Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001305435.1_202015-10- 01] 18 sequences; 9,283,240 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq12 416 4e-111 seq1 235 7e-57 seq2 223 4e-53 seq9 165 1e-35 seq4 107 2e-18 seq6 91.5 2e-13 >seq12 Length=159205 Score = 416 bits (460), Expect = 4e-111 Identities = 1103/1667 (66%), Gaps = 36/1667 (2%) Strand=Plus/Minus Query 6503 GTTCCTTTCATTTGATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGACCTTTTTCGCG 6562 |||||| ||| | ||| |||||| || | | ||||| ||||| | ||| | Sbjct 153662 GTTCCT--CATGTTATAGAGGTAGTTCTCCAAAGAGTTCTTAGCCTCAATCTTAAGTCTG 153605 Query 6563 TACTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCT 6622 | || ||||| ||| | || || || || ||||| | ||||| |||||| || || Sbjct 153604 TTCTGCTCATCCTCACCCTTGTATTTCTCAGCATCATTAACCATACGTTCAATATCGTCC 153545 Query 6623 TTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTA 6682 || |||||||| |||||||| || ||||| || ||||| | ||||| | |||| Sbjct 153544 TTTGATAATCTACCCTTATCGTTAGTAATAGTGATCTTGCTGCTCTTACCAGTACTCTTA 153485 Query 6683 TCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGT 6742 || ||||| |||||||| |||||||| ||||||| ||| || | || | ||||||| Sbjct 153484 TCAACAGCAGACACATTCAAGATACCATTAGCATCAATATCAAAGGTGACTTCAATTTGT 153425 Query 6743 GGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTA 6802 ||| ||| || ||||| | ||||||||| | || || | || || | | |||| Sbjct 153424 GGTACACCTCTTGGTGCTGGTGGAATACCATCAAGATGGAACTTTCCGAGGAGATGGTTA 153365 Query 6803 TCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCT 6862 ||| | | | | | ||||| ||||| |||| || || || || ||||| Sbjct 153364 TCCTTAGTCATGGCTCTCTCACCCTCATAAACTTGGATCAAGACACCACTCTGGTTATCA 153305 Query 6863 TGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACC 6922 || | ||||| |||| ||||| | ||| || || ||||| | ||||| | Sbjct 153304 GCATAAGTAGTGAAGACTTGTGTCTTCTTTGCTGGGATAGTTGTATTACGTTCAATAAGC 153245 Query 6923 GGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGT 6982 |||||||| |||||| |||||| | || || || | || | || ||||| | | Sbjct 153244 TTGGTCATAACACCACCAGCAGTTTCTAAACCGAGTGATAATGGAGCAACATCCAATAAT 153185 Query 6983 AACAGGTCTTGAACAG-ATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGC 7041 || || || || || | | | | || |||| ||||||| || ||||| || | || Sbjct 153184 AAGAGATCCTGTACGGCAGAGGATTGCT-CACCATTTAAGATAGCAGCTTGTACAGCAGC 153126 Query 7042 CCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATA 7101 || || || || || || || || || || | ||| | |||||||||||||| | Sbjct 153125 ACCATAAGCAACAGCTTCGTCTGGATTGATTGCTTTGCATGGCTCTTTACCGTTAAAGAA 153066 Query 7102 ATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTC 7161 ||| | || |||| || || || ||||| || ||||| ||||| || | || Sbjct 153065 TTCCTGAATCAAGGCCTGAACCTTTGGAATACGTGTAGAACCACCAACCAATACAACATC 153006 Query 7162 ATTCACTTTCGAT---TTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCAT 7218 || || ||| || || || | || ||| ||| || || || | | Sbjct 