Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001305415.1_202015-10- 01] 18 sequences; 9,001,535 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq12 605 4e-168 seq1 408 6e-109 seq7 170 3e-37 seq2 111 2e-19 seq4 102 1e-16 >seq12 Length=162451 Score = 605 bits (670), Expect = 4e-168 Identities = 1114/1607 (69%), Gaps = 47/1607 (3%) Strand=Plus/Plus Query 195295 TCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGA 195354 || |||||||||||| |||||||| || || ||||||||||||||||||||| ||| || Sbjct 147744 TCCAGCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAACGA 147803 Query 195355 TCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTT 195414 | |||||| ||| | || || || ||||| ||||||||||| ||||| || || || || Sbjct 147804 TACTGTAGATATTGTTCCAAACGATCAAGGTAACCGTACAACACCATCATATGTAGCATT 147863 Query 195415 TACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTAT 195474 |||||| | ||| ||||| |||| ||||| ||||| || || |||| ||||| Sbjct 147864 TACAGAAACTGAGCGTCTTATTGGTGATGCAGCAAAGAACCAAGTTGCTAGAAACCCAGA 147923 Query 195475 CAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCA 195534 ||||| || ||||| || || |||||||||||| | |||||| ||| || ||| || Sbjct 147924 AAATACAGTTTTTGATGCTAAACGTCTTATTGGTAGAAAGTTTGATGATCAGGCAGTACA 147983 Query 195535 AGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGAT 195594 | ||||| | ||||| | | | |||| ||| ||| || ||||| || || Sbjct 147984 AAGTGATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGACAAGCCAATCAT 148043 Query 195595 TAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGT 195654 | ||| | | ||||| ||||| |||| | | ||||||||||| ||||||| Sbjct 148044 CAGTGTAAACTACTTAGGTGAAAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGT 148103 Query 195655 GTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGT---AAAACTGTGAAAGATGC 195711 || ||||||||||||| | ||| | | | ||||| ||| | ||| | || Sbjct 148104 TTTACAAAAGATGAAGGAGATCTCTGAAGCATACTTGGGTCGCCAAATTAAGAACGCTGT 148163 Query 195712 AGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGC 195771 |||| ||||| || ||||| |||| ||| ||||| || || || |||||||| || | Sbjct 148164 AGTT---ACTGTTCCAGCTTATTTCAATGACTCACAGCGTCAAGCAACAAAGGATGCAGG 148220 Query 195772 TGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTG 195830 ||| ||||| ||| | || ||| | ||||| || || || ||||| || ||||| |||| Sbjct 148221 TGCAATTGCTGGTTTGAA-TGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTG 148279 Query 195831 CTTATGGTCTGGACAAGAACAAGGAC-GAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889 |||||||||| || ||||| | | || | || | ||||||||||||||| ||| | ||| Sbjct 148280 CTTATGGTCTTGATAAGAA-AGGAACTGGCGAGAGAAATGTATTGATCTTCGATTTAGGT 148338 Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949 |||||||| |||||||| ||| | | | |||||||| |||||| || ||||| || ||| Sbjct 148339 GGTGGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTTAAAGCT 148398 Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGT--CATT 196007 || |||||||||||||| | |||||||||||||| ||| | || ||| ||| Sbjct 148399 ACCGCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAACAGACT----CGTAGAATT 148454 Query 196008 -TGTCT-GATGAGTTCCGTCGAAAGAATA-AG--AAAGATATTTCTGGAAATCCTAGGGC 196062 ||| | | || ||| ||||||||| || | ||| | | |||| |||| || Sbjct 148455 CTGTGTACAAGATTTCAAGAGAAAGAATAGAGGTATGGATTTAACCACAAATGCTAGAGC 148514 Query 196063 TCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCA 196122 | | | | || || ||| ||| || ||||| || ||||| | || ||| | |||| Sbjct 148515 TTTAAGAAGACTCAGAACTCAATGCGAGCGTGCAAAGAGAACTTTGTCATCTTCTACTCA 148574 Query 196123 AACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACA---ACTATTAC 196179 | | | ||||| | ||||| | | ||| || ||||| ||| || | || | Sbjct 148575 AGCTACAATTGAGTTAGATTCACTCTATGAAGGTATTGA---TTATTCAGTTGCCATCAG 148631 Query 196180 CCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTT--TAGGAAGTGTATGGAACCTGTT 196237 | || | || ||||| | | |||||| || | || | || | || ||| Sbjct 148632 TAGAGCTAGATTCGAAGAACTCTGCGCTGATTACTTCCGTGCAACTTTA--GCTCCAGTT 148689 Query 196238 GAACAAGTACTTCGTGACGCAAAGATGGATAAG---TCTAAGGTTGATGAAATTGTCCTT 196294 || ||||||| || || ||||| ||| ||| || |||| |||| | Sbjct 148690 GAGAAAGTACTCAAGGATGCTGGTATGGACAAGAGATCT---GTACATGATGTTGTATTG 148746 Query 196295 GTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAAT 196354 || || || || || |||||||| ||| |||| || || ||||| || | Sbjct 148747 GTTGGTGGTTCTACACGTATTCCAAAGGTTCAGGCCTTGATTCAGGAATTCTTTAACGGT 148806 Query 196355 AAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAG 196414 ||||| | |||| | ||||| || || ||||| |||||||||||||| || || || Sbjct 148807 AAAGAGCCATGCAAAGCAATCAATCCAGACGAAGCTGTTGCTTATGGTGCTGCTGTACAA 148866 Query 196415 GCTGCTATTCTCTCAGGTGTTGA-CAAT--AATAACGTCCAAGATCTTCTGCTACTTGAT 196471 ||||||| ||| | || ||| |||| | ||| || ||||| | || | ||| Sbjct 148867 GCTGCTA---TCTTAAATGGTGAGCAATCCTCTGCCGTACAGGATCTCTTATTATTGGAT 148923 Query 196472 GTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGAT 196531 ||||| || |||| || ||| | ||||| || |||||||||||||| || ||||||| Sbjct 148924 GTTGCTCCATTATCACTCGGTTTAGAAACTGCTGGTGGTGTTATGACCAAGCTTATTGAA 148983 Query 196532 AGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAA 196591 | || |||||||| || | |||||| ||||||||| | || ||| | ||||| || Sbjct 148984 CGTAATACAACTATCCCAGCAAAGAAGACACAAGTCTTCACTACTTATGCTGATAACCAG 149043 Query 196592 CCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTA 196651 ||||| || ||||| ||||| || || | || | |||||||||||||| Sbjct 149044 AGTGGTGTCTTGATCCAAGTTTATGAGGGTGAGAGAGCCATGACTAAGGATAACCATCTC 149103 Query 196652 CTTGGAACTTTCGAT-TTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAA 196710 || |||| ||| || |||| || |||||| | ||||| |||||||| ||||| ||| | Sbjct 149104 CTCGGAAAGTTCCATCTTGA-TGGTATTCCACCAGCACCAAGAGGTGTACCACAAATTGA 149162 