Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001305435.1_202015-10- 01] 18 sequences; 9,283,240 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq7 84.2 2e-11 >seq7 Length=866811 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 || || |||| || |||||||||||||| |||||||| | || | | ||| ||| Sbjct 571024 ACTAAGTGTAAAGTGGACTCTTTTTGAATGTTGTAATCAGAGAGAGTTCTACCATCCTCT 570965 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 | |||||||| || ||||||| || || ||||| || || || || ||||| | | || Sbjct 570964 AATTGTTTTCCTGCAAAGATCAAACGTTGTTGATCAGGTGGGATTCCTTCCTTAT-CTTG 570906 Query 127025 ATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 | | | || ||| | | || | || || | | || ||||| | || | || || Sbjct 570905 AATCTTTGCCTTAACATTCTCAATTGTATCTGAAGGTTCAACTTCCAAAGTGATAGTCTT 570846 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||| ||| || |||||||||||||| Sbjct 570845 TCCTGTCAAAGTCTTAACAAAAATCTGCAT 570816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500693012320