Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001305435.1_202015-10- 01] 18 sequences; 9,283,240 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq12 242 1e-58 seq1 163 1e-34 seq7 152 2e-31 seq4 152 2e-31 seq9 140 1e-27 seq11 107 8e-18 seq15 89.7 2e-12 seq3 87.8 7e-12 >seq12 Length=159205 Score = 242 bits (268), Expect = 1e-58 Identities = 481/701 (69%), Gaps = 16/701 (2%) Strand=Plus/Plus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 ||| ||||| |||||| | || ||||| | |||||||| ||||| | ||| | | Sbjct 152018 AGCTATTGGTATTGATTTAGGTACCACATACTCATGTGTTGGTGTATGGAGAAACGATAC 152077 Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTAC 451032 |||||| ||| | |||| || ||||| || || || || |||| ||| ||||| Sbjct 152078 TGTAGATATTGTTCCAAACGATCAAGGTAACCGTACAACACCATCATATGTAGCATTTAC 152137 Query 451033 GGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAA 451090 || | || | ||| | || | || || || | ||| || | ||| | || Sbjct 152138 AGAAACTGAGCGTCTTATTGGTGATGCAGCAAAGAACCAA--GTTGCTAGAAACCCAGAA 152195 Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150 || ||||| | ||||||||||||| | ||||| | | || ||||||| | | |||||| Sbjct 152196 AATACAGTTTTTGATGCTAAACGTCTTATTGGTAGAAAGTTTGATGATCAGGCAGTACAA 152255 Query 451151 AAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAA---TCAAAAAGGAAAGCCCTATATT 451207 | || | | || | | | | ||||| | || ||| | ||||| || | Sbjct 152256 AGTGATATGACTCACTGGCCATTTAAAGTAGTTAGAGGTCCAAAGGACAAGCCA-ATCAT 152314 Query 451208 CAA-GTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGT 451266 || ||||| || |||||||| || || | ||||||||||||| ||||||| Sbjct 152315 CAGTGTAAACTACTTAGGTGAAAAGAAGGAATTCCATGCTGAAGAAATTTCTGCTATGGT 152374 Query 451267 TCTTACTAAA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCC-AGTTACTGATGCA 451324 | |||| ||| ||||| || | | ||| ||| |||| || || | ||| | || Sbjct 152375 T-TTACAAAAGATGAAGGAGATCTCTGAAGCATA-CTTGGGTCGCCAAATTAAGAACGCT 152432 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 ||| |||||||||| |||||||||||||| |||| || |||||||| || |||||||| Sbjct 152433 GTAGTTACTGTTCCAGCTTATTTCAATGACTCACAGCGTCAAGCAACAAAGGATGCAGGT 152492 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 ||||||||||| ||||| | |||| ||||| || || || ||||||||| | || Sbjct 152493 GCAATTGCTGGTTTGAATGTAATGAGAATCATTAACGAGCCAACTGCAGCTGCTATTGCT 152552 Query 451445 TATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGT 451504 ||||| || | || |||| ||| | || | |||| | || | || ||||| ||| Sbjct 152553 TATGGTCTTGATAA---GAAAGGAACTGGCGAGAGAAATGTATTGATCTTCGATTTAGGT 152609 Query 451505 GGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCA 451564 || || ||| |||| || || | | ||||||||||| | |||||||| || || Sbjct 152610 GGTGGTACTTTTGATGTATCATTATTAACTATTGAAGATGGTATTTTTGAAGTTAAAGCT 152669 Query 451565 ACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||| |||||||||||| | || ||||||||| ||||||| Sbjct 152670 ACCGCTGGTGATACTCACTTGGGTGGTGAAGATTTTGATAA 152710 >seq1 Length=1284088 Score = 163 bits (180), Expect = 1e-34 Identities = 454/690 (66%), Gaps = 15/690 (2%) Strand=Plus/Plus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 ||||| || ||| | || || || | ||||||||| ||| | ||| | ||||| | ||| Sbjct 79722 ATTGGTATCGATTTAGGTACTACTTATTCATGTGTTGGTATCTACAAGAATGGTAGAGTA 79781 Query 450977 GAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGAT 451036 || ||||| ||||||| ||||| || | ||| || |||| ||| || || ||| Sbjct 79782 GAGATTATTCCAAATGAACAAGGTAATCGTATTACACCATCATATGTATCATTCACTGAT 79841 Query 451037 TCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAAAAACA 451094 || ||| | | || || | || || ||||| | || |||| | | | | Sbjct 79842 GATGAGAGATTGATTGGTGAATCAGCCAAGAATCAA-GCTACTATCAA-TCCAGTTCAGA 79899 Query 451095 CAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAG 451154 | | | |||| || | | ||||| ||| | | | |||||| | || ||||| | Sbjct 79900 CTTTGTTCGATGTAAAGAGACTTATTGGTCGTCGCTTTAAGGATGATTCCGTCCAAAAGG 79959 Query 451155 AGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTAA 451214 | || | || | | ||||| | | || || | | ||||| || || ||||| Sbjct 79960 ATAAGACTTTGCTACCATATGAGATTATTAACAAAGATAGCAAGCCTTACATACAAGTTT 80019 Query 451215 ATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTA 451274 | ||| ||||| | || || || || ||||| ||||| ||||||| ||| | Sbjct 80020 CTGTTAAGGGTGAGAAGAAGCAATTAGCCCCAGAAGAGGTTTCAGCTATGGT-CTTGGTC 80078 Query 451275 AA-ATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 || ||||| |||| || || ||| | ||| ||| | ||||||| |||||| Sbjct 80079 AAGATGAAGGAAATTGCTGAGGCTTATCTCGGTAAGGAAGTAAAGCATGCAGTTATTACT 80138 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || || ||||| || |||||||| || || || || || || ||||| || |||||| Sbjct 80139 GTCCCAGCTTACTTTAATGATGCTCAGCGTCAGGCTACCAAGGATGCTGGTGCTATTGCC 80198 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTA 451453 ||||| ||||| |||| ||||||||||| || |||||||| || | || | ||| | Sbjct 80199 GGTTTGAATGTAATTCGTATTATTAATGAGCCAACAGCAGCAGCAATTGCTTTTGGTTTG 80258 Query 451454 GGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACT 451513 | | ||||| | || || | |||||||||| ||||| ||||| || ||| Sbjct 80259 G-------ACAAGAA--GGCTGAGAAGAGCATTTTAGTATACGATTTGGGTGGTGGTACT 80309 Query 451514 CATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGT 451573 |||| |||| | | | ||||| | || || || || || || || | |||| Sbjct 80310 TTTGATGTTTCTCTCTTGACCATTGATAACGGTGTTTTCGAGGTCGTTGCTACAAGTGGT 80369 Query 451574 GATACTCATCTAGGAGGTGAAGATATTGAT 451603 ||||| ||| | |||||||| ||| | ||| Sbjct 80370 GATACCCATTTGGGAGGTGAGGATTTCGAT 80399 Score = 120 bits (132), Expect = 1e-21 Identities = 161/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || ||||| | || || || || || || | || |||||| | || Sbjct 