Query 196711 TGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTC 196770 || ||| ||||| || || ||||| || | || || | |||| || ||| | | Sbjct 149163 AGTCACCTTTGATATTGATGCTAATGGTATCTTGAATGTGTCTGCTGTTGATAAGAGTAC 149222 Query 196771 TGGCAA-ATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAA 196829 ||| || | | | ||||| ||||| || || ||||| | | || ||||| || | Sbjct 149223 TGGTAAGAGCAG-CAAGATCACTATTACTAACGATAAGGGTAGATTATCAAAGGACGATA 149281 Query 196830 TTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAG 196876 |||||||||||||| | ||||| || || |||| || || || ||| Sbjct 149282 TTGAACGTATGGTTAATGATGCTGAGAAATACAAGGGTGAGGATGAG 149328 >seq1 Length=1283549 Score = 408 bits (452), Expect = 6e-109 Identities = 1052/1576 (67%), Gaps = 56/1576 (4%) Strand=Plus/Plus Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357 || |||||||||||||||||| |||||||| |||||||||||| | | | |||| | | Sbjct 82238 AGTTATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAG 82297 Query 195358 TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417 ||||||||||| || ||||| ||||| || |||| || ||||| || || | || || Sbjct 82298 AGTAGAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCAC 82357 Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAA 195477 ||| |||| | | |||| || | || || ||||| | |||| || || | | Sbjct 82358 TGATGATGAGAGATTGATTGGTGAATCAGCCAAGAATCAAGCTACTATCAATCCAGTTCA 82417 Query 195478 TACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGA 195537 ||| | || || | ||| | ||||||||||| ||| |||| | |||||| | Sbjct 82418 GACTTTGTTCGATGTAAAGAGACTTATTGGTCGTCGCTTTAAGGATGATTCCGTCCAAAA 82477 Query 195538 CGATATAAAGGACTGGTCT----TATGAAGTTGTTCCCGGTG-TGGCTGATAAGCCTATG 195592 |||| |||| || ||||| || || | | | || |||||| Sbjct 82478 GGATAA----GACTTTGCTACCATATGAGATTATTAACAAAGATAGC----AAGCCTTAC 82529 Query 195593 ATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATG 195652 || | ||| || | ||||||||||| ||||| || || ||||| |||| ||||| Sbjct 82530 ATACAAGTTTCTGTTAAGGGTGAGAAGAAGCAATTAGCCCCAGAAGAGGTTTCAGCTATG 82589 Query 195653 GTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCA 195712 || ||| | ||||||||||| | ||| || ||| | ||||| || || ||||| Sbjct 82590 GTCTTGGTCAAGATGAAGGAAATTGCTGAGGCTTATCTCGGTAAGGAAGTAAAGCATGCA 82649 Query 195713 GTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCT 195772 ||| | ||||| || |||||||| | |||| | || || ||||| || ||||| |||| | Sbjct 82650 GTTATTACTGTCCCAGCTTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGT 82709 Query 195773 GCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGC 195831 |||||||| ||| | || ||| || | ||||| ||||| |||||||| || |||||||| Sbjct 82710 GCTATTGCCGGTTTGAA-TGTAATTCGTATTATTAATGAGCCAACAGCAGCAGCAATTGC 82768 Query 195832 TTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGG 195891 || |||| |||||||||| || ||||| | | || | | ||| | ||||| Sbjct 82769 TTTTGGTTTGGACAAGAAGGCTGA-GAAGAGCA-----TTTTAGTATACGATTTGGGTGG 