153005 ATGTACA---GATCTCTTGTCCATACCAGCATCCTTGAGTACTTTCTCAACTGGAGCTAA 152949 Query 7219 ACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGA---TGT 7275 | | |||||| | || || ||||| || || | || | | |||| || Sbjct 152948 AGTTGCACGGAAGTAATCAGCGCAGAGTTCTTCGAATCTAGCTCTACTGATGGCAACTGA 152889 Query 7276 ATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGA 7335 ||| ||||| || || || | ||||| | ||||| || | ||| | | || || Sbjct 152888 ATA---ATCAATACCTTCATAGAGTGAATCTAACTCAATTGTAGCTTGAGTAGAAGATGA 152832 Query 7336 TAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACC 7395 || |||| |||||| ||||| || |||| | | | | || | | || Sbjct 152831 CAAAGTTCTCTTTGCACGCTCGCATTGAGTTCTGAGTCTTCTTAAAGCTCTAGCATTTGT 152772 Query 7396 GGAAATATCTTT--CT-TATGTTTACGTTTAAACTCTT---CAGAGAAGTGTCGAAGGAG 7449 || | ||| | || ||| || | || || |||| || |||| | | | ||| Sbjct 152771 GGTTAAATCCATACCTCTATTCTTTCTCTTGAAATCTTGTACACAGAATTCT---ACGAG 152715 Query 7450 TCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAA 7509 ||| ||| |||||||||||||||||||| ||||| || ||||| ||||| |||||||| Sbjct 152714 TCTGTTATCAAAATCTTCACCACCCAAGTGAGTATCACCAGCGGTAGCTTTAACTTCAAA 152655 Query 7510 GATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAAT 7569 ||||| ||||||| |||| || || |||||||| ||||||||||| | || || || Sbjct 152654 AATACCATCTTCAATAGTTAATAATGATACATCAAAAGTACCACCACCTAAATCGAAGAT 152595 Query 7570 GAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGT 7629 | ||| || | ||| | | |||||||| ||||| || || ||||| || || || Sbjct 152594 CAATACATTTCTCTCGCCAGTTCCTTTCTTATCAAGACCATAAGCAATAGCAGCTGCAGT 152535 Query 7630 TGGTTCATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCG 7688 ||| || ||||| || | | ||| |||| |||||||| | | ||||| || || | Sbjct 152534 TGGCTCGTTAATGATTCTCATTACA-TTCAAACCAGCAATTGCACCTGCATCCTTTGTTG 152476 Query 7689 CTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCT 7748 |||| || || || || || || || || || || || || || |||| | | | || Sbjct 152475 CTTGACGCTGTGAGTCATTGAAATAAGCTGGAACAGTAACTACAGCGTTCTTAATTTGGC 152416 Query 7749 TACCGAGATACGATTCCGCGATATCTTTCAT-TTTGGTAAGAACCATCGATGAAATCTCT 7807 ||| | || | ||| | ||| || ||||| ||| |||| |||||| | ||||| ||| Sbjct 152415 GACCCAAGTATGCTTCAGAGATCTCCTTCATCTTTTGTAA-AACCATAGCAGAAATTTCT 152357 Query 7808 TCAGCCGCAAACTGTTTCGTTTCACCGTTAA--AATCAACTTCAATCATGGGTTTATCCG 7865 ||||| || | ||| ||||||| ||| | | || || || || || ||| Sbjct 152356 TCAGCATGGAATTCCTTCTTTTCACC--TAAGTAGTTTACACTGATGATTGGCTTGTCCT 152299 Query 7866 CAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCG 7925 | ||| | || ||| | | ||| | ||||||| ||| || || || Sbjct 152298 TTGGACCTCTAACTACTTTAAATGGCCAGTGAGTCATATCACTTTGTACTGCCTGATCAT 152239 Query 7926 AAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTG 7985 ||||||||| || |||||||| || |||||||||||||| |||| ||||| | || Sbjct 152238 CAAACTTTCTACCAATAAGACGTTTAGCATCAAAAACTGTATTTTCTGGGTTTCTAGCAA 152179 Query 7986 TTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACG 8045 ||||||||| || || || || |||||||| || | |||| ||||| || || || | Sbjct 152178 CTTGGTTCTTTGCTGCATCACCAATAAGACGCTC---AGTTTCTGTAAATGCTACATATG 152122 Query 8046 ATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGA 8105 |||| || || || || ||||| ||||| | || ||| ||||| |||||| ||| | Sbjct 152121 ATGGTGTTGTACGGTTACCTTGATCGTTTGGAACAATATCTACAGTATCGTTTCTCCATA 152062 Query 8106 CGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGA 8152 | || || || || || || || |||||||||||||| || ||| || Sbjct 152061 CACCAACACATGAGTATGTGGTACCTAAATCAATACCAATAGCTGGA 152015 >seq1 Length=1284088 Score = 235 bits (260), Expect = 7e-57 Identities = 802/1241 (65%), Gaps = 23/1241 (2%) Strand=Plus/Minus Query 6611 TCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTA 6670 || |||||||| | || | ||| ||||||||||| || || |||||||| || |||||| Sbjct 81235 TCTATGTCTTCCTGTGAGAGTCTACCCTTATCATTTGTGATAGTAATCTTCTCAGATTTA 81176 Query 6671 CCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTT 6730 || | ||||||| | ||||| || | |||||||||| | ||||| || || | Sbjct 81175 CCAGTACCCTTATCCTTTGCACTAACTTGTAAAATACCATCAGTATCAATTTCAAAAGTA 81116 Query 6731 ACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCA 6790 || | |||||| || ||| || || || | ||| || || | | || ||| | ||| Sbjct 81115 ACCTCAATTTGGGGAACACCTCTTGGAGCTGGTGGGATTCCAGAAAGCTCGAATTTTCCA 81056 Query 6791 AGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCA 6850 || | | |||||||| | | | | ||| ||||| ||||| || | || || || Sbjct 81055 AGGAGATTGTTATCCTTAGTCATTGGACGCTCACCCTCATAAACCTGGATAAGTACAGCT 80996 Query 6851 GGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTT 6910 || ||||||||||| || ||| | ||| ||||| | ||||| || ||| Sbjct 80995 GGCTGATTATCTTGGTAAGTACTGAAAACTTGGCTCTTCTTGGTTGGAACAACAGTGTTT 80936 Query 6911 CTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTC 6970 || ||| | | ||||||| ||||| | ||| || | || | || | ||| || Sbjct 80935 CTACCAATGAGCTTTGTCATAACTCCACCAACAGTCTCAATACCTAAAGTTAAAGGAGTA 80876 Query 6971 ACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCT 7030 || ||||| | ||| | || | | |||||||| | |||||| | ||| Sbjct 80875 ACATCCAATAATAATAAATCACTACCG---------CCTTCACCTGCTAAGATACCAGCT 80825 Query 7031 TGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTA 7090 || || | || || || ||||| || ||||| |||||||| | | || | || || Sbjct 80824 TGTACGGCAGCACCATAAGCGACGGCTTCATCTGGGTTAATTCCTCTGTTTGGCTCCTTT 80765 Query 7091 CCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACC 7150 || | ||| | ||| | || |||||| || ||||| || || || ||||| ||| Sbjct 80764 CCATCAAAGAACTCCTTGATCAAGGCTTGAATCTTAGGGATACGAGTAGAACCACCAACC 80705 Query 7151 AAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC-TCGAAGTGTTTTTTCGAC 7209 |||||||| |||| |||| || || | ||| | || || || || || || Sbjct 80704 AAAACGATCTCATCTACTTCAGACTTTTTGATTCCAGCATCCTCCAAAACCTTCTTA-AC 80646 Query 7210 AGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAAT 7269 || || ||| || | ||||||||| | || || || || || | ||| | Sbjct 80645 TGGCTCGATAGTCTTTCTGAACAAGTCAGCATTCAACTCATCGAATTTAGCTCTGGTCAA 80586 Query 7270 GGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGT 7329 || | ||||| || | || || ||||| || | | ||||| | Sbjct 80585 GGTTTCGCTCAAATCTACATCCTCCATCAAACCTTCAATCTCGACCTTAACTTGTGGAGC 80526 Query 7330 CGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGAC-GAAGGGCACGCG 7388 ||||| | | || ||||| ||| || | || ||| | | ||||||| | | Sbjct 80525 TGAAGAAAGAGCTCTCTTTGACTTCTCG-ACCTCTCTCCTAAGCTTCTGAAGGGCTCTCT 80467 Query 7389 GGTTACCGGAAATATC-TTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGG 7447 || | | ||| |||| | | ||| || | |||| | | ||||| | Sbjct 80466 TGTCAGACTTTACATCCTTTCCTGTCTTTGACTTGATGATCTTGATA-AAGTGGTCCATA 80408 Query 7448 AGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCA 7507 | |||| ||||||||| ||||| ||||| || ||||| || || || ||| || Sbjct 80407 ACTCTCTGATCGAAATCCTCACCTCCCAAATGGGTATCACCACTTGTAGCAACGACCTCG 80348 Query 7508 AAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAA 7567 || | ||| |||||| | || | ||||||||||| ||||||||||||| || | Sbjct 80347 AAAACACCGTTATCAATGGTCAAGAGAGAAACATCAAAAGTACCACCACCCAAATCGTAT 80288 Query 7568 ATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCC 7627 | | | | || | || | | |||| || | ||| | || || || || || Sbjct 80287 ACTAAAATGCTCTTCTCAGCCT------TCTTGTCCAAACCAAAAGCAATTGCTGCTGCT 80234 Query 7628 GTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGT 7686 ||||| |||||||||||||||| ||| |||| || ||||||| | ||||| || || Sbjct 80233 GTTGGCTCATTAATAATACGAATTACA-TTCAAACCGGCAATAGCACCAGCATCCTTGGT 80175 Query 7687 CGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTT 7746 || || || || | ||| |||||||| || ||||| || | || || | | | |||| Sbjct 80174 AGCCTGACGCTGAGCATCATTAAAGTAAGCTGGGACAGTAATAACTGCATGCTTTACTTC 80115 Query 7747 CTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTC 7806 |||||||||||| | || || || || ||||| ||| | ||||| | ||||| ||| Sbjct 80114 CTTACCGAGATAAGCCTCAGCAATTTCCTTCATCTTGACCAAGACCATAGCTGAAACCTC 80055 Query 7807 TTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTT 7847 ||| | || || || ||| | ||||| |||| | ||||| Sbjct 80054 TTCTGGGGCTAATTGCTTCTTCTCACCCTTAACAGAAACTT 80014 >seq2 Length=1237296 Score = 223 bits (246), Expect = 4e-53 Identities = 1153/1822 (63%), Gaps = 43/1822 (2%) Strand=Plus/Minus Query 104368 TAATACATACCCGTTTTTAAACCAGTTTTCCACGCGTACATGTGCATAGACGAAAGTTTT 104427 ||||| || || ||||||| ||| ||||||| | || | |||||||| || | ||| Sbjct 373879 TAATAAATGCCTGTTTTTAGACCTTTTTTCCAACCATAAAAATGCATAGATGATAACTTT 373820 Query 104428 GAAATTGTTGGACTCTCGAC--GAATAAGTTCATACTTTGACTTTGGTCTATATACACAC 104485 | || | | | | || | |||| ||||| | ||| ||| | ||| || Sbjct 373819 GCAAAGTTAGCATTTTCCATATGAAT--GTTCAAAGATTGCGATTGACAAACATATGGAC 373762 Query 104486 CTCTATCCGCCGCCATATCGATGATTGTTTTTTGACTCATTTCCCATACGGTTTTATACA 104545 | ||||| || |||||||| || | ||| ||||| | ||||||||||| || ||||| | Sbjct 