Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001305435.1_202015-10- 01] 18 sequences; 9,283,240 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq7 105 6e-18 seq1 87.8 2e-12 >seq7 Length=866811 Score = 105 bits (116), Expect = 6e-18 Identities = 165/235 (70%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 26764 ACAAA-ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAA 26822 ||||| ||||| | ||||| || || || || ||||| | ||||| | ||| | ||| Sbjct 570810 ACAAATATGCAGATTTTTGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAA 570869 Query 26823 TCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCC 26882 | || || || ||| | || || ||||||| || || ||||| || || || Sbjct 570870 CCTTCAGATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAAGGAATCCCACCT 570929 Query 26883 GATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGAC 26942 ||||||||| | | || | | || |||||| | || |||| ||||| || || Sbjct 570930 GATCAACAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGAT 570989 Query 26943 TATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || |||||||||||||| || ||| | || | ||||||||||||||||| |||| Sbjct 570990 TACAACATTCAAAAAGAGTCCACTTTACACTTAGTCCTGAGACTTAGAGGCGGAA 571044 >seq1 Length=1284088 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 26763 AACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAA 26822 || || |||||| | ||||| ||||| ||||| ||||| | ||||| | ||| | ||| Sbjct 551706 AAGAAGATGCAAATTTTTGTCAAAACTTTAACAGGAAAGACCATCACATTGGAAGTTGAA 551647 Query 26823 TCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCC 26882 | ||| || || ||| | || || |||||| || || || || || ||||| Sbjct 551646 CCTTCCGATACTATTGAGAATGTAAAGGCAAAGATCCAGGATAAGGAGGGTATTCCTCCT 551587 Query 26883 GATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGAC 26942 |||||||| | || || | | || || ||| | ||||||| ||||| | ||| Sbjct 551586 GATCAACAGCGTCTGATCTTTGCTGGAAAGCAATTGGAAGATGGTAGAACTCTATCTGAC 551527 Query 26943 TATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || || || || || || ||| | ||| | || | ||||||||||| || Sbjct 551526 TACAATATCCAGAAGGAGTCCACTTTGCATTTAGTATTAAGACTTAGAGGCGG 551474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478662292300960