82822 Query 195892 TGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTAC 195951 |||||| |||||||| || || | | ||||| ||| | ||||| || ||||| Sbjct 82823 TGGTACTTTTGATGTTTCTCTCTTGACCATTGATAACGGTGTTTTCGAGGTCGTTGCTAC 82882 Query 195952 TGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGT 196010 ||||||||| ||| | || ||||| ||||||||| | || | || ||| | Sbjct 82883 AAGTGGTGATACCCATTTGGGAGGTGAGGATTTCGATCAGAGAGTTATGGACCACTTTAT 82942 Query 196011 C-TGATGAGTTCCGTCGAAAGAATAAGAAA-GAT---ATTTCTGGAAATCCTAGGGCTCT 196065 | ||| | | ||| |||| | | |||| ||| | |||| || || || || Sbjct 82943 CAAGATCA-TCAAGTC-AAAG-ACAGGAAAGGATGTAAAGTCTGACAA---GAGAGCCCT 82996 Query 196066 TCGTCGGCTTAGGACTGCATGTGAACGTGCCAAA-CGAACTCTCTCTTCTACGGCTCAAA 196124 || |||||||| | | || | | |||| || |||| ||||| | | ||| Sbjct 82997 TCAGAAGCTTAGGAGAG-AGGTCGAGAAGTCAAAGAGAGCTCTTTCTTCAGCTCCACAAG 83055 Query 196125 CAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTG 196184 | ||| |||||||| ||| | || | | || || ||| | ||| | | Sbjct 83056 TTAAGGTCGAGATTGAAGGTTTGATGGAGGATGTAGATTTGAGCGAAACCTTGACCAGAG 83115 Query 196185 CACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAG 196244 | || || ||||| || |||| ||||| || ||| ||| || || ||| || ||| Sbjct 83116 CTAAATTCGATGAGTTGAATGCTGACTTGTTCAGAAAGACTATCGAGCCAGTT-AAGAAG 83174 Query 196245 TACTTCG-TGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGA 196303 || | || || || | |||||| | || ||||| || || | || || || Sbjct 83175 GTTTTGGAGGATGCTGGAATCAAAAAGTCTGAAGTAGATGAGATCGTTTTGGTTGGTGGT 83234 Query 196304 TCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAG--CTTCTTCAATAATAAAGATT 196361 || || ||||| || ||||||||| || || || ||||| || || || Sbjct 83235 TCTACTCGTATCCCTAAGATTCAAGCCTTG--ATCAAGGAGTTCTTTGATGGAAAGGAGC 83292 Query 196362 TAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTA 196421 ||||| | || ||||| |||||||| || ||||||||||| ||||| || |||| || Sbjct 83293 CAAACAGAGGAATTAACCCAGATGAAGCCGTCGCTTATGGTGCTGCCGTACAAGCTGGTA 83352 Query 196422 TTCTCTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCG 196481 | | |||||| | | || | ||| | | || | |||||| | || Sbjct 83353 TCTTAGCAGGTGAAGGCGGTAGT---------GATTTATTATTATTGGATGTTACTCCTT 83403 Query 196482 TATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAA 196541 || | | ||| |||| || | ||||| |||||||| || | |||| ||| ||||| Sbjct 83404 TAACTTTAGGTATTGAGACTGTTGGTGGAGTTATGACAAAGCTCATTGGTAGAAACACTG 83463 Query 196542 CTATTCCGACTAAGAAGGAACAAGTCTTTTCA--ACGTATTCCGATAATCAACCAGGTGT 196599 | |||| || |||||| |||| |||||| || || |||||||| |||| ||| Sbjct 83464 TTGTTCCAACCAAGAAGAGCCAAG--TTTTCAGTACTTACCAAGATAATCAGCCAGCTGT 83521 Query 196600 TCATATTCAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAA 196658 | ||| || || ||||| || || || ||| || | ||||||||| |||| ||||||| Sbjct 83522 ACTTATCCAGGTTTATGAGGGTGAGCG-TCCAATGACTAAGGATAACAATCTCCTTGGAA 83580 Query 196659 CTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCT 196718 ||||| | | || || ||| | || || ||||||||||| || ||| | ||| | Sbjct 83581 AATTCGAGCTTTCTGGAATCCCACCAGCTCCAAGAGGTGTTCCCCAAATTGAGGTTACTT 83640 Query 196719 TCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAAT 196778 | || || || | |||| ||| || | || | || |||| |||| | |||| |||| Sbjct 83641 TTGAAATTGATACTGATGGTATTTTACAAGTTAGTGCAAAGGATAAGGGTACTGGTAAAT 83700 Query 196779 CTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTA 196838 |||| |||||| || || ||||| ||||| | || || |||| || || || |||| Sbjct 83701 CTGAGAAGATTACTATCACAAATGATAAGGGTAGACTCTCACAGGAAGACATAGAGCGTA 83760 Query 196839 TGGTTCAAGATGCGGA 196854 || || | || || || Sbjct 83761 TGATTAAGGAGGCTGA 83776 >seq7 Length=886684 Score = 170 bits (188), Expect = 3e-37 Identities = 175/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 171861 TATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920 |||||| || ||||| || || | || ||||| |||||||| | || ||||| | || Sbjct 558865 TATGCAGATTTTTGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTC 558924 Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980 ||| ||||| || || | || || |||||||||||||||||||| || ||||| ||||| Sbjct 558925 AGATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAAGGAATCCCACCTGATCA 558984 Query 171981 GCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAA 172040 ||||| | || ||||| || ||||| | || ||||| | || ||| |||||||||| Sbjct 558985 ACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAA 559044 Query 172041 CGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | ||||||| ||||| ||| ||||| | || || || ||| | |||||| Sbjct 559045 CATTCAAAAAGAGTCCACTTTACACTTAGTCCTGAGACTTAGAGGTGGT 559093 Score = 167 bits (184), Expect = 3e-36 Identities = 176/232 (76%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| || || || || || | || ||||| |||||||| | || |||||| Sbjct 559317 GTGGTATGCAGATTTTCGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAGC 559376 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| ||||| || || | || || |||||||||||||||||||| || ||||| | Sbjct 559377 CTTCAGATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAAGGAATCCCACCTG 559436 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 |||| ||||| | || ||||| || ||||| | || ||||| | || ||| |||||| Sbjct 559437 ATCAACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATT 559496 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| ||||||| ||||| ||| ||||| | || || || ||| | || || Sbjct 559497 ACAACATTCAAAAAGAGTCCACTTTACACTTAGTCCTGAGACTTAGAGGCGG 559548 Score = 154 bits (170), Expect = 2e-32 Identities = 159/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| || || || || || | || ||||| |||||||| | || |||||| Sbjct 559089 GTGGTATGCAGATTTTCGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAGC 559148 