373761 CCCTATCTGCAGCCATATCAATTACTGTCTTTTGCTTAATTTCCCATACAGTCTTATAAA 373702 Query 104546 ATTCCTTAAGATCATCGGGTATATCAATAATGTTTTGAACAGACCCATTTGCCTTCACCA 104605 || | ||| || || || || || ||||||| | ||||| || | | Sbjct 373701 GCTCGCGTATATCTTCCGGAATTGTAAGTATATTTTGAATACTGCCATTA---TTTGCAA 373645 Query 104606 TAAGATCTTTCATTT-CCTTCGA--CCAGAGTCCACGTTCTTTCAAATCGTTTACTAAAT 104662 ||| || | | | ||| | ||| | ||| | ||| ||||| |||| |||| Sbjct 373644 TAATATTCTGCTTAAGCCTATCATCCCATAACCCAAGCTCTAGTAAATCATTTAGCAAAT 373585 Query 104663 GTTTGTTTACGACGACAAATTCACCCGCGAGTGTTCGTCTCAAATAGATATTGGTCGTAT 104722 | ||||| || | || ||||| | ||| || | ||| || || | ||| Sbjct 373584 GCGGATTTACTACAAAGAACTCACCAGATAGTACTCTACGATGATAAATGTTCGAGGTAA 373525 Query 104723 ACGGTTCGAAACACTCGTTGTTCCCTAAAATCTGGGATGTGGATGCGGTAGGCATAGGTG 104782 | || || |||| ||| ||||| |||||||| || || |||||||| || ||||| || | Sbjct 373524 ATGGCTCAAAACTCTCATTGTTACCTAAAATTTGCGAAGTGGATGCTGTTGGCATTGGAG 373465 Query 104783 CAAGAAGAAGACTATTCATAGTTCCTTTCTTAACAAG------TTTACGCATGGCATTCC 104836 | | ||| ||| | | || | || || |||| ||| || || Sbjct 373464 ATATTAATAGAGAATTACGAATACCATGTTTGGAAATCCTATCTTTAAGCAA---ATCCC 373408 Query 104837 AATCGTATCGACCACTAAACTTTGG-GT--CTCGATCCCACATATCGAATTGAAGAATAC 104893 |||| | | ||| | | ||| || ||| |||||||||| ||||| | ||||| Sbjct 373407 AATCACAAAGTCCAG---AGTCTGGTGTAACTC---CCCACATATCAAATTGTAAAATAC 373354 Query 104894 CTTTACTAAACGGTGACCCCTTAAACGTTTCATAAGGACCGTACATTTCGGCAAGTTCAC 104953 | ||||| || || || | | ||||| || || ||||| |||| ||||| |||| Sbjct 373353 CCTTACTCGCAGGCGAACCGGAATATGTTTCGTATGGCCCGTATTTTTCTGCAAGCTCAC 373294 Query 104954 ACGACGATTCGAGTGATGCGTGGTAGATAGTTTCGAATATATCAATGTTGAGTTTTCTCG 105013 | | ||||| | ||| | |||||| ||| || || | | || | || | | Sbjct 373293 AGCTAGCGTCGAGAGCTGCATAATAGATAACTTCAAAAATTTGTTTATTTAACTTCTTAG 373234 Query 105014 ATTCTTCTGAACCGAATGTCATTCTTAACATGATAAACACGTCAGCGAGACCCTGAACAC 105073 | | || || || | | ||| | | ||| ||||| ||| ||||| || |||| | Sbjct 373233 CTCCCTCAGACTCGTACGGCATACGAAGCATCATAAAACAGTCTGCGAGCCCTTGAATGC 373174 Query 105074 CAATACCGATGGGTCTGTGACGCATATTTGAACGTTTCCCGTTTTCGGTTGGGTAAAAGT 105133 |||| || | || | || | | ||| || ||| | | || | | ||| | Sbjct 373173 CAATCCCCAATGGACGATGTCTTAAATTCGATTTTTTACACTCTTTGAGAGAATAATATC 373114 Query 105134 TTTTATCAATAACCTTGTTTAAGTTACGTGTAACCATTTTCGTAACACGATGTAACTCTT 105193 ||||| | || || || || | |||| || |||||||| | ||||| | Sbjct 373113 CAACGTCAATCAATTTATTCAAATTCCTCGTAATCACCTTCGTAACTTCTTTTAACTTAT 373054 Query 105194 CATGGTTAAACTCGTTCTTCTCGACATCAACGTATTTTGGTAACGCGATTGATGCGAGAT 105253 || | |||| || || | ||||||| ||||||| | | || || || |||| Sbjct 373053 CAAAATCAAACGTCTTGTTATTTTTATCAACGAATTTTGGAAGGCCAATAGACGCCAGAT 372994 Query 105254 TACATACGGCGGTTTCTTCCTTATCCGTAAACTCCAGAATTTCTGTACACAAATTTGATG 105313 |||| ||||| ||| ||| | || | || | |||||||| || || || || Sbjct 372993 TACAGACGGCAACTTCGTCCGTGCTAGTGTATTCTATGATTTCTGTGCATAAGTTACTTG 372934 