Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001305435.1_202015-10- 01] 18 sequences; 9,283,240 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq7 178 3e-39 seq1 152 1e-31 >seq7 Length=866811 Score = 178 bits (196), Expect = 3e-39 Identities = 163/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 282897 TGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGT 282956 ||||| ||| |||||||| |||||||| |||| || || | |||||||||| |||| Sbjct 571018 TGTAAAGTGGACTCTTTTTGAATGTTGTAATCAGAGAGAGTTCTACCATCCTCTAATTGT 570959 Query 282957 TTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTT 283016 || || |||||||||||||||||||| ||| || || || ||||| ||||| |||||| Sbjct 570958 TTTCCTGCAAAGATCAAACGTTGTTGATCAGGTGGGATTCCTTCCTTATCTTGAATCTTT 570899 Query 283017 GCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTC 283076 || || || | || || || || |||| ||| ||||| | |||||| ||||| || ||| Sbjct 570898 GCCTTAACATTCTCAATTGTATCTGAAGGTTCAACTTCCAAAGTGATAGTCTTTCCTGTC 570839 Query 283077 AAAGTCTTAACGAATATCTGCATTTT 283102 ||||||||||| || |||||||| || Sbjct 570838 AAAGTCTTAACAAAAATCTGCATATT 570813 >seq1 Length=1284088 Score = 152 bits (168), Expect = 1e-31 Identities = 162/214 (76%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 282890 TACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTC 282949 ||| | ||| || ||| || || ||||| |||||||||| || || | ||||| || Sbjct 551491 TACTAAATGCAAAGTGGACTCCTTCTGGATATTGTAGTCAGATAGAGTTCTACCATCTTC 551550 Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009 | ||| || || |||||||||| ||| ||||| ||| |||||||||||||| || || Sbjct 551551 CAATTGCTTTCCAGCAAAGATCAGACGCTGTTGATCAGGAGGAATACCCTCCTTATCCTG 551610 Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069 ||||||||| ||||| | || ||||| || |||| ||| ||||| | ||||| ||||| Sbjct 551611 GATCTTTGCCTTTACATTCTCAATAGTATCGGAAGGTTCAACTTCCAATGTGATGGTCTT 551670 Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103 || || ||||| || || || || ||||| ||| Sbjct 551671 TCCTGTTAAAGTTTTGACAAAAATTTGCATCTTC 551704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738958595772