551700 ATGCAAATTTTTGTCAAAACTTTAACAGGAAAGACCATCACATTGGAAGTTGAACCTTCC 551641 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | | || ||| || || |||||||| || ||||||||||||||| Sbjct 551640 GATACTATTGAGAATGTAAAGGCAAAGATCCAGGATAAGGAGGGTATTCCTCCTGATCAA 551581 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || || | || || ||| | |||||||| |||||| | | || || ||| Sbjct 551580 CAGCGTCTGATCTTTGCTGGAAAGCAATTGGAAGATGGTAGAACTCTATCTGACTACAAT 551521 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | ||||| | || | || |||||||||||||| ||||| Sbjct 551520 ATCCAGAAGGAGTCCACTTTGCATTTAGTATTAAGACTTAGAGG 551477 Score = 109 bits (120), Expect = 2e-18 Identities = 129/172 (75%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 412289 TTCCAAAACGACCACTTCTACCAATTCTATGTATAAAAGTTTCATGATTTTTAGGTAAAT 412348 ||||||| | |||||||| ||||||| ||| ||| | ||| | ||| |||||| || Sbjct 898611 TTCCAAATCTGCCACTTCTTCCAATTCGATGGATATATAATTCTTTATTAATAGGTAGAT 898552 Query 412349 CATAATTTATAACTAATTTAACCTCAGGAATATCTATCCCCCGTGCTAATAAATCAGTTG 412408 | || |||| |||||| || || | | | ||| || || | | | ||||||| |||| Sbjct 898551 CGTAGTTTACAACTAAGTTGACTTGTTGTACATCAATACCTCTTCCCCATAAATCTGTTG 898492 Query 412409 TTAATAAAATTCGTGTTTTTCCCTCTCTAAATTCATCTACAATTTTACTTCT 412460 | | ||||| |||||||||||| |||||||| || ||| |||| || ||||| Sbjct 898491 TAATTAAAACTCGTGTTTTTCCTTCTCTAAACTC-TCT-CAATATTTCTTCT 898442 >seq7 Length=866811 Score = 152 bits (168), Expect = 2e-31 Identities = 168/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| ||||| || |||| || || ||||| ||| | || |||||| | || Sbjct 570816 ATGCAGATTTTTGTTAAGACTTTGACAGGAAAGACTATCACTTTGGAAGTTGAACCTTCA 570875 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | |||| ||| |||||||||||||||||||| || ||||||||| Sbjct 570876 GATACAATTGAGAATGTTAAGGCAAAGATTCAAGATAAGGAAGGAATCCCACCTGATCAA 570935 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || |||| |||||| | || ||||| |||||| | | ||||| || Sbjct 570936 CAACGTTTGATCTTTGCAGGAAAACAATTAGAGGATGGTAGAACTCTCTCTGATTACAAC 570995 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | || | |||||||| | ||||| ||||| Sbjct 570996 ATTCAAAAAGAGTCCACTTTACACTTAGTCCTGAGACTTAGAGG 571039 >seq4 Length=1031078 Score = 152 bits (168), Expect = 2e-31 Identities = 232/330 (70%), Gaps = 9/330 (3%) Strand=Plus/Minus Query 451274 AAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 |||||||||||||| || ||| ||| ||||| || | |||| || |||||| Sbjct 786696 AAAATGAAAGAAACTGCCGAAACTTATCTTGGTAGAGGTGTAAAGCATGCTGTTATTACT 786637 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || || ||||| || |||||| | || || ||||||||||| ||||| || ||| || Sbjct 786636 GTGCCAGCTTACTTTAATGATTCTCAGCGTCAAGCAACTAAGGATGCTGGCTCTATAGCA 786577 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTA 451453 || |||||||| |||| |||||||| || |||||||| ||||| ||||| ||| | Sbjct 786576 GGCTTAAATGTAACAAGAATCATTAATGAGCCAACAGCAGCGGCTCTTGCATACGGAAT- 786518 Query 451454 GGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACT 451513 ||||| || |||| | |||| || ||| | |||||| || ||||| ||| Sbjct 786517 GGAAA--------AAGCAGATGGCAAAACAATCGCAGTTTATGATTTGGGAGGAGGTACT 786466 Query 451514 CATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGT 451573 |||| |||| | | ||| | || || |||||||| || ||||| |||||| Sbjct 786465 TTCGATATTTCTATTTTAGAGATTCTTGGCGGAGTGTTTGAAGTTAAAGCAACTAATGGT 786406 Query 451574 GATACTCATCTAGGAGGTGAAGATATTGAT 451603 | ||| |||||||| ||||| ||||| Sbjct 786405 AACACTTCCCTAGGAGGAGAAGACTTTGAT 786376 >seq9 Length=398675 Score = 140 bits (154), Expect = 1e-27 Identities = 299/443 (67%), Gaps = 9/443 (2%) Strand=Plus/Plus Query 364565 TATTCCATCTTTAGTTGATGGATTTAAACCTTCTCAAAGAAAAATTTTTTATGGAGCAAA 364624 ||||||| |||| | ||||| || |||||| ||||||||| | ||| || | || Sbjct 216355 TATTCCAAATTTATTAGATGGTTTAAAACCTGGACAAAGAAAAGTACTTTTTGCAACA-- 216412 Query 364625 TTTAAGAGGATTAGAAAAAGATCAAGTAAAAGTAGCTCAATTAGCAGGTTTTGTATCTGA 364684 ||||| | | || | || || | ||||| || |||||||| |||| ||| |||| Sbjct 216413 TTTAAAAAAAAGCTTAATA-ATGAACTTAAAGTTGCACAATTAGCTGGTTATGTTGCTGA 216471 Query 364685 CCGGGTAGCTTATCATCACGGTGAGGCAAGTTTAATGGGAGCAATAATTGGAATGGCACA 364744 | ||||||||||| || || || || | | || || ||||| || Sbjct 216472 ACATAGTGCTTATCATCATGGAGAATCATCATTGCAAAGTACTATTGTTAATATGGCTCA 216531 Query 364745 AAATTTTGTTGGAAGTAATAATGTAAATTTACTAGAACCAAAAGGACAATTTGGAAGTCG 364804 |||||||||||||||||||||| ||||| || |||||||| || |||||||| ||| | Sbjct 216532 AAATTTTGTTGGAAGTAATAATCTAAATCTATTAGAACCATGTGGTCAATTTGGTAGTAG 216591 Query 364805 AGTAATGGGAGGTAAAGATTC---TGCCAGCCCACGTTATATTTGGACCAAACTTGAAAA 364861 | | || || |||||| | ||| | |||||||| | || || || || Sbjct 216592 AAAAGAAGGTGGAAAAGATGCAAGTGC---TGCTCGTTATATATTTACTAAGCTATCTAA 216648 Query 364862 AGTGGCAGGATTAATATTTAGAAAAGAAGATAATCCAATTTTAAATTATATTAATGATGA 364921 | | | ||| || || | | | ||| |||| | |||| |||| | ||||||| Sbjct 216649 ATGGACTAGATATATTTTCCCAGAGGCTGATGATCCTTTATTAACTTATTTATATGATGA 216708 Query 364922 TGGATTAATGGTTGAACCTGAATTTTATCTTCCTATTATTCCTATGATTTTAGTAAATGG 364981 |||| | |||||||| || ||| |||| || ||||| |||||||| |||||||| Sbjct 216709 TGGACAACAAATTGAACCTTTATATTACGTTCCAATAATTCCAATGATTTTGGTAAATGG 216768 Query 364982 AGCAACAGGCATTGGTACTGGTT 365004 | || |||||||| |||| Sbjct 216769 TACTGATGGAATTGGTACAGGTT 216791 Score = 134 bits (148), Expect = 5e-26 Identities = 401/597 (67%), Gaps = 40/597 (7%) Strand=Plus/Plus Query 363743 AGGAATTCCTAAACTAGAAGATGCTAATAAAGCAGGAACAAAAGATGCTCATAAATGTGG 363802 |||||| || ||||| |||||||| || |||| || | || || | |||||| Sbjct 215545 AGGAATCCCAAAACTTGAAGATGCAAACGAAGCTGGTGGACCCCATTCTAAAAAATGTAC 215604 Query 363803 