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| ||||| || || | || || ||||||||||||||||| || || ||||| | Sbjct 559149 CTTCAGATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAGGGAATCCCACCTG 559208 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 |||| ||||| | || ||||| || ||||| | || ||||| | || ||| |||| | Sbjct 559209 ATCAACAACGTTTAATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGACT 559268 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACA 172064 ||||| ||||||| ||||||||| |||| Sbjct 559269 ACAACATTCAAAAAGAGTCTACTTTACA 559296 >seq2 Length=1232092 Score = 111 bits (122), Expect = 2e-19 Identities = 1145/1828 (63%), Gaps = 46/1828 (3%) Strand=Plus/Plus Query 77870 GACTTTGAATTTGGGTATTTTGGATTGAAGACTCTCGAAAAAAGTTACCTGCAGTACATG 77929 || ||||||| | ||||||| || || ||||| |||| | || || | | || Sbjct 371708 GATTTTGAATACGATTATTTTGCCTTCAAAACTCTAGAAAGATCCTATCTTCTTAAAATT 371767 Query 77930 GATGGAAAGCTCATGGAGACACCTCAATACTTATTCATGCGTGTTTCTATTGGTATTCAT 77989 || || | |||| | ||| ||| | | | ||||| || ||| |||||||||| Sbjct 371768 GACAACAAAGTTGTGGAAAGACCACAACATCTTCTGATGCGGGTCTCTTGTGGTATTCAT 371827 Query 77990 GGAAATGATATTCCAGCGGTACTTGAAACGTATGATAAAATGTC-CAATGGTATGTTTAT 78048 | ||||||| ||| | ||||||||| ||||| | || ||| ||| |||| Sbjct 371828 TGTGGTGATATTGAAGCTGCACTTGAAACATATGAGTTGTTATCGCAAAAATAT-TTTAC 371886 Query 78049 TCACGCAACACCTACTTTGTTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTT 78108 ||| |||||||| || | |||||| |||| ||||| || || || |||||||||||||| Sbjct 371887 TCATGCAACACCCACACTCTTTAATTCAGGCACTCCACGACCTCAAATGTCATCTTGTTT 371946 Query 78109 CCTACTTGCAAATAAGGAGGACTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGC 78168 |||| | | || || || || || ||||| | | || || || | || || Sbjct 371947 TTTACTCAGGATTCCAGAAGATTCAATAAACGGTATCTTTGACACACTAACTAAATGCGC 372006 Query 78169 TCAGATTTCTAAGTGGGCTGGTGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACAA 78228 | ||| |||| || |||||| | || | | || || | | ||| Sbjct 372007 AAACATTAGTAAGACTGCGGGTGGTCTTGGGGTGGCAGTGAGTAATATTAGAG-GAACTG 372065 Query 78229 GTCCA-GGATTAGAGGAACTAATGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTAT 78287 || || ||| ||||||| ||||| ||| ||||| | ||||| ||||| | || | Sbjct 372066 GTTCATATATTCGAGGAACAAATGGGAGATCTAATGGATTAATTCCGATGCTGCGCGTTT 372125 Query 78288 TCAATGCTACAGCACGCTATGTCAACCAAGCGGGTCGTAGG----AAGGGGTCATTCGCT 78343 |||| || || | ||| | | |||| || | | | |||| | |||| || Sbjct 372126 ATAATGACACTGCTAGGTATATTGATCAAGGTGGAGGGAAGCGTAAAGGTGCCATT-GCA 372184 Query 78344 ATGTACCTTGAACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAG 78403 || || | || || ||||||| ||||| | || ||| | ||| | | || || Sbjct 372185 ATTTATTTGGAGCCGTGGCACGTTGATGTTGTAGAGTTTATTGAAATCAGGAAGAATCAC 372244 Query 78404 GGTGACGAGGAAGCTCGATGCAGGGATTTATTCACTGCTATGTGGATTCCGGATCTTTTT 78463 || | || || |||| | ||| | || |||| | ||| |||| ||||| || Sbjct 372245 GGAAAGGAAGAGATGAGATGTCGCGATCTCTTTCCTGCCCTTTGGGTTCCTGATCTGTTC 