Query 105314 ATTTAATCGTACCAACGTGTTTATGGTTCGACTTTTC--ATTACACGCGTCTTTGTAAAG 105371 | ||| || || | | ||| ||||| |||||| ||| || ||||| ||| Sbjct 372933 AAACAATAGTTCCCAAATTTTTCTGGTT--ACTTTTGCTATTTGCAGCATCTTTATAACA 372876 Query 105372 CATATATGGGGTTCCCGTTTCACTTTGGGATTTAATAATTGCTTTCCAAATCTCCGAAGC 105431 ||| |||| || ||||| ||| |||| | | | ||| ||||| | | || Sbjct 372875 AATAAATGGTGTCCCCGTCTCAATTTGAGCCTGTAAGATTAAGAACCAAAGTTTCTGCGC 372816 Query 105432 TGGTACAAC--TTTAGTTGCGATACCTTCAGATTCGTATTTCTCGTAAAGATCTTCAAAC 105489 | | || | ||| || | |||| || || | || || || | | ||| Sbjct 372815 T--TTCATCGTTTTCCTTCCACGGCCTTGTTTCTCATACTCTTCATATAGCTTCTTAAAA 372758 Query 105490 TCTTTACCGTACACGTCT-GAAAGACCCTTTGCCTG-ATCAGGACAAAACAATGACCAAT 105547 || | || | || ||| | || |||| || | ||| || || | | | ||||| Sbjct 372757 TCATCGCCCCAAACATCTTGCAATCCCCT--GCATTCATCTGGGCACATTAGAGTCCAAT 372700 Query 105548 TACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAAGAGGT 105607 ||| ||||| | || |||||||| ||| |||| ||| | ||| | |||||| | Sbjct 372699 CTTGATCCTTCTCAACTCTTTCCATGAACAGATCAGGAACCCAAAGGGCAGGAAAGAGAT 372640 Query 105608 CTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATAT 105667 | ||||| ||| |||||| | || |||||| | ||||| | ||| || | || || Sbjct 372639 CGCGACATCTCATCTCTTCCTTTCCGTGATTCTTCCTGATTTCAATAAACTCTACAACAT 372580 Query 105668 CGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCTTTACGACGCCCCGC---TTGAT 105724 | ||||||| || || ||||| | |||||| | |||||||| ||| | ||||| Sbjct 372579 CAACGTGCCACGGCTCCAAATAAATTGCAATGGCACCTTTACGCTTCCCTCCACCTTGAT 372520 Query 105725 TGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGATGTTC 105784 | ||| || || || ||||| || || | ||| ||||| | |||| ||| | | Sbjct 372519 CAATATACCTAGCAGTGTCATTATAAACGCGCAGCATCGGAATTAATCCATTAGATCTCC 372460 Query 105785 CATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCAATAC 105844 |||||||||| ||||||| ||| | || | | | || || | ||||| || Sbjct 372459 CATTTGTTCCTCGAATATATGAACCAGTTCCTCTAATATTACTCACTGCCACCCCAAGAC 372400 Query 105845 CCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATAC 105904 | || || |||||| || || || | ||| ||| || | ||||||| || Sbjct 372399 CACCCGCAGTCTTACTAATGTTTGCGCATTTAGTTAGTGTGTCAAAGATACCGTTTATTG 372340 Query 105905 TATCTTCCTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTGGGTGTACCAGCAT 105964 |||||| | || | | ||||| ||||||||||| |||| || || || | || Sbjct 372339 AATCTTCTGGAATCCTGAGTAAAAAACAAGATGACATTTGAGGTCGTGGAGTGCCTGAAT 372280 Query 105965 TGAACAGAGTTGGTGTTGCATGAATGAACAAACCTTTCGATAACGCTTCGTATGTTTCCA 106024 | || || || |||||||||||| | || | || ||||||| || |||||||| | Sbjct 372279 TAAAGAGTGTGGGTGTTGCATGAGTAAAATATTTTTGCGATAACAACTCATATGTTTCAA 372220 Query 106025 GGACGTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCATATAGAGATATTGGG 106084 | | |||||||| | |||||||||| || ||| ||||| |||| ||| | Sbjct 372219 GTGCAGCTTCAATATCACCACAATGAATACCACAAGAGACCCGCATCAGAAGATGTTGTG 372160 Query 106085 