A-TTATATTTAGCAGAGGGAGATTCTGCTCT---TTCTATGATTCTGTCAGGGTTATCAA 363858 ||||| ||| | || || ||||||||| |||| || ||| |||| ||||| | Sbjct 215605 TCTTATACTTA-CTGAAGGTGATTCTGCTAAAACTTCT-TG--TCTTGCAGGATTATCTA 215660 Query 363859 GTAAAGATAGAAATTTTTATGGTGCCTTTCCGTTAAAAGGAAAATTATTAAATGTAAGAG 363918 | | |||| | | || ||| | ||||| || || ||| | |||||||| |||| Sbjct 215661 TTGTTGGTAGAGACTATTTTGGAGTATTTCCACTACGTGGTAAACTTTTAAATGTTAGAG 215720 Query 363919 AAGCATCAGTTAAACAAATTATGGGAAATGATGAGATATCAAACCTTaaaaaaaTTTTAG 363978 |||| ||| |||||||| || || |||| ||| ||| ||| || ||||| || | Sbjct 215721 AAGCTTCATTTAAACAACAAATTGGTAATGTTGAAATACAAAATATTCTTAAAATATTGG 215780 Query 363979 GATTACGTAATGAATTTAAATATGAAATGGATGAAGAATTTAATACTTTAAGATATGGAA 364038 ||||| ||| || | |||||||| | ||| | | | ||| ||||||||||| Sbjct 215781 GATTAGGTATTGGACAAAAATATGATA---ATGGACCAGTCAAT---TTAAGATATGGTT 215834 Query 364039 AAGTAATAATTTTATGTGATTCAGATGTAGATGGAAGTCATATTAAGGGACTAATTTTAA 364098 |||| | | |||| |||| ||||| ||||||||||| ||||| ||| | | Sbjct 215835 CTTTAATGCTAATGACTGATCAAGATCATGATGGTAGTCATATTAAAGGACTCATTATTA 215894 Query 364099 ATATGTTTCA-TAGTATGTGGCCTAATCT-TTTAAAAAGAGAAGGTT-TTATTACAACTA 364155 || | | || || ||| ||||| | | | || | ||| | || ||| |||| | Sbjct 215895 ATTTAATACATTATTAT-TGGCCAAGTTTAATTCATTTTAGAGGATTCTTAAAACAA-TT 215952 Query 364156 TGAACACTCCAATTGTTAAAGCAACAAAAGGA---AAAGAAATATTAAAATTTTATAATT 364212 || | ||||| ||||||||||| | ||||||| || ||||| | || | || || Sbjct 215953 TGTA-ACTCCTATTGTTAAAGCTAAAAAAGGATCTAATGAAATCT---CGTTCTTTACTT 216008 Query 364213 TAACTGATTATGATAATTGGAGAAATGATAAT------AATACAAAAGGATATTATATT- 364265 || ||| ||||| | |||||||| ||||| || ||| |||| | ||| Sbjct 216009 TATATGAATATGAACAATGGAGAAAGAATAATTCATCAAACTTAAATGGAT-GGAGATTC 216067 Query 364266 AAATATTACAAAGGATTAGGAACATCT---GATTCTAAAGAAGCTAAAGAATATTTT 364319 || ||||| ||||| ||||| |||||| || ||| ||| |||||| |||||| Sbjct 216068 AAGTATTATAAAGGTTTAGGTACATCTACAGA-TCT--TGAATTTAAAGAGTATTTT 216121 Score = 120 bits (132), Expect = 1e-21 Identities = 144/195 (74%), Gaps = 3/195 (2%) Strand=Plus/Minus Query 96115 TACTTTACTAATGTTTAATGCTGGGCTCCAGTTATTTTTTAAAATATCTAAACAAATTGC 96174 |||| | |||| |||| || ||||||||| || |||||||||||| || ||||| || Sbjct 58663 TACTGTTCTAAGAGTTAAAGCAGGGCTCCAGGCATCTTTTAAAATATCCAAGCAAATAGC 58604 Query 96175 ACCTGT---AGTACTAATATTTGGATGATAAATAGGAGTTTTAAATATAATTTTAGGAGG 96231 ||||| | || |||||| ||||| |||| || | ||| ||| ||| ||||| Sbjct 58603 TCCTGTTTGACTAGAAATATTCGGATGCCAAATTCTTGTGATGAATTTAACTTTTGGAGG 58544 Query 96232 CTTATATGGATAGTCTTCAGGAAAAGTAATTTCTAATTGGAATACTCCACCCTCATAGGG 96291 || |||||||| |||| || | | |||| || | |||||||| ||||| ||||| || Sbjct 58543 CTCGTATGGATATTCTTTTGGTACAATAATATCAAGTTGGAATATACCACCTTCATATGG 58484 Query 96292 TGTTCCTGAAGGGCC 96306 ||||||| ||| || Sbjct 58483 TGTTCCTATAGGCCC 58469 >seq11 Length=183517 Score = 107 bits (118), Expect = 8e-18 Identities = 128/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 248791 ATTTTCATTGGTCCTATGTTTTATTTGAGACTTAAACATATGGTACTTGATAAAGTTCAT 248850 ||||| |||| ||||| | ||| | | | ||||||||||| || |||||| | ||| Sbjct 45107 ATTTTTGTTGGGCCTATTTATTACCAAAAATTGAAACATATGGTTCTCGATAAAATGCAT 45166 Query 248851 TCCAGAAGTATGGGTCCTAGACAAGCTATTACTAGACAACCCATGGAAGGACGTTCTAAA 248910 | ||| | | ||||||||||||| | |||| |||||||||| |||||| | ||||| Sbjct 45167 GCAAGAGGAAGGGGTCCTAGACAAATTCTTACCAGACAACCCACTGAAGGAAGATCTAAG 45226 Query 248911 GATGGAGGTCTTAAAATTGGAGAGATGGAAAAAGATGCAATGGTTGCTCATGGA 248964 |||||||| || |||| || ||||||| |||| | || ||| ||||| Sbjct 45227 GATGGAGGACTACGTCTTGGTGAAATGGAAAGAGATTGTTTAGTAGCTTATGGA 45280 >seq15 Length=82225 Score = 89.7 bits (98), Expect = 2e-12 Identities = 168/242 (69%), Gaps = 10/242 (4%) Strand=Plus/Minus Query 420706 CCAAATGTATCAATTCCTCTTCTTCCAGCTCGTCCTGCCATTTGAAGAAATTCATCAGTT 420765 ||||| |||||||| |||||||||||||||| ||||| |||||| | ||||| | Sbjct 77614 CCAAAAGTATCAATACCTCTTCTTCCAGCTCTTCCTGACATTTGTGTATATTCAGAA--- 77558 Query 420766 CGTAAGAA-TCTTCTA---CCACAATCATCATATTTAGATAAT-CCAGTAAATACAACAG 420820 | ||||| | ||||| | |||||||||| |||| | ||||||||||| || Sbjct 77557 -GAAAGAAGTATTCTATTTTTTCGTCCATCATATTT-TTTAATACTAGTAAATACAATAG 77500 Query 420821 TTTTTGTAGGCATATTTACACCAACAGAAAAAGTTTCAGTTGCTAACAAAACTTTAATTA 420880 | | | || ||| | || | ||| | || |||||||| || || ||||| |||| Sbjct 77499 ATCTAGCTGGACAATTAATTCCCATAGATATTGTCTCAGTTGCAAATAATACTTTGATTA 77440 Query 420881 AtttttttGAATAAAGAATTTCAACAATTTCTTTTAAAATAGGAATTATACCAGAATGAT 420940 || | | | | | | || ||| |||||||| | ||| |||| || ||| ||||| Sbjct 77439 ATCCTCTAGTAAATAAGATCTCAGTCATTTCTTTGATAATTGGAAGCATTCCACTATGAT 77380 Query 420941 GA 420942 || Sbjct 77379 GA 77378 >seq3 Length=1187293 Score = 87.8 bits (96), Expect = 7e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 420714 ATCAATTCCTCTTCTTCCAGCTCGTCCTGCCATTTGAAGAAATTCATCAGTTCGTAAGAA 420773 ||||| ||||||||||| |||| || |||||||| ||| || ||| ||| || Sbjct 491217 ATCAAGACCTCTTCTTCCTGCTCTACCACTCATTTGAATAAACTCTCCAG-AGTTAACAA 491275 Query 420774 TCTTCTACCACAAT-CATCATATTTAGATAATCCAGTAAATACAACAGTTTTTGTAGGCA 420832 | | ||| | | ||||| |||| | | |||||| | ||| ||||||| ||||| Sbjct 491276 TTCTGTACTCCTTTCCATCAAATTTTCTAAGTGAAGTAAAGATAACCGTTTTTGCAGGCA 491335 Query 420833 TATTTACACCAACAGAAAAAGTTTCAGTTGCTAACAAAACTTTAATTAAtttttttGAAT 420892 | || | || | ||||||||| || || | || | |||||||| ||| | | | Sbjct 491336 TGTTAATTCCCATAGAAAAAGTCTCTGTAGAGAATAGTACTTTAATAAATGACTCTCCAA 491395 Query 420893 AAAGAATTTCAACAATTTCTTTTAAAATAGGAATTATACCAGAATGATGA 420942 |||| | ||||| ||||| |||| || ||||| || ||| ||||||| Sbjct 491396 AAAGGAGCTCAACTATTTCCTTTACAACAGGAAGTAAACCTCCATGATGA 491445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975717944349944