372304 Query 78464 ATGAAGAGAGTTGAGGAAGGAGGTA-AATGGTCTCTTTTCTGTCCAGATAAGACTAAGGG 78522 ||| | |||||||| |||||| | | ||| |||| | || |||||| | | |||| Sbjct 372305 ATGGAAAGAGTTGA-GAAGGATCAAGATTGGACTCTAATGTGCCCAGATGA-ATGCAGGG 372362 Query 78523 TCTTTC-AGATGTATACGGGGAAGAATTCGAAAAATTGTACACTAAATACGAAGAGGAAG 78581 || | |||||| | || || || || | || | || | || || | ||| Sbjct 372363 GATTGCAAGATGTTTGGGGCGATGATTTTAAGAAGCTATATGAAGAGTATGAGAAACAAG 372422 Query 78582 GTCTCGCTATTAAGACAATTGATGCATCTGAACTATGGAAAGCTATTATCAAAAG-TCAA 78640 | | | | || || || | || |||| ||| || | | | | | |||| Sbjct 372423 GCCGTGGAAGGAAAACGATGAAAGCGCAGAAACTTTGG-TTCTTAATCTTACAGGCTCAA 372481 Query 78641 ACAGAGACCGGCACCCCGTATATGCTATACAAAGACAGCTG-TAACAGAAAGTCTAACCA 78699 | ||||| || || || | ||| || ||||| |||| || || || |||||| Sbjct 372482 ATTGAGACGGGGACACCATTTATTTGTTATAAAGA-TGCTGCAAATAGCAAAAGTAACCA 372540 Query 78700 AAAGAACCTAGG---TGTCATCAAAAGCTCTAACCTTTGCACAGAAATTCTGGAATACAC 78756 || || | || | | | ||| |||| | ||||||||||| | |||||||| Sbjct 372541 GAAAAATTTGGGAACTATTGTTTCAAG---TAACTTATGCACAGAAATCATAGAATACAC 372597 Query 78757 GGATAAGAATGAAACAGCTGTATGTAATCTAGGGTCTATCGCTCTACCAAAGTTTGTTGA 78816 | | | ||| || || |||||||| | |||||| | || ||||| || ||||| Sbjct 372598 TAGCACGGACGAAGTTGCCGTCTGTAATCTGGCGTCTATTGGCCTTCCAAAATTCGTTGA 372657 Query 78817 TCGAGAATTA-AAGACATTTGATTATTCAAAGCTCCACGAAATTACAAAAATCGTAACTA 78875 | | ||| | ||||| ||||||| | ||| | | ||| |||| || | | || | Sbjct 372658 T-AAAAATAACAAGACGTTTGATTTTGATAAGTTAAAAGAAGTTACGAAGGTGATTACGA 372716 Query 78876 AAAATTTAAATCGTGTAATTGACCGTAACTACTACCCAGTC-GAGACTGCTAAATATTCT 78934 ||||| ||| | |||||| | || || | || ||| || |||| | || Sbjct 372717 GGAATTTGAATAAATTGATTGACGTTGGATATTATTCTCTCAAAGAGTG-TAAAAAATCG 372775 Query 78935 AATATGAAACATAGACCAATTGGTCTAGGTGTTCAAGGATTGGCAGA-TGTATTCAACTT 78993 ||| | | |||| | ||| | || | || ||||||| | ||||| ||| || | | Sbjct 372776 AATTTAAGACATCGTCCATTGGGGATTGGCATTCAAGGGCTCGCAGACTGT-TTTATGAT 372834 Query 78994 GTGTGGTCTTCCCTTCGATTGCGAAGATTCAAGGACTATGAATGCTCATATTTTCGAGAC 79053 | | || | || | ||| | || | | | || | ||| || ||||| || Sbjct 372835 GCTTCGTATGCCGTACGAGTCTGAGGGAGCTAAGAAGTTAAATAAACAAATTTTTGAAGT 372894 Query 79054 TATTTATCATGCAGCTTTAGAAGCAAGTTCAGAACTTGCTGAAATTAATGGGCCTTATGA 79113 ||| ||| |||||||| | || || || | || ||||| |||| | ||||| || || Sbjct 372895 TATCTATTATGCAGCTCTCGACGCTAGCTGTGAGCTTGCAGAAAAATACGGGCCATACGA 372954 Query 79114 GAGTTTCGAGGGTTCACCCGCTTCACAAGGTCTTCTTCAACCAGATCTATGGGAAGGTGA 79173 | | ||||| || || | ||| || | ||| ||| | |||| || | Sbjct 372955 AACATATTCCGGTTCGCCTGCGAGTAAGGGTATTTTACAATTTGATATGTGGGGAGTTAC 373014 Query 79174 AGCTAAATACAGTGGTCGTTACGATTGGGA--TGCAATGAGAAAGCGTGTAATGACGAAG 79231 | | | || ||| | || |||||||| ||| ||| || | | || | Sbjct 373015 ACC---AGACTCTGGACTTTGTGATTGGGATTTGCTTAAAGATAGGATTTCCAAAC--AT 373069 Query 79232 GGTCTGAGAAACAGTCTTCTCGTAGCACCAATGCCCACTGCTTCGACGGCTCAGATCCTC 