GTGTTTCAATAATTTCACCGTCAATTTTCTGGAGATACCCTTTTTCAAGTGTTTTTAAAC 106144 || |||| | || || ||||||||| | ||||| | |||| || ||||| || Sbjct 372159 GTCTTTCCACAACTTTGTTGTCAATTTTAAGAAGATAGGATCTTTCTAGAGTTTTGAAGG 372100 Query 106145 CAAAATACCCAAACTCAAAATC 106166 ||||||| | | |||||||| Sbjct 372099 CAAAATAATCGTATTCAAAATC 372078 >seq9 Length=398675 Score = 165 bits (182), Expect = 1e-35 Identities = 338/499 (68%), Gaps = 9/499 (2%) Strand=Plus/Minus Query 183161 CCGGTACCAATACCTTCAGTTCCATTTACCAAAACGGTCGGTAATATAGGAACATAATAG 183220 || |||||||| || ||||| ||||||||||||| | || | ||| ||||| ||||| Sbjct 216789 CCTGTACCAATTCCATCAGTACCATTTACCAAAATCATTGGAATTATTGGAACGTAATAT 216730 Query 183221 TCAGGTTCGATTTGTTTACCGTCGTCGTCGAGATAGTTTAATACTGGATCATC----TTT 183276 |||||| ||||||| || || || | | ||| |||||| |||||||| | | Sbjct 216729 AAAGGTTCAATTTGTTGTCCATCATCATATAAATAAGTTAATAAAGGATCATCAGCCTCT 216670 Query 183277 GGGATCAAAAAGTATTCTCGCGTTTTTAGTCAATTTTGTAAATATATACCTGGTTTGACT 183336 |||| ||| ||| || | ||||| | || ||||||||||| | | ||| Sbjct 216669 GGGA---AAATATAT-CTAGTCCATTTAGATAGCTTAGTAAATATATAACGAGCAGCACT 216614 Query 183337 CGCGTCTTTACCACCCATGAGACGTGTACCAAATTGACCACATGGTTCGAGTAAATTAAT 183396 || ||||| ||||| | |||||||||||||||||||||| | || ||| | Sbjct 216613 TGCATCTTTTCCACCTTCTTTTCTACTACCAAATTGACCACATGGTTCTAATAGATTTAG 216554 Query 183397 ATTATTCGACCCCGTAAAATTATGTGCTAATTTTACAATTGTATCTGCCAAAGAGACTTC 183456 |||||| || |||||| || || | || ||||| ||| | ||| || ||| Sbjct 216553 ATTATTACTTCCAACAAAATTTTGAGCCATATTAACAATAGTACTTTGCAATGATGATTC 216494 Query 183457 ACCGTGGTGATACGATGTTTTTTCCGAAACGTATGCGGCTAATTGCGCAACCTTCATTTC 183516 || || ||||| | | | ||| | ||| || | |||||||| ||||| || | ||| Sbjct 216493 TCCATGATGATAAGCACTATGTTCAGCAACATAACCAGCTAATTGTGCAACTTTAAGTTC 216434 Query 183517 AGATGTAAGATTCTTTGTGAAACACGCGTATAACACTTTTCGTTGGGATGGTTTTAAACC 183576 | |||| || ||| | || || | | ||||||| ||| ||||||||||| Sbjct 216433 ATTATTAAGCTTTTTTTTAAATGTTGCAAAAAGTACTTTTCTTTGTCCAGGTTTTAAACC 216374 Query 183577 ATCTGAAACGTGTGCAATCGACCTTTTCAAATCAGCAAGACTGAAATTTACAAGATCTTT 183636 |||| | | | || ||| || || | |||| ||| || |||||| ||||| Sbjct 216373 ATCTAATAAATTTGGAATAGATCTAGTAGTATCATATCTACTAAATAATACAAGTTCTTT 216314 Query 183637 ATGAATAAAATCAGAAATA 183655 ||||||||||||| ||||| Sbjct 216313 ATGAATAAAATCA-AAATA 216296 >seq4 Length=1031078 Score = 107 bits (118), Expect = 2e-18 Identities = 210/303 (69%), Gaps = 13/303 (4%) Strand=Plus/Plus Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 |||| ||||||| ||| ||||||||||||| ||| || | || | |||||| | ||| Sbjct 785612 GCACCAACATTCATAATTCCATTTGCATCAATATCAAAGGTGACTTCAATTTGAG--GTA 785669 Query 6749 CCCCTC--GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCG 6806 |||||| ||||| | ||||| ||| | | |||||| ||||| || | ||||| | Sbjct 785670 CCCCTCTGGGTGCTGGAGGAATTCCCATCATTTCAAATTGTCCAAGCAACTTATTATCAG 785729 Query 6807 TCGC--CTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTG 6864 || |||| | ||| |||| | ||||||||| || || |||||| ||| Sbjct 785730 CAGCAAATTCT--CTTTCTCCTTGGAAAACTTTAATTCCAACTTGAGTTTGATTGTCTGC 785787 Query 6865 TGCCGTTGAGAAGA-TTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCG 6923 || || ||||| | || | ||||| |||| || || || |||||||| ||| | Sbjct 785788 AGCAGTGGAGAATACTTGGCTCTTT-TTAGTAGGTATTGTGGTATTTCTGTTAATTAATC 785846 Query 6924 GGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTA 6983 | || | || ||||||| |||||| | || | ||| | ||||| ||||| ||||| Sbjct 785847 GAGTAAAAACTCCACCCAAAGTTTCAATACCTAAAGATAAGGGTGTAACGTC---GAGTA 785903 Query 6984 ACA 6986 ||| Sbjct 785904 ACA 785906 Score = 86.0 bits (94), Expect = 8e-12 Identities = 197/291 (68%), Gaps = 8/291 (3%) Strand=Plus/Plus Query 7493 GTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCA 7552 || ||||| |||||||| | || || ||| | ||| | |||| ||| || ||||| Sbjct 786413 GTTGCTTTAACTTCAAACACTCCGCCAAGAATCTCTAAAATAGAAATATCGAAAGTACCT 786472 Query 7553 CCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTAC 7612 || |||| ||| ||| | || | || | | | ||| | | || || | ||||| Sbjct 786473 CCTCCCAAATCATAAAC---TGCGATTGTTTTGCCATCT--GCTTTT-TCCATTCCGTAT 786526 Query 7613 GCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGT 7671 || | |||||| || ||||| |||||||| || | ||| || || || || |||| Sbjct 786527 GCAAGAGCCGCTGCTGTTGGCTCATTAATGATTCTTGTTACATTTAAG-CCTGCTATAGA 786585 Query 7672 TGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGAC 7731 | ||||| || || ||||| || || ||||| |||||||| || || || || | || Sbjct 786586 GCCAGCATCCTTAGTTGCTTGACGCTGAGAATCATTAAAGTAAGCTGGCACAGTAATAAC 786645 Query 7732 CGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTT 7782 || | | | || |||| ||||| | ||| || | ||||||||||| Sbjct 786646 AGCATGCTTTACACCTCTACCAAGATAAGTTTCGGCAGTTTCTTTCATTTT 786696 >seq6 Length=895510 Score = 91.5 bits (100), Expect = 2e-13 Identities = 168/241 (70%), Gaps = 9/241 (4%) Strand=Plus/Plus Query 11445 TTTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACG--GTTGATTTTCACGT 11502 |||||| |||| |||||||||||||| ||||| | ||||| | | | ||||| | | Sbjct 759691 TTTCTT-CCAACTGCATCAATTTCATCAATAAAAACAATACTTGGAGATAATTTT--CTT 759747 Query 11503 GCCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAAC 11562 ||| | ||||| || | ||||| |||| || | || ||||| || |||| || Sbjct 759748 GCCTGTGAAAATAATTCTCTTACTCTACTTGCACCCATTCCAACAAAAATCTCAATAAA- 759806 Query 11563 GATGAC--CCCGAACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTA 11620 || || || || | || ||| || || || |||||| || | ||| ||| | Sbjct 759807 -ATCACTTCCAGATATATAAAAAAATGGTACATTAGCTTCACCAGCAACAGCTTTTGCCA 759865 Query 11621 AAAGTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCAC 11680 | | ||||||||| ||||||||| ||| ||||| ||||| |||||||||| |||| Sbjct 759866 ATAATGTTTTACCGGTACCTGGTGGTCCTACCAATAAAGCACCTTTTGGTATTTTTGCAC 759925 Query 11681 C 11681 | Sbjct 759926 C 759926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132657095120