Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001305435.1_202015-10- 01] 18 sequences; 9,283,240 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq9 95.1 2e-14 >seq9 Length=398675 Score = 95.1 bits (104), Expect = 2e-14 Identities = 145/202 (72%), Gaps = 10/202 (5%) Strand=Plus/Plus Query 165161 TTAAAGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAACATGGTGAA- 165219 |||||||||| |||||| ||| |||||||| ||||| | | |||| | ||||| ||| Sbjct 216438 TTAAAGTTGCACAATTAGCTGGTTATGTTGCTGAACATAGTGCTTATCATCATGGAGAAT 216497 Query 165220 CAAAATTT--ATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATA 165277 || ||| | || ||||| |||| | || ||| |||||||||| | |||||| Sbjct 216498 CATCATTGCAAAGT---ACTATTGTTAATATGGCTCAAAATTTTGTTGGAAGTAATAATC 216554 Query 165278 TAGCATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTC-- 165335 || || | ||||| |||||||||||||| ||| |||||| || |||||| | Sbjct 216555 TAAATCTATTAGAACCATGTGGTCAATTTGGTAGTAGAAAAGAAGGTGGAAAAGATGCAA 216614 Query 165336 -TGCGGCATCAAGATATATTTA 165356 ||| || || ||||||||| Sbjct 216615 GTGCTGC-TCGTTATATATTTA 216635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628531058580480