79291 ||| | | || ||| | || | |||||||| || || || || | || || | Sbjct 373070 GGTATTCGTAATTCTCTATTAATATCTCCAATGCCAACAGCATCCACTTCGCAAATTTTA 373129 Query 79292 GGTAATAATGAGTGTTTTGAACCATACACTACAAACATATATCTTCGTCGCACATTAGCT 79351 ||||| |||||| ||||||| |||| || | ||||| |||| |||| | | || || Sbjct 373130 GGTAACAATGAGAGTTTTGAGCCATTTACCTCGAACATTTATCATCGTAGAGTACTATCT 373189 Query 79352 GGTGAATTTGTTGTGGTTAACAAACATCTTGTTGAA-GATTT-GAAGAAGTTAGGTCTTT 79409 ||||| || |||| || || ||| ||| | || ||||| ||| || ||| | Sbjct 373190 GGTGAGTTCTTTGTAGTAAATCCGCAT-TTGCTAAATGATTTACTAGAGCTTGGGTTATG 373248 Query 79410 GGTCAAAAGAGATGAA--AGACT-TAATGGTCAAAGCCGGAGGGAGTGTGCAAAACATAG 79466 || | || | | || ||| | | || | |||| || ||| | ||||| ||| Sbjct 373249 GGATGATAG-GCTTAAGCAGAATATTATTG-CAAA--TAATGGCAGTATTCAAAATATAC 373304 Query 79467 TAGAGATACCAGATAATATTAAAAATCTTTATAAGACTGTTTGGGAAATTAGCCAAAAAT 79526 | || || || |||| | |||||||||||||| |||||||||| ||||| Sbjct 373305 TTACAATTCCGGAAGATATACGCGAGCTTTATAAGACTGTATGGGAAATTAAGCAAAAGA 373364 Query 79527 GTATTATCGACATGGCAGCGGACAGGGGTCGTTTTATCTGTCAATCACAATCTATGAATT 79586 | || || ||||| || || ||||||| | | | |||||||| |||||| |||| Sbjct 373365 CAGTAATTGATATGGCTGCAGATAGGGGTCCATATGTTTGTCAATCGCAATCTTTGAACA 373424 Query 79587 TGTTTTTAGAGTCACCTACAATTGGAAAAATATCCTCTATGCACATGTATGCGTGGAAGT 79646 | | | || ||| ||| ||| |||| |||||||| | |||| ||||| Sbjct 373425 TTCATATGGAAAATGCTAACTTTGCAAAGTTATCATCTATGCATTTTTATGGTTGGAAAA 373484 Query 79647 CTGGACTCAAGACAGGTATGTACTACTT 79674 || || || ||||| || || || || Sbjct 373485 AAGGTCTAAAAACAGGCATTTATTATTT 373512 >seq4 Length=891386 Score = 102 bits (112), Expect = 1e-16 Identities = 200/296 (68%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 196454 GATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTT 196513 |||||| || |||| || ||| ||||| |||| | ||| ||||||| |||||| ||| Sbjct 652444 GATCTTTTGTTACTCGACGTTACACCCTTATCTTTAGGTATTGAAACTTTGGGTGGAGTT 652385 Query 196514 ATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCA 196573 | ||| | | ||| | || || || || || || ||||| ||| ||||| || || Sbjct 652384 TTTACTCGATTAATTAACAGAAATACCACAATACCTACTAAAAAGAGCCAAGTATTCTCC 652325 Query 196574 ACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGT 196633 || | | || |||||| | ||| ||| |||| | |||||||| | | Sbjct 652324 ACTGCTGCAGACAATCAAACTCAAGTTGGAATTAAAGTTTTCCAAGGAGAAAGAGAATTT 652265 Query 196634 GCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGA 196693 || ||||| | | |||||| || || ||| ||| ||||| | ||||||||| Sbjct 652264 GCTGCTGATAATAAGTTGCTTGGACAATTTGAAATGATGGGAATTCCTCCAGCACCCAGA 652205 Query 196694 GGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGT 196749 || || || || ||| | || ||| ||||| || |||||||||||| | || || Sbjct 652204 GGGGTACCTCAAATTGAAGTCACCTTTGATATTGATGCAAATGGAATTATGAATGT 652149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862251980960