCAATGATGATT 219680 Query 355544 CTCCATGATGATATTTAGTTCTTTTCGAAACTGCACCTTGTAATTCAGATACTTTAATTT 355603 ||||||||||||| | | || | ||| ||| ||||| | ||||||| Sbjct 219679 CTCCATGATGATAAGCACTATGTTCAGCAACATAACCAGCTAATTGTGCAACTTTAA--- 219623 Query 355604 CTTCTTTATAAATACCTTCTTCCTCTGAACCATACAATACTTTTCTTTGAGATGGTTTAA 355663 ||| |||| || || || || || | | |||||||||||| ||||| | Sbjct 219622 GTTCATTATTAAGCTTTTTTTTAAATGTTGCAAAAAGTACTTTTCTTTGTCCAGGTTTTA 219563 Query 355664 GACCGTCAGCTATGTTAGGTATTGATCTCATATTATC--ATCGACTGAAAATGAAATAAG 355721 ||| || || || || || ||||| || |||| ||| ||| |||| | | ||| Sbjct 219562 AACCATCTAATAAATTTGGAATAGATCTAGTAGTATCATATCTACT--AAATAATACAAG 219505 Query 355722 TTCGCGATGAATAAAATCATAATAT 355746 ||| ||||||||||||| ||||| Sbjct 219504 TTCTTTATGAATAAAATCAAAATAT 219480 >seq7 Length=886684 Score = 123 bits (136), Expect = 2e-22 Identities = 149/199 (75%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 480572 AAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTT 480631 ||||| ||| | ||| || || ||||||| |||||||| ||| || | ||| || Sbjct 559520 AAGTGGACTCTTTTTG--AATGTTGTAATCAGAGAGAGTTCTACCATCCTCTAATTGTTT 559463 Query 480632 TCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTG 480691 ||| ||||| || | ||||||||||||||| || ||||||||||| |||||||||||| Sbjct 559462 TCCTGCAAAGATCAAACGTTGTTGATCAGGTGGGATTCCTTCCTTATCTTGAATCTTTGC 559403 Query 480692 TTTGACAGCTTCAATAGTATCAGTGTG-TGAAGTTTCAAGGGTAATAGTTTTACCGGTGA 480750 || ||| ||||| ||||| | | | || || ||| | | ||||| || || || | Sbjct 559402 CTTAACATTCTCAATTGTATCTGAAGGCTCAACTTCCAAAG-TGATAGTCTTTCCTGTCA 559344 Query 480751 GAGTCTTAACGAAAATTTG 480769 ||||||||||||||| || Sbjct 559343 AAGTCTTAACGAAAATCTG 559325 Score = 120 bits (132), Expect = 2e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 480572 AAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTT 480631 ||||| ||| | ||| || || ||||||| |||||||| ||| || | ||| || Sbjct 559064 AAGTGGACTCTTTTTG--AATGTTGTAATCAGAGAGAGTTCTACCATCCTCTAATTGTTT 559007 Query 480632 TCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTG 480691 ||| ||||| || | ||||||||||||||| || ||||||||||| |||||||||||| Sbjct 559006 TCCTGCAAAGATCAAACGTTGTTGATCAGGTGGGATTCCTTCCTTATCTTGAATCTTTGC 558947 Query 480692 TTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAG 480751 || ||| ||||| ||||| | || | ||| | || ||||| || || || | Sbjct 558946 CTTAACATTCTCAATTGTATCTGAAGGTTCAACTTCCAAAGTGATAGTCTTTCCTGTCAA 558887 Query 480752 AGTCTTAACGAAAATTTG 480769 ||||||||| ||||| || Sbjct 558886 AGTCTTAACAAAAATCTG 558869 Score = 114 bits (126), Expect = 8e-20 Identities = 133/177 (75%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || || |||| |||||||| ||| || | ||| ||||| ||||| || | ||||||| Sbjct 559272 TTGTAGTCAGAGAGAGTTCTACCATCCTCTAATTGTTTTCCTGCAAAGATTAAACGTTGT 559213 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713 |||||||| || ||||| ||||| |||||||||||| || ||| ||||| ||||| Sbjct 559212 TGATCAGGTGGGATTCCCTCCTTATCTTGAATCTTTGCCTTAACATTCTCAATTGTATCT 559153 Query 480714 GTGTG-TGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | | | || || ||| | | ||||| || || || | ||||||||||||||| || Sbjct 559152 GAAGGCTCAACTTCCAAAG-TGATAGTCTTTCCTGTCAAAGTCTTAACGAAAATCTG 559097 >seq2 Length=1232092 Score = 113 bits (124), Expect = 3e-19 Identities = 247/367 (67%), Gaps = 16/367 (4%) Strand=Plus/Minus Query 894979 AATaaaaaaaTGGATTCTGATCTTGATAAAATAAAAGATGTAGGTTTATATTTCATTGAA 895038 ||||| || |||| | ||||||||| ||||| || ||| ||| ||||||| || | Sbjct 610163 AATAATAAGATGGGTGGTGATCTTGAAAAAATTAAGATTGTTGGTGAATATTTCGTTCAC 610104 Query 895039 GTTTTTAAAGCATGTGGTATTAATATGTCTGAAACAAAGTTTATTTGGTCAAGTGATTTA 895098 | | || || || || ||||| | | || ||| ||||| || |||||| Sbjct 610103 ATATGGAAGGCTGCAGGAATGGATATGACAAATGTAAGATTTGTTTGGGCATCTGATTTT 610044 Query 895099 TTTAATA---AAAATCCTGAAAAATATTTTACAAGATTGTTAGATATTTCCGAAGAAACC 895155 ||||| || || || | | |||| |||| | || |||||||| ||||| Sbjct 610043 ATTAATGGGGAAGATTCTAATGAGTATTGGTTAAGAGTTTTTGATATTTCT--AGAAAGT 609986 Query 895156 TC--TCTTTCCAGGAGTAAAAGATGTTGTCAAATTATGGGTCGAAAAGACGGAGATGAAT 895213 | | || | || | |||||||||||| ||||||||||| || |||| |||||| Sbjct 609985 TTAATATTACTAGAATTAAAAGATGTTGCCAAATTATGGGAAGACAAGAAAATGATGAAC 609926 Query 895214 TATCTGTTTCTCAAATTATTTATCCTTGCATGCAAGTTGCAGATATTTTTGAACTCGAAC 895273 | | | || | | ||||||| ||||||||| ||| ||||| || ||||| Sbjct 609925 AACCGTGTGCTTCAGTATTTTATCCATGCATGCAATGTGCTGATATATTCCAACTC---- 609870 Query 895274 CTGAAGGAATAGATATTTGTCAATTAGGTGTTGATCAACGTAAAGTTAATATGCTCGCTC 895333 |||| ||||||||| || |||||| | |||||| | |||||||| ||||| ||| Sbjct 609869 ---AAGG--CAGATATTTGCCAGTTAGGTATGGATCAAAGAAAAGTTAACATGCTTGCTA 609815 Query 895334 TCGAATA 895340 ||||| Sbjct 609814 GAGAATA 609808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268178427892664